Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00933
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99709-4|CAB16855.1|  277|Caenorhabditis elegans Hypothetical pr...    81   7e-16
Z81564-1|CAB04567.1|  284|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF022981-11|AAG24207.1|  746|Caenorhabditis elegans Hypothetical...    27   7.2  
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p...    27   9.5  
U00035-4|AAA50646.2|  482|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AC098856-4|AAL27248.2|  261|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z99709-4|CAB16855.1|  277|Caenorhabditis elegans Hypothetical
           protein C47B2.4 protein.
          Length = 277

 Score = 80.6 bits (190), Expect = 7e-16
 Identities = 39/82 (47%), Positives = 51/82 (62%)
 Frame = +2

Query: 2   LQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIYPHGSVDKLPY 181
           L  L+TGR   V TA    K+ LF YQG+IGA L++GGVD TGPH+Y    +G+    P+
Sbjct: 111 LLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDPTGPHLYMCSANGTTMAFPF 170

Query: 182 ATMGSGSLAAMAVFEAGWKRDM 247
              GSGS AA+ + E  +K DM
Sbjct: 171 TAQGSGSYAAITILERDFKVDM 192


>Z81564-1|CAB04567.1|  284|Caenorhabditis elegans Hypothetical
           protein K05C4.1 protein.
          Length = 284

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   LQRLHTGRTVPVETAATLLKRMLFRYQGH-IGAALVLGGVDRTGPHIYCIYPHGSVDKLP 178
           L  L    ++ V  A+      L+ Y+G  +    ++ G D+ GP I+ +   G   +L 
Sbjct: 136 LYELREKTSITVSAASKYFANTLYGYRGQGLSVGSMVAGYDKKGPQIFKVDSEGDRCQLK 195

Query: 179 YATMGSGSLAAMAVFEAGWKRDM 247
             ++GSGSL A  + +  +K  M
Sbjct: 196 VCSVGSGSLNAYGILDNHYKPKM 218


>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
           protein C01B9.1b protein.
          Length = 1671

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 365 YWAGPVLRITHRSTLEPEPKSLNIPAAIASRTSFFPSPHS 246
           Y AGPV +I+H ST      S+N    +  +  F  +PH+
Sbjct: 190 YLAGPVQQISHLSTASCFFNSINFDDLVFLKNHFLDAPHA 229


>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
           protein C01B9.1a protein.
          Length = 1601

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 365 YWAGPVLRITHRSTLEPEPKSLNIPAAIASRTSFFPSPHS 246
           Y AGPV +I+H ST      S+N    +  +  F  +PH+
Sbjct: 120 YLAGPVQQISHLSTASCFFNSINFDDLVFLKNHFLDAPHA 159


>Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical
           protein K10G4.4 protein.
          Length = 727

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 365 YWAGPVLRITHRSTLEPEPKSLNIPAAIASRTSFFPSPHS 246
           Y AGPV +++H ST      S+N    +  +  F   PH+
Sbjct: 137 YLAGPVQQVSHLSTASCFFNSINFDDLVFLKNHFLDCPHA 176


>AF022981-11|AAG24207.1|  746|Caenorhabditis elegans Hypothetical
           protein W03F9.4 protein.
          Length = 746

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = -3

Query: 170 YLQIHEDKCSKY-EDRFC----QHLPKPEQPLYDLDSET 69
           Y++ HE   S Y  D  C    +H+PK E+  +D+D ET
Sbjct: 460 YIKYHEQFESPYGPDGHCVGSIEHVPKAERLCWDMDKET 498


>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical protein
            F54E12.2 protein.
          Length = 1091

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/79 (21%), Positives = 40/79 (50%)
 Frame = +1

Query: 247  E*GEGKKLVRDAIAAGIFNDLGSGSNVDLCVIRNTGPAQYLRTYEEANVKGKKQGSYRYA 426
            E G  + ++    A G+  +L  G+++ + V  +  PA   + ++     G+K+  + + 
Sbjct: 982  EKGGARVMLLSLAAGGVGLNLTGGNHL-VMVDLHWNPALEQQAFDRIYRMGQKKDVFIHR 1040

Query: 427  LGTTAVLKQRVIPLEVESI 483
            L T   ++QRV+ L+ + +
Sbjct: 1041 LVTKGTIEQRVVMLQKDKV 1059


>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
            protein F54E12.2 protein.
          Length = 1091

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/79 (21%), Positives = 40/79 (50%)
 Frame = +1

Query: 247  E*GEGKKLVRDAIAAGIFNDLGSGSNVDLCVIRNTGPAQYLRTYEEANVKGKKQGSYRYA 426
            E G  + ++    A G+  +L  G+++ + V  +  PA   + ++     G+K+  + + 
Sbjct: 982  EKGGARVMLLSLAAGGVGLNLTGGNHL-VMVDLHWNPALEQQAFDRIYRMGQKKDVFIHR 1040

Query: 427  LGTTAVLKQRVIPLEVESI 483
            L T   ++QRV+ L+ + +
Sbjct: 1041 LVTKGTIEQRVVMLQKDKV 1059


>U00035-4|AAA50646.2|  482|Caenorhabditis elegans Hypothetical
           protein R01H2.4 protein.
          Length = 482

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = +1

Query: 253 GEGKKLVRDAI--AAGIFNDLGSGSNVDLCVIRNTGPAQYLRTYEEANVKGKKQGSYR 420
           G G   V DA+  A G    +    +  L   RN+    YLRT EE  + GKK    R
Sbjct: 350 GFGDLAVEDAVPSATGDPKKVSHLQHFGLLSFRNSPKKTYLRTPEEKTLLGKKSRQSR 407


>AC098856-4|AAL27248.2|  261|Caenorhabditis elegans Hypothetical
           protein Y37F4.1 protein.
          Length = 261

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 361 QYLRTYEEANVKGKKQGS 414
           QYL+TY+  N KG+K G+
Sbjct: 92  QYLKTYQAINQKGRKLGT 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,283,780
Number of Sequences: 27780
Number of extensions: 280870
Number of successful extensions: 693
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)