Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00934
(417 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 93 9e-20
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 92 2e-19
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 90 5e-19
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 89 1e-18
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 88 2e-18
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 77 4e-15
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 75 3e-14
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 75 3e-14
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 75 3e-14
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 71 4e-13
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 39 0.001
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 33 0.058
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 32 0.18
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 30 0.72
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 30 0.72
At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase fam... 29 1.3
At5g01570.1 68418.m00072 hypothetical protein hypothetical prote... 29 1.7
At1g04930.1 68414.m00490 hydroxyproline-rich glycoprotein family... 29 1.7
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 28 2.2
At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp... 28 2.2
At5g27230.1 68418.m03248 expressed protein ; expression support... 28 2.9
At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containi... 28 2.9
At5g60030.1 68418.m07527 expressed protein 27 3.8
At3g09540.1 68416.m01133 pectate lyase family protein simliar to... 27 3.8
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 27 3.8
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 27 3.8
At5g66750.1 68418.m08414 SNF2 domain-containing protein / helica... 27 5.1
At5g08480.2 68418.m01002 VQ motif-containing protein contains PF... 27 5.1
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 27 5.1
At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase fam... 27 5.1
At3g51350.1 68416.m05622 aspartyl protease family protein contai... 27 6.7
At2g25290.1 68415.m03025 octicosapeptide/Phox/Bem1p (PB1) domain... 27 6.7
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 27 6.7
At1g68910.1 68414.m07886 expressed protein similar to Myosin hea... 27 6.7
At1g49270.1 68414.m05524 protein kinase family protein contains ... 27 6.7
At1g48100.1 68414.m05368 glycoside hydrolase family 28 protein /... 27 6.7
At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family... 26 8.9
At1g61080.1 68414.m06877 proline-rich family protein 26 8.9
At1g51140.1 68414.m05749 basic helix-loop-helix (bHLH) family pr... 26 8.9
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 92.7 bits (220), Expect = 9e-20
Identities = 39/73 (53%), Positives = 59/73 (80%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N+LE+Y ++M++T++DEKL +K++ DKQ I + TI+W++ NQLA+ +E+E+K KEL
Sbjct: 545 NSLENYAYNMRNTIKDEKLAQKLTQEDKQKIEKAIDETIEWIEGNQLAEVDEFEYKLKEL 604
Query: 181 EGIYNPIITKMYQ 219
EGI NPII+KMYQ
Sbjct: 605 EGICNPIISKMYQ 617
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 91.9 bits (218), Expect = 2e-19
Identities = 40/73 (54%), Positives = 56/73 (76%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
NALE+Y ++M++T+ DEK+ EK++ DK+ I D A I+WL++NQLA+ +E+E K KEL
Sbjct: 546 NALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKEL 605
Query: 181 EGIYNPIITKMYQ 219
E I NPII KMYQ
Sbjct: 606 ESICNPIIAKMYQ 618
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 90.2 bits (214), Expect = 5e-19
Identities = 39/73 (53%), Positives = 55/73 (75%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
NALE+Y ++M++T++DEK+ EK+ +DK+ I D I+WL+ NQLA+ +E+E K KEL
Sbjct: 546 NALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKEL 605
Query: 181 EGIYNPIITKMYQ 219
E I NPII KMYQ
Sbjct: 606 ESICNPIIAKMYQ 618
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 88.6 bits (210), Expect = 1e-18
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
