Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00932
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 27 0.14
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 24 1.3
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 23 2.3
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 23 2.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.0
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 4.0
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 4.0
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 5.3
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 7.0
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 7.0
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 9.2
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 9.2
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 27.5 bits (58), Expect = 0.14
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 442 GLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQS 329
GL G SGAALIA +PE +V I D +++
Sbjct: 301 GLLCGGSSGAALIAALKIAKDIPEEKRMVIILPDGIRN 338
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 715 LHSSPRIRERLRGLRSYQC 659
LH +P +RE L G +++C
Sbjct: 33 LHDNPSLREGLAGASTFRC 51
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 23.4 bits (48), Expect = 2.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 335 YGIFPDENKCDVFWNC 382
YG FP++ K ++NC
Sbjct: 59 YGEFPEDEKLKCYFNC 74
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 632 PFSRSETPTALVTAKTPKT 688
PF S T +VTA TP T
Sbjct: 4 PFLSSSVSTVIVTALTPST 22
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 326 NSGEWRLGAQAVSSLRTQRCEGSRVLG 246
NSG R G QA S + Q+ G V+G
Sbjct: 1565 NSGNNRSGEQANSQQQQQQQSGEPVIG 1591
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.6 bits (46), Expect = 4.0
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Frame = +3
Query: 141 HHISCDKYWKCDNGV-----AELKTCGNGL-AFDATDSKYLTE 251
H SCD+ W D G ++ C L FD T K L +
Sbjct: 134 HADSCDRLWVLDTGTIGIGNTTIQACPYTLNIFDLTSDKLLRQ 176
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Frame = -3
Query: 451 ADAGLSVVGKSGAALIAGGFSVPAV----PENVA 362
+ AG+ VVG + A+++AG S+ V PE++A
Sbjct: 9 SSAGVGVVGGTIASVVAGAASLTLVKAETPEHLA 42
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -3
Query: 322 VGSGDWGLKLCPLSALNVVKVVAF 251
VGSG+WG + + +N F
Sbjct: 10 VGSGNWGSTIAKIIGINAANFSNF 33
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.8 bits (44), Expect = 7.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 490 SSKRIRRPAPGEVSNAGSFSRHAHPE 567
+S R+R VSN+ S S H H E
Sbjct: 25 NSDRVRGNGNAIVSNSASNSVHGHRE 50
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.8 bits (44), Expect = 7.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 490 SSKRIRRPAPGEVSNAGSFSRHAHPE 567
+S R+R VSN+ S S H H E
Sbjct: 26 NSDRVRGNGNAIVSNSASNSVHGHRE 51
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 9.2
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = +3
Query: 156 DKYWKCDNGVAELKTCGNG 212
+ YW+C++ +++ G G
Sbjct: 63 ENYWQCNDKKTDIEETGRG 81
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 150 SCDKYWKCDNGVAEL 194
+CD+ W D GV ++
Sbjct: 119 ACDRLWGVDTGVDDI 133
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 230 CGVESETVTAGFQFGNTIVALPV 162
CG+ E FQ G+TI+ + +
Sbjct: 655 CGLRFEDPMISFQPGDTIICINI 677
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,632
Number of Sequences: 438
Number of extensions: 4808
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -