Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00934
(417 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 112 1e-25
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 102 9e-23
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 67 6e-12
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 66 1e-11
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 66 1e-11
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 65 2e-11
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 60 6e-10
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 32 0.15
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 32 0.15
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 31 0.44
AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical... 29 1.4
U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical pr... 29 1.8
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 1.8
U53338-7|AAA96195.2| 342|Caenorhabditis elegans Lunapark (membr... 28 2.4
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 28 2.4
Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical p... 28 3.1
Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical p... 28 3.1
Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical p... 28 3.1
Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical p... 28 3.1
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 28 3.1
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 27 4.1
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 27 4.1
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 27 4.1
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 27 5.5
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 5.5
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 5.5
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 27 5.5
Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical pr... 27 7.2
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 27 7.2
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 26 9.5
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 26 9.5
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 26 9.5
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 26 9.5
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 26 9.5
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ... 26 9.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 26 9.5
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 112 bits (269), Expect = 1e-25
Identities = 48/73 (65%), Positives = 62/73 (84%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N LESY F++K T+EDEKLK+KIS DK+ I DKC+ +KWLDSNQ A+KEE+EH+QK+L
Sbjct: 541 NGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDL 600
Query: 181 EGIYNPIITKMYQ 219
EG+ NPII+K+YQ
Sbjct: 601 EGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 102 bits (245), Expect = 9e-23
Identities = 44/73 (60%), Positives = 59/73 (80%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N LESY F++K T+EDEKLK+KIS DK+ I DKC+ +KWLDSNQ A+KEE+E +QK+L
Sbjct: 541 NGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDL 600
Query: 181 EGIYNPIITKMYQ 219
EG+ P ++K+YQ
Sbjct: 601 EGLAKPDLSKLYQ 613
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 66.9 bits (156), Expect = 6e-12
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
N LE+Y + MK+ + D EKL K++D DK +I I+WL SNQ A EE + ++KE
Sbjct: 565 NELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKE 624
Query: 178 LEGIYNPIITKMY 216
LE + PI++K+Y
Sbjct: 625 LESVVQPIVSKLY 637
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
N LESY +++K+ +ED EKL K+ + DK+TI + I WL SN A EE + ++K+
Sbjct: 568 NELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKD 627
Query: 178 LEGIYNPIITKMYQ 219
LE PI++K+Y+
Sbjct: 628 LESKVQPIVSKLYK 641
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
N LESY +++K+ +ED EKL K+ + DK+TI + I WL SN A EE + ++K+
Sbjct: 568 NELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKD 627
Query: 178 LEGIYNPIITKMYQ 219
LE PI++K+Y+
Sbjct: 628 LESKVQPIVSKLYK 641
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 65.3 bits (152), Expect = 2e-11
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
N LE+Y + +K+ + D EKL K++D DK +I I+WL SNQ A EE + ++KE
Sbjct: 196 NELEAYAYQIKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKE 255
Query: 178 LEGIYNPIITKMY 216
LE + PI++K+Y
Sbjct: 256 LESVVQPIVSKLY 268
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 64.1 bits (149), Expect = 4e-11
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N LE+Y F +K +++ K+S D + + T++WLDSN LA+K+E E K KEL
Sbjct: 541 NQLEAYAFQIKQALDE--YSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKEL 598
Query: 181 EGIYNPIITKMYQ 219
+ + I+TKM+Q
Sbjct: 599 KSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 64.1 bits (149), Expect = 4e-11
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N LE+Y F +K +++ K+S D + + T++WLDSN LA+K+E E K KEL
Sbjct: 541 NQLEAYAFQIKQALDE--YSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKEL 598
Query: 181 EGIYNPIITKMYQ 219
+ + I+TKM+Q
Sbjct: 599 KSVCQSILTKMHQ 611
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 60.1 bits (139), Expect = 6e-10
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N LE+Y F +K +E+ +S D + D T++W++ N LADK+E E K KEL
Sbjct: 541 NQLEAYAFQVKQALEEHG--SLLSAEDAKRAKDAVEDTLRWMERNTLADKDEIEAKDKEL 598
Query: 181 EGIYNPIITKMYQ 219
+ I I+TKM+Q
Sbjct: 599 KSICQDILTKMHQ 611
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 262 EHPEPEVPPPGLEALAPPSRRSIKPTF 342
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 262 EHPEPEVPPPGLEALAPPSRRSIKPTF 342
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 30.7 bits (66), Expect = 0.44
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 19 CFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADK---EEYEHKQKELEG 186
CF +K T +EKLK ++ DK+ + K + +K L + ++ + YE K +E G
Sbjct: 360 CFLLKMTSLEEKLKS--AEEDKKLAVKKAMSLVKELQKSLKEERKRADSYERKSEERAG 416
>AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical
protein Y71G12B.10 protein.