NALE+Y ++M++T+ DEK+ EK+ +DK+ + D I+WLD NQL + +E+E K KEL
Sbjct: 546 NALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKEL 605
Query: 181 EGIYNPIITKMYQ 219
E + NPII KMYQ
Sbjct: 606 ESVCNPIIAKMYQ 618
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 88.2 bits (209), Expect = 2e-18
Identities = 37/73 (50%), Positives = 55/73 (75%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
NALE+Y ++M++T++DEK+ K+ +DK+ I D + I+WLD NQLA+ +E+E K KEL
Sbjct: 546 NALENYAYNMRNTIKDEKIASKLDAADKKKIEDAIDQAIEWLDGNQLAEADEFEDKMKEL 605
Query: 181 EGIYNPIITKMYQ 219
E + NPII +MYQ
Sbjct: 606 ESLCNPIIARMYQ 618
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 77.4 bits (182), Expect = 4e-15
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N LE+Y +++ +T+ D + EK+ +DK+ D I+WLD NQLA+ +E+EHK KEL
Sbjct: 546 NGLENYAYNVGNTLRD--MGEKLPAADKKKFEDSIEEVIQWLDDNQLAEADEFEHKMKEL 603
Query: 181 EGIYNPIITKMYQ 219
E +++ IITKMYQ
Sbjct: 604 ESVWSTIITKMYQ 616
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 74.5 bits (175), Expect = 3e-14
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
NALE+Y ++MK+ + D +KL +K+ +K+ I ++WLD NQ ++KEEY+ K KE
Sbjct: 516 NALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKE 575
Query: 178 LEGIYNPIITKMYQ 219
+E + NPIIT +YQ
Sbjct: 576 VEAVCNPIITAVYQ 589
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 74.5 bits (175), Expect = 3e-14
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
NALE+Y ++MK+ + D +KL +K+ +K+ I ++WLD NQ ++KEEY+ K KE
Sbjct: 571 NALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKE 630
Query: 178 LEGIYNPIITKMYQ 219
+E + NPIIT +YQ
Sbjct: 631 VEAVCNPIITAVYQ 644
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 74.5 bits (175), Expect = 3e-14
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
NALE+Y ++MK+ + D +KL +K+ +K+ I ++WLD NQ ++KEEY+ K KE
Sbjct: 571 NALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKE 630
Query: 178 LEGIYNPIITKMYQ 219
+E + NPIIT +YQ
Sbjct: 631 VEAVCNPIITAVYQ 644
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 70.5 bits (165), Expect = 4e-13
Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
N LE+Y ++MKST+ D EKL +KISD DK+ + ++WL+ N A+KE+Y+ K KE
Sbjct: 585 NKLETYVYNMKSTVADKEKLAKKISDEDKEKMEGVLKEALEWLEENVNAEKEDYDEKLKE 644
Query: 178 LEGIYNPIITKMYQ 219
+E + +P+I +Y+
Sbjct: 645 VELVCDPVIKSVYE 658
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWL-DSNQLADKEEYEHKQKE 177
NA+ESY + M++ + D K +E I+DS+++ L WL + + K Y K +E
Sbjct: 624 NAVESYVYDMRNKLSD-KYQEYITDSEREAFLANLQEVEDWLYEDGEDETKGVYVAKLEE 682
Query: 178 LEGIYNPI 201
L+ + +P+
Sbjct: 683 LKKVGDPV 690
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 33.5 bits (73), Expect = 0.058
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWL-DSNQLADKEEYEHKQKE 177
N LESY ++ K +E + ++ + +++ ++K + WL + A+ E+E +
Sbjct: 664 NNLESYIYATKEKLETPEFEKISTQEERKAFVEKLDEVQDWLYMDGEDANATEFEKRLDS 723
Query: 178 LEGIYNPI 201
L+ I +PI
Sbjct: 724 LKAIGSPI 731
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 31.9 bits (69), Expect = 0.18
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 40 MEDEKLKEKI--SDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGIYNPII 204
M + LKEK+ S +D T+L++C ++W D +Q K++ E +KELE + +I
Sbjct: 247 MPPKDLKEKLRKSAADLTTVLERCLHRLEW-DRSQEQQKKK-EEDEKELERVQMAMI 301
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.9 bits (64), Expect = 0.72
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N +E + K +E EK KEK +S D K +S Q+ KE + K+ EL
Sbjct: 730 NGMEEKEVNGKPEVETEK-KEKKDESQDDDKDDSVEVIFKMWESCQIEKKEAFPDKKSEL 788
Query: 181 E 183
E
Sbjct: 789 E 789
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 29.9 bits (64), Expect = 0.72
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 259 AEHPEPEVPPPGLEALAPPSRRSIK-PTFHTTLKPTCNNHL 378
A HP P PPP P + S+ PT + KP N H+
Sbjct: 110 ASHPPPAPPPPASLPTFPANISSLLFPTHNKQSKPPSNGHI 150
>At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 669
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 336 WFNRPPRWWGQRLQPRGRHLRLRVLRPEARHTSGDSSGTL 217
