Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00932
(741 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 38 0.011
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 36 0.026
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.026
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 36 0.046
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 35 0.060
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 34 0.14
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 34 0.14
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 33 0.18
SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7) 33 0.18
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5) 32 0.42
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 31 0.74
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_22100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 3.0
SB_21877| Best HMM Match : TF_Otx (HMM E-Value=3.1) 29 3.0
SB_4715| Best HMM Match : FlpD (HMM E-Value=1.1) 29 3.0
SB_57705| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 29 4.0
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_19442| Best HMM Match : Beach (HMM E-Value=0) 29 4.0
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 4.0
SB_55256| Best HMM Match : Lamp (HMM E-Value=0.55) 29 4.0
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 29 4.0
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 4.0
SB_2009| Best HMM Match : Drf_FH1 (HMM E-Value=0.18) 29 4.0
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 29 5.2
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_37253| Best HMM Match : Atrophin-1 (HMM E-Value=0.68) 29 5.2
SB_32929| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17) 29 5.2
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 29 5.2
SB_8845| Best HMM Match : Ribosomal_L30_N (HMM E-Value=1.2) 29 5.2
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_45095| Best HMM Match : DUF1168 (HMM E-Value=0.74) 28 6.9
SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_14136| Best HMM Match : Exonuc_X-T (HMM E-Value=6e-25) 28 6.9
SB_58610| Best HMM Match : RVT_1 (HMM E-Value=0.061) 28 6.9
SB_46598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_32671| Best HMM Match : SerH (HMM E-Value=0.4) 28 6.9
SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24) 28 6.9
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 28 6.9
SB_50367| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34) 28 9.1
SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3) 28 9.1
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 28 9.1
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 9.1
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Frame = +2
Query: 257 DYLHNVECGER---TQLEPPIS------TPHC-SRLYGIFPDENKCDVFWNCWNGEASRY 406
D NV+CG T PP + +P C + G + D N C+ F C NG
Sbjct: 487 DNPENVQCGPTRPPTPKVPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYM 546
Query: 407 QCSPGLAYDRESRVCMWADQVPECKNEEVANGFGARPPVRSP 532
C L YD C WAD V +C + +P P
Sbjct: 547 DCPSNLRYDPAKGRCEWADTV-DCGQRPTISPHPPKPTTMPP 587
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Frame = +2
Query: 257 DYLHNVECGERTQLEP-------------PISTPHCS-RLYGIFPDENKCDVFWNCWNGE 394
++ V+CG+R + P P +P C + G + D + C+ F C NG
Sbjct: 562 EWADTVDCGQRPTISPHPPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGY 621
Query: 395 ASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGARP 517
A + C L +D + C W ++V CK+ + +P
Sbjct: 622 AYKRDCPFNLKFDTKKLECEWPNKV-NCKSRPTTVPYVTKP 661
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +2
Query: 275 ECGERTQLE--PPISTPHCS-RLYGIFPDENKCDVFWNCWNG-EASRYQCSPGLAYDRES 442
+C R QL P + + C+ R G + D + C+++ C NG + C GLA++
Sbjct: 298 KCYIRKQLPNLPLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAI 357
Query: 443 RVCMWADQVPECKNEEVANGF 505
+C + VP C +GF
Sbjct: 358 GMCDYPSNVPGCSGSS-GSGF 377
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 553 HAHPEDCRKYYICLEG--VAREYGCPIGTVFKIGDADGTGNCEDPEDVPGCEDYYG 714
+A +C Y C G +A + CP G F + G C+ P +VPGC G
Sbjct: 324 YADSSNCNLYITCSNGFTIANRH-CPTGLAFN----EAIGMCDYPSNVPGCSGSSG 374
