Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00934
(417 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 111 2e-25
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 8e-24
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 76 1e-14
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 58 2e-09
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.023
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.054
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.22
SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8) 29 1.2
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 29 1.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_34814| Best HMM Match : DUF1685 (HMM E-Value=4.3) 29 2.0
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 28 3.6
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042) 28 3.6
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 3.6
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 27 4.7
SB_48270| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_37539| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_3971| Best HMM Match : UPF0058 (HMM E-Value=5.6) 27 6.2
SB_53875| Best HMM Match : Glu_synthase (HMM E-Value=0) 27 8.2
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 27 8.2
SB_20795| Best HMM Match : Amelogenin (HMM E-Value=1) 27 8.2
SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 111 bits (268), Expect = 2e-25
Identities = 47/73 (64%), Positives = 63/73 (86%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N+LESY +SMKST+ED+K+K+KIS+ DK+ ILDKC +KWLD+NQ A+K+E+E+ QKEL
Sbjct: 542 NSLESYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEKDEFEYHQKEL 601
Query: 181 EGIYNPIITKMYQ 219
E + NPIITK+YQ
Sbjct: 602 EKVCNPIITKLYQ 614
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 106 bits (254), Expect = 8e-24
Identities = 44/73 (60%), Positives = 61/73 (83%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N+LESY FSMKSTMEDEK+K+K+S+ +++ ++ +C AT+ WL+ NQ A+KEE + QKEL
Sbjct: 634 NSLESYAFSMKSTMEDEKVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEIDAHQKEL 693
Query: 181 EGIYNPIITKMYQ 219
EG+ NPIITK+YQ
Sbjct: 694 EGVCNPIITKLYQ 706
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 76.2 bits (179), Expect = 1e-14
Identities = 31/72 (43%), Positives = 50/72 (69%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N LESY F +KS + + L+ K+S SDK T+ +K + WL+ N LA+KEE+E ++KEL
Sbjct: 541 NRLESYAFGVKSAISEPSLEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEEFEEQEKEL 600
Query: 181 EGIYNPIITKMY 216
+ + +PI+ K++
Sbjct: 601 QRVCSPIMAKVH 612
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 58.4 bits (135), Expect = 2e-09
Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
N LESY +S+K+ + D EKL K+S+ DK+TI + I W+D NQ A E+++ ++++
Sbjct: 1235 NELESYAYSLKNQVGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDASVEDFKKEKRK 1294
Query: 178 LEGIYNP 198
+ +Y+P
Sbjct: 1295 WKMLYSP 1301
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 35.1 bits (77), Expect = 0.023
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKIS-DSDKQTILDKCNATIKWLDSN 135
NALES+ F ++ M E L EK+S +++++TI + A WLD +
Sbjct: 721 NALESHIFGVRDEMNSE-LGEKLSTEAERETISEALTAASDWLDED 765
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 33.9 bits (74), Expect = 0.054
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Frame = +1
Query: 25 SMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSN------QLADK-EEYEHKQKELE 183
S K ++ +K ++ D +K+ +++C ATIK LDSN Q+AD+ EE + ++ELE
Sbjct: 174 SNKLVVDLQKTRKAQDDCEKE--VNRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELE 231
Query: 184 GI 189
+
Sbjct: 232 SV 233
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 31.9 bits (69), Expect = 0.22
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 28 MKSTMEDEKLKEKISDSDKQTILDKCNATIKW-LDSNQLADKEEYEHKQKELEGIYNPII 204
+++ + EK K + D +++ L + T+K+ LD +LA KE++ +KE EG +
Sbjct: 100 VENDRDSEKHKRDLRDKEQE--LSELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMD 156
Query: 205 TKM 213
TKM
Sbjct: 157 TKM 159
>SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8)
Length = 82
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 31 KSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
K T ED++ ++K ++SD Q + N T K +L + +E K+ EL
Sbjct: 33 KVTQEDQEPEKKSNESDPQKDQETDNKTSKKESQEELREADETPKKKDEL 82
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPPSRRSIKP-TFHTTLKPTCNNHLVTSP 390
P+P+ PPPG PPS + P T +P VT P
Sbjct: 28 PKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQPPVTQP 69
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 43 EDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELE 183
E E +KE + +++++ KC T K LD+++ D+E+ E Q+E E