Length = 318
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 52 KLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGIYNPII 204
+L +++S+ QT+ + KW+ QLAD E K + EG+ P++
Sbjct: 44 ELIDRLSECGFQTVETTSFVSPKWVP--QLADHNEIVKKHRRFEGVSYPVL 92
>U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical
protein F54H5.5 protein.
Length = 662
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIK 120
NA++ Y SM + +DE LK K+ D + C T+K
Sbjct: 265 NAIQEYVSSMSTHFKDEILKAKLPPMDASRFI--CGVTLK 302
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N LES+ F +E+ + + ++D +K + D WL+ + D + L
Sbjct: 698 NELESFNFECSQYLEETEFTDYMADEEKTKLEDSVKRIRAWLEDDVTKDTPTKDFTDNLL 757
Query: 181 E 183
E
Sbjct: 758 E 758
>U53338-7|AAA96195.2| 342|Caenorhabditis elegans Lunapark (membrane
protein) homologprotein 1 protein.
Length = 342
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 22 FSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEE 156
FS ++ +KL+ IS K T+LD T+K+ ++ ++ D+ E
Sbjct: 93 FSWRTNRTTQKLENAISQ--KTTLLDLVKETLKFKEAKEILDRYE 135
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 40 MEDEKLK-EKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
+EDE+L+ E I D D+ + + + +K LD++ +EE ++KE
Sbjct: 130 LEDEELEDEMIDDEDEADLFNLSESDLKTLDADLKKMEEEEAGEEKE 176
>Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical
protein F13B10.1d protein.
Length = 343
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 256 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 351
R E P P P G + A +RR I+P+ TT
Sbjct: 308 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 339
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 256 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 351
R E P P P G + A +RR I+P+ TT
Sbjct: 551 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 582
>Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 253 FRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHL-VTSP 390
F P PP G + P + + KPT TT+KPT L +TSP
Sbjct: 57 FETSGPSQNQPPIGNDGEETP-KPTPKPTTTTTVKPTSPTTLKMTSP 102
>Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 253 FRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHL-VTSP 390
F P PP G + P + + KPT TT+KPT L +TSP
Sbjct: 54 FETSGPSQNQPPIGNDGEETP-KPTPKPTTTTTVKPTSPTTLKMTSP 99
>Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 253 FRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHL-VTSP 390
F P PP G + P + + KPT TT+KPT L +TSP
Sbjct: 57 FETSGPSQNQPPIGNDGEETP-KPTPKPTTTTTVKPTSPTTLKMTSP 102
>Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 253 FRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHL-VTSP 390
F P PP G + P + + KPT TT+KPT L +TSP
Sbjct: 54 FETSGPSQNQPPIGNDGEETP-KPTPKPTTTTTVKPTSPTTLKMTSP 99
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 256 RAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 351
R P+P+ PPP L PP RR S + T TT
Sbjct: 680 RDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 256 RAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 351
R P+P+ PPP L PP RR S + T TT
Sbjct: 680 RDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 16 YCFSMKSTMEDEKLKEKISDSDKQTILDKCNAT-IKW 123
+C+S KS++ EK++ +I + T+L K N +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 16 YCFSMKSTMEDEKLKEKISDSDKQTILDKCNAT-IKW 123
+C+S KS++ EK++ +I + T+L K N +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 111 HHQVAGFQPAGRQGGV*AQAERIGRHLQSDNYEDVPGCRRSPRR 242
H V G G+ +Q +I + + NY+ +P CR +PRR
Sbjct: 18 HLPVQGPSTIASSNGLRSQQSKIIKRPPT-NYKSIPACRLAPRR 60
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 16 YCFSMKSTMEDEKLKEKISDSDKQTILDKCNAT-IKW 123