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 338 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 469
GI+ ++ C F C G A + C PGL ++ + VC W+ +V
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +3
Query: 27 PGLSSQYEFEVFISVSGRPRRSVAQESFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCG 206
P L+ +F G P+ S F + G Y +C + C G+A KTC
Sbjct: 430 PILTDMKDFAQTFPTEGTPKYSNKDGMFCERNGDGIYAEKENCYGFVLCGGGIAHKKTCP 489
Query: 207 NGLAFD 224
GL F+
Sbjct: 490 PGLIFN 495
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 553 HAHPEDCRKYYICLEGVAREYGCPIGTVF 639
+A E+C + +C G+A + CP G +F
Sbjct: 466 YAEKENCYGFVLCGGGIAHKKTCPPGLIF 494
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 553 HAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDADGTGNCEDPEDVPGCEDYY 711
+ HP+ C+ Y C G+A E CP G + D C+ P + P CE +Y
Sbjct: 94 YPHPDFCKMYIACSNGIAYEMPCPAGLNWN----DEKKYCDWPFNAP-CEGWY 141
Score = 35.1 bits (77), Expect = 0.060
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 308 ISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 472
+ST +R G +P + C ++ C NG A C GL ++ E + C W P
Sbjct: 82 LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAP 136
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 129 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKY 242
G YPH C Y C NG+A C GL ++ + KY
Sbjct: 92 GNYPHPDFCKMYIACSNGIAYEMPCPAGLNWN-DEKKY 128
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 308 ISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQ 466
+S+ C + G++ DE F C+NG +C+ GL ++ + ++C DQ
Sbjct: 2 LSSNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 35.5 bits (78), Expect = 0.046
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 347 PDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 457
PD C +++C G+A R C PG +D C W
Sbjct: 32 PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 132 FYPHHISCDKYWKCDNGVAELKTCGNGLAFD 224
+ P SC Y+ C G A K CG G +D
Sbjct: 30 YLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 35.1 bits (77), Expect = 0.060
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 553 HAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDADGTGNCEDPEDVPGCED 705
+AHPE+C+ Y C + E CP G + D C+ P++ P CE+
Sbjct: 70 YAHPENCKMYITCSNKITYERQCPAGLNWN----DAKKWCDWPKNAP-CEE 115
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +3
Query: 33 LSSQYEFEVFISVSGRPRRSVAQESFK--CPDDF-GFYPHHISCDKYWKCDNGVAELKTC 203
L S + ++ PR+ S C D G Y H CD Y C NG+A C
Sbjct: 307 LKSPATIHIPVTTRNHPRQFTVSTSVSNFCQDKADGNYAHPSKCDMYITCSNGIAHEMPC 366
Query: 204 GNGL 215
GL
Sbjct: 367 PAGL 370
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 553 HAHPEDCRKYYICLEGVAREYGCPIG 630
+AHP C Y C G+A E CP G
Sbjct: 344 YAHPSKCDMYITCSNGIAHEMPCPAG 369
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 338 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 451
G + +KCD++ C NG A C GL ++ ++ C
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKEC 379
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = +3
Query: 264 FTTLSAERGHSLSPQSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESP 443
F L G + PQ P P + AT E P + AP + + P
Sbjct: 432 FPALPVRSGGTPVPQPPPPAADSIPTPPQPQPPATSPEVE--EVPVQLEQAPSVEAGQEP 489
Query: 444 ASACGLIRFRSAKTKK*QTDSAP 512
+ A R ++AKT+ QTDS+P
Sbjct: 490 SPAEFWSRLKNAKTQSKQTDSSP 512
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 294 SLSPQSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFR 473
S++P S + + C + TS+ S AGT++PP + AP P ++ G F
Sbjct: 378 SVAPTSLFGSAKSCAPETKTTTSSN-SLLAGTQQPPTTTTAPVFGQPGKPVASLGTGLFG 436
Query: 474 SAKTKK*QT 500
A+T + T
Sbjct: 437 QAETAETST 445
>SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7)
Length = 123
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 557 LIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKT 679
L P+ SVS V PASTV+ S P RS P+ ++A T
Sbjct: 19 LAPRAFATAPSVSEV-PASTVSSSSPLRRSPGPSGTISAST 58
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 515 PPVRSPTLAR-SAVTLIPKIAVNTTS-VSRVLPASTVAPSEPFSRSETPTA-LVTAKTPK 685
P +PT A + T PK TTS +++ PA+T P++P + TPT TA TP
Sbjct: 64 PTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTP- 122
Query: 686 TFPDART 706
T P +T
Sbjct: 123 TKPTPKT 129
>SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5)
Length = 128
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 554 TLIPKIAVNTT-SVSRVLPASTVAPSEPFSRSETPTALVTAKT 679
TL+ A+ T SVS V PASTV+ S P RS P+ ++A T
Sbjct: 44 TLLAPCALATAPSVSEV-PASTVSSSSPLRRSPGPSGTISAST 85
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 476 CKNEEVANGFGARPPVRS-PTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSET 652
C + ++ P V++ P S T++P A T+S S ST P+E S
Sbjct: 48 CPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSSTS-----STSKPTEDVGTSPQ 102
Query: 653 PTALVTAKTPKTFP 694
P+ TP T+P
Sbjct: 103 PSTENETHTPTTYP 116
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 305 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGL 424
P++ C ++YG+ C W GE +R+Q +PG+
Sbjct: 100 PLAANPCRQVYGVPLGGIGCGTIGRGWRGEFNRWQLTPGI 139
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 511 PAPGEVSNAGSFS-RHAHPEDCRKYYICLEGVAREYGCPIGTVF 639
PA E AG +A P+DC YY C +G + + CP G F
Sbjct: 221 PAEDEKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKF 264
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 102 ESFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDA 227
E F G Y C Y++C G + K C +GL F+A
Sbjct: 225 EKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNA 266
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.1 bits (67), Expect = 0.98
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Frame = +2
Query: 521 VRSPTLARSAVTLIPKIAVNTTSVS---RVLPASTVAPSEPFSRSETPT-----ALVTAK 676
++ TL+ ++P A+ TT+ + + P STVAP + T ALVT K
Sbjct: 4599 IKETTLSPGGQIVLPTSAMETTAEAPDTTMAPVSTVAPETTMAPETTAAPVSTVALVTTK 4658
Query: 677 TPKTFPDARTTM 712
P+T TT+
Sbjct: 4659 APETTKAPETTV 4670
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 599 VLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTTM 712
++P +TVAP E ET A T KTP+T TTM
Sbjct: 4279 IVPETTVAP-ETTKAPETTVASKTTKTPETTFAPETTM 4315
>SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 31.1 bits (67), Expect = 0.98
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 515 PPVRS--PTLARSAVTLIPKIAVNTTSVSRVLPASTVA--PSEPFSRSETPTALVTAKT 679
PP R PTL + +P + N+ S+ LP +A P P S+ PTA+ + T
Sbjct: 397 PPKRRIIPTLVIGSKCPVPDASENSAEKSKALPVKRIAPLPISPGGFSDNPTAICSEST 455
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 533 TLARSAVTLIPKI--AVNTTSVSRVL--PASTVAPSEPFSRSETPTALVTAKTPKTFPDA 700
T A T P+ A TTS S P +T AP E + SET L T PKT
Sbjct: 693 TTAAPETTAAPETTAAPETTSASETTAAPETTTAP-ETTAASETTAVLETTAAPKTTAAP 751
Query: 701 RTTME 715
TT E
Sbjct: 752 ETTAE 756
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +2
Query: 308 ISTPHCS-RLYGIFPDENKCDVFWNCWN-GEASRYQCSPGLAYDRESRVCMWADQVPECK 481
+ T C + G + D C F+ C A ++CSPGL + C W V +C
Sbjct: 778 VDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV-DC- 835
Query: 482 NEEVANGFGARPPVRSP 532
+ + PP +P
Sbjct: 836 DRKTPTPPSPTPPTTTP 852
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 362 CDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFG 508
C F +C N AS C GL Y+ +++ C W V +C + G G
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DCPMGNLDCGVG 138
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 538 GSFSRHAHPEDCRKYYICLEGVAREYGCPIGT 633
G + + C K + C EG+ E CP+GT
Sbjct: 868 GGLTNVSEATSCSKAHYCPEGIEAEVPCPVGT 899
>SB_22100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 557 LIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKT 679
L P+ SVS V PASTV S P S P+ ++A T
Sbjct: 467 LAPRAFATAPSVSEV-PASTVPSSSPLRCSPGPSGTISAST 506
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 571 CRKYYICLEGVAREYGCPIGTVFKIGDADGTGNC 672
C + + C G RE CP GT + A G+C
Sbjct: 31 CVRGHYCPAGTTREIPCPSGTYYPDEGAKAVGDC 64
>SB_21877| Best HMM Match : TF_Otx (HMM E-Value=3.1)
Length = 154
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 557 LIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKT 679
L P+ SVS V PASTV S P S P+ ++A T
Sbjct: 50 LAPRAFATAPSVSEV-PASTVPSSSPLRCSPGPSGTISAST 89
>SB_4715| Best HMM Match : FlpD (HMM E-Value=1.1)
Length = 705
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 557 LIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKT 679