W+ + P WWG H R+ ++ P RH G +L
Sbjct: 318 WYTQNPEWWGDVSGALLPHPRM-LMMPGGRHFDGSEDNSL 356
>At5g01570.1 68418.m00072 hypothetical protein hypothetical protein
T16O11.19 - Arabidopsis thaliana, EMBL:AC010871
Length = 157
Score = 28.7 bits (61), Expect = 1.7
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 46 DEKLKEKISDS--DKQTILDKCNATIKWLDSNQLADKEEYEHKQKELE 183
DE KE I +S D Q LD C +S ++AD+EE E QKEL+
Sbjct: 46 DEDFKE-IHESLQDLQKKLDVCKEKTDEANS-EIADEEEIERLQKELD 91
>At1g04930.1 68414.m00490 hydroxyproline-rich glycoprotein family
protein Common family member: At2g32840 [Arabidopsis
thaliana]
Length = 332
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPPSRRSIKPTFH 345
P P PPP L PP+ R I P H
Sbjct: 34 PPPSQPPPAPPPLPPPTYRPIAPLRH 59
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +1
Query: 19 CFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGI 189
C +K+ + K+++++ D D+ + L+K + I + + +KEE E K+ E E +
Sbjct: 550 CDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRLIGFEEYILDLEKEEEELKRVEKEHV 606
>At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein similar to human splicing
factor GB:CAA59494 GI:899298 from [Homo sapiens];
contains Pfam profile PF01805: Surp module
Length = 735
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 40 MEDEKLKEKISDS--DKQTILDKCNATIKWLDSNQLADKEEYEHKQKE 177
M LKEK+ S D T+L++C ++W + +E + K+KE
Sbjct: 238 MPPRDLKEKLRKSVADLTTVLERCLNRLEWDRFQEEEKNKEEDEKEKE 285
>At5g27230.1 68418.m03248 expressed protein ; expression supported
by MPSS
Length = 948
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 7 LESYCFSMKSTMEDE-KLKEKISDSDKQTILD--KCNATIKWLDSNQLADKEEYEHKQKE 177
+ESY S +S +E+ K E + +S K L+ K + +D + A + E+E K+K+
Sbjct: 42 IESYFDSTRSVLEERAKELEALEESIKVKALELEKKEKELCLIDESMKAKQSEFEKKEKD 101
Query: 178 LE 183
+
Sbjct: 102 FD 103
>At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 743
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N L CF + ++E KL E++ + + N ++KWL + +E K KEL
Sbjct: 349 NTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE--KREAVTRKVKEL 406
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 3.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 46 DEKLKEKISDSDKQTILD--KCNATIKWLDSNQLADKEEYEHKQKELE 183
DEK+KEK+ D K K + K D + + +KE+ E +QK E
Sbjct: 166 DEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAE 213
>At3g09540.1 68416.m01133 pectate lyase family protein simliar to
style development-specific protein 9612 SP:P24396 from
[Lycopersicon esculentum]
Length = 378
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 253 FRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCN 369
F E P PPP A AP S H T+ P C+
Sbjct: 17 FPGEAPNSPFPPPYTAAPAPAPAPSSPSDHHMTVGPYCH 55
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 121 WLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 219
+L SNQ + + ++EH K L+ Y P + +Y+
Sbjct: 402 YLSSNQKSIEWDHEHVYKFLKNYYGPKLVSLYK 434
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 265 HPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 360
HP P PP + PP + + P +KP
Sbjct: 59 HPHPHPHPPAKSPVKPPVKAPVSPPAKPPVKP 90
>At5g66750.1 68418.m08414 SNF2 domain-containing protein / helicase
domain-containing protein similar to
proliferation-associated SNF2-like protein [Homo
sapiens] GI:8980660; contains Pfam profiles PF00271:
Helicase conserved C-terminal domain, PF00176: SNF2
family N-terminal domain
Length = 764
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 37 TMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLAD 147
T ED+ ++ ISD+D +LD+ + TI Q A+
Sbjct: 703 TAEDKLIQTDISDADLDRLLDRSDLTITAPGETQAAE 739
>At5g08480.2 68418.m01002 VQ motif-containing protein contains
PF05678: VQ motif
Length = 173
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 265 HPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 390
H + P LE + PP S KPT T + N +L+TSP
Sbjct: 65 HERRQCMRPKLEIVKPPL--SFKPTGTTPSSKSGNTNLLTSP 104
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 KSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEY-EHKQKE 177
+ T +E KEK+ S++++ + + K S+Q KEE E K+KE