+C+S KS++ EK++ +I + T+L K N +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPP 315
P P +PPP ALAPP
Sbjct: 314 PAPSIPPPRPPALAPP 329
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 79 DKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGIYNPIITK 210
D +L K I+ L LAD++E KQK ++ I TK
Sbjct: 1042 DSMEMLRKKEKEIRELQQKVLADRDELAEKQKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 79 DKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGIYNPIITK 210
D +L K I+ L LAD++E KQK ++ I TK
Sbjct: 1042 DSMEMLRKKEKEIRELQQKVLADRDELAEKQKAIDAQEEEIQTK 1085
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPP 315
P P +PPP ALAPP
Sbjct: 314 PAPSIPPPRPPALAPP 329
>Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical
protein W07G1.3 protein.
Length = 307
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 390
PEP VPP APP+ S+ P F + + HL++ P
Sbjct: 30 PEPPVPPK----FAPPAAPSVAPNFRAS--DSAAPHLLSVP 64
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 49 EKLKEKISDSDK-QTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
+ L +K+S++++ Q +D IKW+D + E+Y E+
Sbjct: 172 DSLHKKLSENERFQKFVDNAEDLIKWMDDKEKEICEKYSKMDFEV 216
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPPSRRSIKPT 339
P + PPPG++ +P +R+ PT
Sbjct: 228 PMNDSPPPGMQQQSPERQRAFSPT 251
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +1
Query: 22 FSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELE 183
F+ ++ +EK K+K+ DK+ ++ + T K + +++E K+K E
Sbjct: 112 FNSRNGTGEEKKKKKVKKEDKKGDEEEKSTTKKRSSKKETHEEKEKSEKKKSAE 165
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 26.2 bits (55), Expect = 9.5
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 7 LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEG 186
LES C + K T ED + + + D D + D C A D++E E +KE+E
Sbjct: 494 LESACKAQKETKEDTEKRMQQIDEDAKNAED-CKAN----------DEKEMEELKKEIEM 542
Query: 187 IYNPIIT 207
+ N T
Sbjct: 543 LDNQFKT 549
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 26.2 bits (55), Expect = 9.5
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 7 LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEG 186
LES C + K T ED + + + D D + D C A D++E E +KE+E
Sbjct: 494 LESACKAQKETKEDTEKRMQQIDEDAKNAED-CKAN----------DEKEMEELKKEIEM 542
Query: 187 IYNPIIT 207
+ N T
Sbjct: 543 LDNQFKT 549
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 26.2 bits (55), Expect = 9.5
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 7 LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEG 186
LES C + K T ED + + + D D + D C A D++E E +KE+E
Sbjct: 539 LESACKAQKETKEDTEKRMQQIDEDAKNAED-CKAN----------DEKEMEELKKEIEM 587
Query: 187 IYNPIIT 207
+ N T
Sbjct: 588 LDNQFKT 594
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 34 STMEDEKLK-EKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELE 183
S E EK K EK+ + +KQ I + K L+ ++LA+++ + ++KE E
Sbjct: 88 SREEREKQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKE 138
>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
protein F28H6.4 protein.
Length = 1000
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 146 TRRSMSTSRKNWKAFT 193
T SM+ R+NWKAFT
Sbjct: 200 TELSMAPHRRNWKAFT 215
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 256 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPT 363
+A P P PPP L+A PP +K + PT
Sbjct: 82 QAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPT 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,577,696
Number of Sequences: 27780
Number of extensions: 169665
Number of successful extensions: 788
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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