L P+ SVS V PASTV S P S P+ ++A T
Sbjct: 101 LAPRAFATAPSVSEV-PASTVPSSSPLRCSPGPSGTISAST 140
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 557 LIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKT 679
L P+ SVS V PASTV S P S P+ ++A T
Sbjct: 555 LAPRAFATAPSVSEV-PASTVPSSSPLRCSPGPSGTISAST 594
>SB_57705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 248 RERDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKC 364
R+ Y+ E E T PPI +C+++ G F D+ C
Sbjct: 536 RKEKYIQQTENREITNGNPPIKKEYCTKMSG-FCDQESC 573
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = +3
Query: 309 SPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLP----TTESPASACGLIRFRS 476
+P + T+ + M + T + +PP + +AP P T S LI +
Sbjct: 637 TPGSSTTTSTSPAFMARAGTMPDSISVRRPPGMGSAPATPTGLGTISSIVKHMHLIDLET 696
Query: 477 AKTKK*QTDSAPGPR*GLQRWLV 545
AK+ + T P P R++V
Sbjct: 697 AKSLEELTSPFPSPSRNRDRYMV 719
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +3
Query: 90 SVAQESFKCPDDFGFYPHHISCDKYWKCDNGVAELKTC 203
++ + CP GF+P S +Y C E+ +C
Sbjct: 2171 AILSSQYDCPTSDGFFPDPASNGRYIHCSGNSPEIMSC 2208
>SB_19442| Best HMM Match : Beach (HMM E-Value=0)
Length = 796
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 92 TTPRAAANTNKHLEFILRTKSWHES 18
T P A N N+H++F+ R SW E+
Sbjct: 37 TKPIGALNPNRHVQFLERYASWDEN 61
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 527 SPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTP-KTFPDAR 703
+PT T P NTT P +T P++P + TP A T TP T P A
Sbjct: 49 TPTTTTPPATTTPTKPTNTT------PPATTTPTKP--TTTTPPATTTPTTPTTTTPPAT 100
Query: 704 TT 709
TT
Sbjct: 101 TT 102
>SB_55256| Best HMM Match : Lamp (HMM E-Value=0.55)
Length = 284
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 518 PVRSPTLARSAVTLIPK-IAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFP 694
P + L + VT++P I+++++ V AS+V PS TP A T K P T P
Sbjct: 37 PPTTAALLTTPVTIVPSTISMHSSPSISVSVASSVMPSSTSVAPTTPPA-TTTKAPTTPP 95
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 589 CLEGVAREYGCPIGTVFKIGDADGTGNCEDPEDVPGCE 702
C G A GCP GT + + G+C D CE
Sbjct: 1169 CPLGTAEPIGCPNGTFSNVSQLESAGDCTLCSDGMYCE 1206
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 551 VTLIPK--IAVNTTSV--SRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTTM 712
+T++PK IA TT + + P +T AP E +ET A T P+T A TTM
Sbjct: 1199 ITMVPKTTIARETTVAPETTMAPETTAAP-ETTMAAETTLAPETTAAPETTMAAETTM 1255
>SB_2009| Best HMM Match : Drf_FH1 (HMM E-Value=0.18)
Length = 323
Score = 29.1 bits (62), Expect = 4.0
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +3
Query: 291 HSLSPQSPLPTVRDCTASSLMKTSATFS--GTAGTEKPPAISAAPDLPTTESPASACGLI 464
HSLS LP R T SS SAT S G + T P ISA LP + S G+
Sbjct: 73 HSLSATHSLP-YRSATHSS-PGISATHSLPGISATHSLPGISATKSLPGISATHSLPGIS 130
Query: 465 RFRSAKTKK*QTDSAPG 515
S+ T S+PG
Sbjct: 131 ATHSSPGIS-ATHSSPG 146
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 548 AVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
A T P A T+ PA+T P+ + + PT A TP T A TT
Sbjct: 117 AATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAATT 170
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 515 PPVRSPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTP 682
P +P A T P A T+ PA+T P+ + + PT A TP
Sbjct: 116 PAATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAATTP 171
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 596 RVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
R PA+T P+ + + PTA A TP T A TT
Sbjct: 113 RKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATT 150
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 548 AVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
A T P A T+ PA+T P+ + + PT A TP T A TT
Sbjct: 184 AATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPASTT 237
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 596 RVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
R PA+T P+ + + PTA A TP T A TT
Sbjct: 180 RKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATT 217
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 548 AVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