Sbjct: 291 QQTKNEEDEKEKVQSSEEESKVKESGKNEKDASSSQDESKEEKPERKKKE 340
>At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461,
Saccharopolyspora spinosa GI:15077647, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 664
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 336 WFNRPPRWWGQRLQPRGRHLRLRVLRPEARHTSG 235
W+ P WWG H R+ ++ P RH+ G
Sbjct: 318 WYTENPEWWGDVSGALLPHPRM-LMMPGDRHSDG 350
>At3g51350.1 68416.m05622 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 528
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 360
P PEV P APP RS+ PT T P
Sbjct: 464 PPPEVEAPAPSVSAPPP-RSLPPTVSATPPP 493
>At2g25290.1 68415.m03025 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein low similarity to SP|Q99614
Tetratricopeptide repeat protein 1 {Homo sapiens};
contains Pfam profiles PF00564: PB1 domain, PF00515: TPR
Domain
Length = 697
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 73 DSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKELEGIYNPII 204
D ++TIL+K A +W + E+YE K Y ++
Sbjct: 490 DGSRETILEKVEAGFEWAKNEYNKAAEKYEGAVKIKSDFYEALL 533
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains
Pfam PF00628: PHD-finger domain; contains TIGRFAMS
TIGR01053: zinc finger domain, LSD1 subclass; contains
Pfam PF00271: Helicase conserved C-terminal domain;
similar to WSSV086 (GI:19481678)[shrimp white spot
syndrome virus]; similar to nuclear protein Np95
(GI:17939938) [Mus musculus]
Length = 1299
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 256 RAEHPE-PEVPPPGLEALAPPSRRSIKP 336
R + P+ P+ PP ++ L PP ++ +KP
Sbjct: 68 RPQFPQSPQQPPQPIQTLPPPIQQQLKP 95
>At1g68910.1 68414.m07886 expressed protein similar to Myosin heavy
chain, nonmuscle type B (Cellular myosin heavy chain,
type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
(Swiss-Prot:Q27991) [Bos taurus]; contains 1
transmembrane domain
Length = 627
Score = 26.6 bits (56), Expect = 6.7
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 1 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNATIKWLDSNQLADKEEYEHKQKEL 180
N L S + M++ +ED K K ++S +T+ ++C + +S D K K L
Sbjct: 430 NMLYSAIWDMETLIEDLKSKASKAESRTETVEEQC-IVLSTTNSELNKDVSFLRQKAKSL 488
Query: 181 EGI 189
E +
Sbjct: 489 EAM 491
>At1g49270.1 68414.m05524 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 699
Score = 26.6 bits (56), Expect = 6.7
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +1
Query: 259 AEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 390
AE PE PP +PPS S TT P +N TSP
Sbjct: 2 AEGQSPENSPPAPPPPSPPSPPSSNDQ-QTTSPPPSDNQETTSP 44
>At1g48100.1 68414.m05368 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from
[Glycine max]; contains PF00295: Glycosyl hydrolases
family 28 (polygalacturonases)
Length = 475
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 265 HPEPEVPPPGLEALAPPSR 321
HP P PPP LE PP +
Sbjct: 40 HPLPPPPPPPLETANPPDQ 58
>At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family
protein sequencing discrepancy between cDNA and genomic
sequence prevents representation of entire coding
sequence
Length = 578
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 390
P +PPP + +APP +++ P ++ P SP
Sbjct: 475 PRSVMPPPPPKTIAPPPSKTMSPPSSKSMLPPPPRSKTMSP 515
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 26.2 bits (55), Expect = 8.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 259 AEHPEPEVPPPGLEALAPP 315
A P P PPPG +A PP
Sbjct: 546 AAAPPPPPPPPGTQAAPPP 564
>At1g51140.1 68414.m05749 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 379
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 268 PEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 360
P ++ PP A++P S +KP F + L P
Sbjct: 200 PRSKLLPPTSRAMSPISEVDVKPGFSSRLPP 230
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,234,478
Number of Sequences: 28952
Number of extensions: 159209
Number of successful extensions: 818
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 635399168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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