Sbjct: 1077 EHETMKESLLNANREIGRLKCENTAKNLDADRKEDQED-EEVQREGE 1122
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 25 SMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQ 171
S++ ++ E+ EK ++T D+ N TI +L+ EE++HK+
Sbjct: 1684 SVREALDSER--EKWRKEYEKTTQDEINKTISYLEDQYTRGLEEFKHKE 1730
>SB_34814| Best HMM Match : DUF1685 (HMM E-Value=4.3)
Length = 330
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 25 SMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQK 174
S K TME E K ++K L AT WL + DK++ E K
Sbjct: 65 SSKGTMESEPAV-KAKGANKHLTLQNARATENWLRVKNVLDKQKKEISSK 113
>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1615
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 13 SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEY-EHKQKELEGI 189
SY K + EK KEK + +K+ ILD A K++ N + E+ E + ELE I
Sbjct: 1099 SYKSCPKLRKKREKEKEKDKEKEKEVILD-FEALDKFIGRNPMTQIAEFREAEAAELEAI 1157
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
+AL+ Y + ++ EKLKE I D K +LD+ ++W+ + ++ + ++KE
Sbjct: 852 SALDLYVLIPPANIK-EKLKEDIHDPHK--VLDRVKYRVEWVKHQEKEKQKLEDEREKE 907
>SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 31 KSTMEDEKLKEKISDSDKQTILDKCNAT 114
+S EDEK+ SDS+ + LD C+ T
Sbjct: 257 RSASEDEKISLHFSDSEGSSSLDHCSLT 284
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPPSRRS--IKPTFHTTLKPTCNNHLVTSP*LK*INIE 414
P P PPPG E PP + + PT P V+ P K N++
Sbjct: 132 PPPVTPPPGPETPPPPDTPAPPVPPTEAPPTAPPTGGSCVSKPPYKSANMD 182
>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
Length = 1558
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 46 DEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGIYNP 198
DE+ E++ ++ Q D A ++ D Q A++ +Y ++ +EL+G NP
Sbjct: 235 DERAHEELHNTAHQKFTD---AITRFFDKLQ-AEETKYNNRMEELQGALNP 281
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +1
Query: 268 PEPEVPPPGLE-ALAPPSRRSIKPTFH 345
P P PPP L A APP R P H
Sbjct: 425 PPPPPPPPALRLACAPPRLRFTSPVLH 451
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 43 EDEKLKEKISDSDK-QTILDKCNATIKWLDSNQLADKEEYEHKQKELEGIYNPII 204
++E L++++S+ ++ Q ++++ N T+K L +K+E K L+ +N ++
Sbjct: 31 DNESLQKRVSELEEHQKVIEETNETLKKQHETVLFEKDELTLTIKTLQEEFNTML 85
>SB_48270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = +1
Query: 10 ESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGI 189
ESYC + K + S DK+T K K +D+ L K + + K LE
Sbjct: 49 ESYCKAGKPEVNSNNNNNLFSVDDKRTTFIKKLMGDKTIDAESLRLKAAMKEQYKALEQK 108
Query: 190 YNPIITKMYQ 219
Y + K Q
Sbjct: 109 YKKLQEKCDQ 118
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 31 KSTMEDEKLKEKISDSDK-------QTILDKCNATIKWLDSNQLADKEEYEHKQ 171
K T + EK KEKI +K QT+LDK + + + +L K ++HK+
Sbjct: 837 KGTEKQEKEKEKIQKEEKEPEKSKVQTLLDKLHRQARVEEEVKLVLKVYFKHKE 890
>SB_37539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 27.1 bits (57), Expect = 6.2
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 43 EDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGIYNPIITK 210
++ KLK K D D + LDK K SN E K L+GI P I+K
Sbjct: 123 QEVKLKVKYFDGDGEVQLDKVWTLDKLPISNLSIPSSEDIRKCSHLQGIDFPEISK 178
>SB_3971| Best HMM Match : UPF0058 (HMM E-Value=5.6)
Length = 132
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 34 STMEDEKLKEKISDSDKQTIL-----DKCNATIKWLDSNQLADKEEYEHKQKELEGIYNP 198
S + + +E + D K +I+ D+ + KW+ N E Y+H + ++ YNP
Sbjct: 62 SVTQIHRFEENVFDFLKASIIKSFKDDERRSQSKWIKENVPETSEVYDHILETVQNRYNP 121
Query: 199 II 204
I
Sbjct: 122 EI 123
>SB_53875| Best HMM Match : Glu_synthase (HMM E-Value=0)
Length = 911
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 259 AEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 387
+E P P P A PPSR S++P T+L +N L+ +
Sbjct: 814 SEFPAPTEEPCTTTAQRPPSRPSLEP-LATSLFNVLDNELIAA 855
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 220 PGTSS*LSDCKCLPILSACAHTPPCRPAG 134
PGT + KC+ +L C P C PAG
Sbjct: 2968 PGTYQCADNRKCISVLEVCDGIPSC-PAG 2995
>SB_20795| Best HMM Match : Amelogenin (HMM E-Value=1)
Length = 630
Score = 26.6 bits (56), Expect = 8.2
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 416 GSIFIYFNQGEVTRWLLQVGLSVVWN 339
G+ +Y G+ +WL +VG+ W+
Sbjct: 604 GNRIVYVTSGKYLKWLPEVGIDASWD 629
>SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 49 EKLKEKISDSDKQTILDKCNATIKWLDSNQ 138
EK + QT+LDKC +WL +N+
Sbjct: 152 EKSDPSLLTEVNQTLLDKCQYIEEWLTANE 181
>SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 295 LEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 387
L+ P S S +PT TL CNN TS
Sbjct: 438 LKCTVPTSSVSSRPTVAVTLNGGCNNFTTTS 468
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,914,488
Number of Sequences: 59808
Number of extensions: 239227
Number of successful extensions: 1134
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 777158991
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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