A T P A T+ PA+T P+ + + PT A TP T A TT
Sbjct: 7 AATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAATT 60
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 515 PPVRSPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTP 682
P +P A T P A T+ PA+T P+ + + PT A TP
Sbjct: 6 PAATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAATTP 61
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 596 RVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
R PA+T P+ + + PTA A TP T A TT
Sbjct: 3 RKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATT 40
>SB_37253| Best HMM Match : Atrophin-1 (HMM E-Value=0.68)
Length = 1113
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 542 RSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTAL-VTAKTPKT 688
R+A T IP A +S+S AST AP+ P + T TA + A TP T
Sbjct: 319 RTAATTIPASAT-VSSISTTASAST-APTNPSFATTTVTATSICASTPVT 366
>SB_32929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 557 LIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPT 658
L P+ SVS V PASTV+ S P RS P+
Sbjct: 50 LAPRAFATAPSVSEV-PASTVSSSSPLRRSPGPS 82
>SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17)
Length = 1470
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 554 TLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTTME 715
+L+P++ +V PA+ + +P S T + T + P+T ++TT E
Sbjct: 819 SLVPQLGTTIATVGLTTPAAKPSSVKPTSNPATVLSDGTTENPETTEASKTTTE 872
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 548 AVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
A T P A T+ PA+T P+ + + PT A TP T A TT
Sbjct: 70 AATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPASTT 123
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 596 RVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
R PA+T P+ + + PTA A TP T A TT
Sbjct: 66 RKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATT 103
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 560 IPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTTM 712
+ + ++ +T+ S L AST A + + ++ + K P PDAR TM
Sbjct: 1093 VNEFSIISTTRSFTLSASTSAERDEWLEQDSEDTKLGEKAPVWIPDARVTM 1143
>SB_8845| Best HMM Match : Ribosomal_L30_N (HMM E-Value=1.2)
Length = 490
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 581 TTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
TT S V+PAS P ETPT + + P PDA T
Sbjct: 150 TTPTSPVIPASGPPTRTPIPLKETPTPGLES-APAAMPDATDT 191
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 614 TVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
T+ +EP SR +PTA ++ P PDA T
Sbjct: 156 TLEVAEPLSREGSPTAEESSAPPTDIPDATLT 187
>SB_45095| Best HMM Match : DUF1168 (HMM E-Value=0.74)
Length = 604
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 195 KTCGNGLAFDATDSKYLTENATTFTTLSAERGHSLSPQSPLPTV 326
K GN F A + T N + +T E G ++ P+SP P++
Sbjct: 496 KAAGNPTNFYALTRQMKTINYSLASTKCMEEGWTVKPRSPTPSI 539
>SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3296
Score = 28.3 bits (60), Expect = 6.9
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +3
Query: 165 WKCDNGVAELKTCGNGLAFDAT-DSKYLTENATTFTTLSAERGHSLSPQSPLPTVRD-CT 338
WK + KT + D+T SK +T TT + + + S + + +
Sbjct: 2767 WKIEQRERHAKTTTSASTVDSTGSSKAVTTTVAATTTRTIQAAPASSDNTAANKAQSTSS 2826
Query: 339 ASSLMKTSATFSGTAGTEK--PPAISAAPDL 425
A+S +TS++ S TAG + P AI A +
Sbjct: 2827 ATSSEQTSSSGSNTAGASQSDPGAIRATAQM 2857
>SB_14136| Best HMM Match : Exonuc_X-T (HMM E-Value=6e-25)
Length = 1597
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 536 LARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
L RS T IP + + TT +S +PAS + P E PT + + P PD T
Sbjct: 598 LVRSLET-IPALTL-TTPISPAIPASGPPITTPIPLKEAPTPALES-APAAMPDTTDT 652
>SB_58610| Best HMM Match : RVT_1 (HMM E-Value=0.061)
Length = 1445
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 581 TTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
TT +S +PAS P ETPT + + P PDA T
Sbjct: 469 TTPISPAIPASGRPIRTPIPLKETPTPALES-APAAMPDATDT 510
>SB_46598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1910
Score = 28.3 bits (60), Expect = 6.9
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Frame = +2
Query: 410 CSPGLAYDRESRVCMWADQVPECKNEEVANGFG----ARPPVRSPTLARSAVTLIPKIAV 577
CS ++ + S +C P C+ E ++ + + S LA V +
Sbjct: 68 CSRSISRNSSSEIC------PSCRALETSSLIEFFLLSAKTIVSSCLATLLVRPLETTPA 121
Query: 578 NTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTTMENWI*SD 733
TT S PAS P ETPT + + P PDA T W+ S+
Sbjct: 122 PTTPTSLATPASGPPIRTPIPLKETPTPALES-APAAMPDATDTA--WVSSN 170
>SB_32671| Best HMM Match : SerH (HMM E-Value=0.4)
Length = 406
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 258 TTFTTLSAERGHSLSPQSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP--DLPT 431
+T + +S SL S PT +A+SLM +T S A + P A+SA LP+
Sbjct: 165 STTSLMSLPSTPSLEASSNTPTA--LSATSLMSLPSTSSLEASSNTPTALSATSLMSLPS 222
Query: 432 TES 440
T S
Sbjct: 223 TSS 225
Score = 28.3 bits (60), Expect = 6.9
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 246 TENATTFTTL-SAERGHSLSPQSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPD 422
T A + T+L S SL S PT +A+SLM +T S A + P A+S
Sbjct: 184 TPTALSATSLMSLPSTSSLEASSNTPTA--LSATSLMSLPSTSSLKASSNSPSALSTTSL 241
Query: 423 LPTTESPASA 452
L + P+SA
Sbjct: 242 LSFSIQPSSA 251
>SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24)
Length = 346
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 596 RVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
R PA+T P+ + + PTA A TP T A TT
Sbjct: 288 RKTPAATTPPTGSPAATTPPTAAPAATTPPTVAPAATT 325
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 ATTFTTLSAERGH-SLSPQSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPT 431
AT LS H ++ +S R SLM A+ TA + P +AAP P
Sbjct: 156 ATMAHRLSTSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPV 213
Query: 432 TESPASA 452
T + A A
Sbjct: 214 TPTAAPA 220
>SB_50367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1498
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +2
Query: 449 CMWADQVPECKNEEVANGFGARPPVRSPTLARSAVTLIPKIAVNTTSVSRVLP----AST 616
C + DQ PE + NG+G + R L+P + V +T ++ + P AS
Sbjct: 1138 CSFLDQRPEYEFHSSMNGYGDEDSFVPSVMDRYRQLLLPALQVISTILASLGPQHREASM 1197
Query: 617 VAPSEPFSRSETPTALVTAKTPKTFPDA 700
S ++ T+++ +TP P +
Sbjct: 1198 KVLGVVVSHADVFTSILQDRTPVHTPSS 1225
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 300 SPQSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 449
+P +P + T S+ SA GT GT P+ +AP P+T S S
Sbjct: 487 TPSTPSTSSTPSTPSTPSTPSAP--GTPGTPSTPSTPSAPGTPSTPSTPS 534
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 581 TTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709
T +S PAS P ETPTA + + P PDA T
Sbjct: 652 TKPISPATPASGPPTRTPIPLKETPTAALES-APAAMPDATDT 693
>SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34)
Length = 174
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +2
Query: 404 YQCSPGLAYDRESR-VC---MWADQVPECK 481
Y+C PG D +++ VC W+ VPECK
Sbjct: 144 YRCDPGTDPDGQTQLVCNDGRWSSPVPECK 173
>SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3)
Length = 736
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +2
Query: 527 SPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDART 706
S LA V + TT S PAS P ETPT + + P PDA
Sbjct: 50 SSCLATLLVRPLQTTPAPTTPTSPATPASGPPIRTPIPLKETPTPALES-APAAMPDATD 108
Query: 707 TMEN 718
T N
Sbjct: 109 TAWN 112
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 27.9 bits (59), Expect = 9.1
Identities = 23/61 (37%), Positives = 26/61 (42%)
Frame = +2
Query: 527 SPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDART 706
+P L R T IP A TT S PAS P ETPT + + P PDA
Sbjct: 417 APLLVRPLET-IPAPAP-TTPTSPATPASGPPIRTPIPLKETPTPALES-APAAMPDATD 473
Query: 707 T 709
T
Sbjct: 474 T 474
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +2
Query: 533 TLARSAVTLIPKIAV---NTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDAR 703
T A T++P+ T ++ + T A SE ETP A T P+T
Sbjct: 2224 TTAAPVTTMVPETTAAPATTAALETSIVPETTAASETTVAPETPDAPATTLAPETTAAPE 2283
Query: 704 TTM 712
TT+
Sbjct: 2284 TTV 2286
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,704,684
Number of Sequences: 59808
Number of extensions: 563014
Number of successful extensions: 2329
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2310
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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