BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00932 (741 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 29 2.4 At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 29 2.4 At3g06410.1 68416.m00739 zinc finger (CCCH-type) family protein ... 29 3.2 At2g47850.1 68415.m05972 zinc finger (CCCH-type) family protein ... 29 3.2 At5g18550.1 68418.m02193 zinc finger (CCCH-type) family protein ... 29 4.3 At5g08020.1 68418.m00933 replication protein, putative similar t... 29 4.3 At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 4.3 At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 4.3 At2g28500.1 68415.m03463 LOB domain protein 11 / lateral organ b... 29 4.3 At1g44770.1 68414.m05129 expressed protein 29 4.3 At1g26700.1 68414.m03252 seven transmembrane MLO family protein ... 29 4.3 At3g30841.1 68416.m03967 2,3-biphosphoglycerate-independent phos... 28 5.7 At5g23700.1 68418.m02778 hypothetical protein 28 7.5 At3g13090.1 68416.m01639 ABC transporter, putative similar to MR... 28 7.5 At1g55440.1 68414.m06341 DC1 domain-containing protein contains ... 28 7.5 At1g46696.1 68414.m05216 hypothetical protein slight similarity ... 28 7.5 At1g35180.1 68414.m04362 expressed protein similar to hypothetic... 28 7.5 At1g35170.1 68414.m04361 expressed protein 28 7.5 At1g18280.1 68414.m02282 protease inhibitor/seed storage/lipid t... 28 7.5 At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 28 7.5 At5g14620.1 68418.m01714 cytosine methyltransferase (DRM2) ident... 27 9.9 At5g12860.1 68418.m01476 oxoglutarate/malate translocator, putat... 27 9.9 At5g08530.1 68418.m01013 NADH-ubiquinone oxidoreductase 51 kDa s... 27 9.9 At5g06530.2 68418.m00737 ABC transporter family protein 27 9.9 At5g06530.1 68418.m00736 ABC transporter family protein 27 9.9 At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identic... 27 9.9 At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identic... 27 9.9 At1g77400.1 68414.m09013 expressed protein 27 9.9 At1g32000.1 68414.m03937 hypothetical protein 27 9.9 >At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) Length = 587 Score = 29.5 bits (63), Expect = 2.4 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = +2 Query: 530 PTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 709 PTL AV+ NTTS + + + PSEPF S T + + + D T Sbjct: 305 PTLQGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTIPPYILPSSDALY-DPFTD 363 Query: 710 MEN 718 +EN Sbjct: 364 IEN 366 >At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein low similarity to glucoamylase S1/S2 [Precursor] from Saccharomyces cerevisiae [SP|P08640], proteophosphoglycan from Leishmania major [GI:5420387]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 Length = 256 Score = 29.5 bits (63), Expect = 2.4 Identities = 22/75 (29%), Positives = 31/75 (41%) Frame = +2 Query: 470 PECKNEEVANGFGARPPVRSPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSE 649 P C A PPV SPT + S+ P I ++ +VS P S P S S Sbjct: 119 PNCDVSTPAASTPVSPPVESPTTSPSSAK-SPAITPSSPAVSH-SPPPVRHSSPPVSHSS 176 Query: 650 TPTALVTAKTPKTFP 694 P + + T ++ P Sbjct: 177 PPVSHSSPPTSRSSP 191 >At3g06410.1 68416.m00739 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) Length = 437 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -3 Query: 625 WGNRTRGQHPRDRCSIYGNLRDE 557 +G+R R HPRDR ++ G +R E Sbjct: 46 YGSRCRFNHPRDRGAVIGGVRGE 68 >At2g47850.1 68415.m05972 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) Length = 468 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 625 WGNRTRGQHPRDRCSIYGNLR 563 +GNR R HPRDR S+ +R Sbjct: 62 YGNRCRYNHPRDRASVEATVR 82 >At5g18550.1 68418.m02193 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) Length = 456 Score = 28.7 bits (61), Expect = 4.3 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 625 WGNRTRGQHPRDRCSIYGNLRDE 557 +G+R R HPR+R + G LR E Sbjct: 59 YGSRCRFNHPRNRAPVLGGLRTE 81 >At5g08020.1 68418.m00933 replication protein, putative similar to replication protein A1 [Oryza sativa] GI:2258469; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain Length = 604 Score = 28.7 bits (61), Expect = 4.3 Identities = 13/45 (28%), Positives = 25/45 (55%) Frame = -2 Query: 146 VVRVETEVVGAFEGLLGHTTPRAAANTNKHLEFILRTKSWHESSG 12 V+ +++ VGAF+G+ T R+ N + + KSW+++ G Sbjct: 357 VIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDAEG 401 >At2g43680.2 68415.m05430 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif Length = 669 Score = 28.7 bits (61), Expect = 4.3 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = +2 Query: 497 NGFGARPPVR--SPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVT 670 N + A PP R SP +A T P++A R T++P P R+E P +L + Sbjct: 86 NPYSASPPPRPASPRVASPRPTS-PRVASPRVPSPRAEVPRTLSPKPPSPRAEVPRSL-S 143 Query: 671 AKTPKTFPD 697 K P D Sbjct: 144 PKPPSPRAD 152 >At2g43680.1 68415.m05429 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif Length = 668 Score = 28.7 bits (61), Expect = 4.3 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = +2 Query: 497 NGFGARPPVR--SPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVT 670 N + A PP R SP +A T P++A R T++P P R+E P +L + Sbjct: 85 NPYSASPPPRPASPRVASPRPTS-PRVASPRVPSPRAEVPRTLSPKPPSPRAEVPRSL-S 142 Query: 671 AKTPKTFPD 697 K P D Sbjct: 143 PKPPSPRAD 151 >At2g28500.1 68415.m03463 LOB domain protein 11 / lateral organ boundaries domain protein 11 (LBD11) identical to SP|Q9SK08 LOB domain protein 11 {Arabidopsis thaliana} Length = 229 Score = 28.7 bits (61), Expect = 4.3 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = +3 Query: 336 TASSLMKTSATF------SGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSA 479 TAS++ K + T S T+ PP+ P P SP +AC ++R R A Sbjct: 11 TASAVAKVTETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCA 64 >At1g44770.1 68414.m05129 expressed protein Length = 271 Score = 28.7 bits (61), Expect = 4.3 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -1 Query: 402 REASPFQQFQKTSHLFSSGKMPYSLEQWGVEIGG 301 +E + + K ++ +GKM Y+L WG+ GG Sbjct: 212 QEVTALSKVGKVVDIWHAGKMFYTLSTWGLAFGG 245 >At1g26700.1 68414.m03252 seven transmembrane MLO family protein / MLO-like protein 14 (MLO14) identical to membrane protein Mlo14 [Arabidopsis thaliana] gi|14091598|gb|AAK53807; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley] Length = 554 Score = 28.7 bits (61), Expect = 4.3 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +3 Query: 201 CGNGLAFDATDSKYLTE-NATTFTTLSAERGHSLSPQSPLPTVRDC 335 CGN + + + ++TTF+ L E SLS S LP R+C Sbjct: 509 CGNSSSVETPILRPCASISSTTFSRLQTETTDSLSRSSSLPMRREC 554 >At3g30841.1 68416.m03967 2,3-biphosphoglycerate-independent phosphoglycerate mutase-related / phosphoglyceromutase-related contains weak similarity to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1) (BPG-independent PGAM 1) (aPGAM 1) (aPGAM-Mj1). (Swiss-Prot:Q59007) [Methanococcus jannaschii] Length = 495 Score = 28.3 bits (60), Expect = 5.7 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 2/104 (1%) Frame = -3 Query: 466 LISPHADAGLSVVGKSGAALIAGGFSVPAVPENVALVFIR-EDAVQSRTVGSGDWG-LKL 293 L +P A + S A IA S P P VF+ ED + D+G L + Sbjct: 278 LEAPGATGDYRTLLTSKATAIANALSAPLNP--CPNVFVPGEDGHKPGRSDGYDFGFLHI 335 Query: 292 CPLSALNVVKVVAFSVKYLESVASKARPLPQVFSSATPLSHFQY 161 + K F V+ LE+V R L ++ A +H+QY Sbjct: 336 KAIDDAGHDKATMFKVRGLEAVDKAIRQLAKLLWQAESSTHYQY 379 >At5g23700.1 68418.m02778 hypothetical protein Length = 572 Score = 27.9 bits (59), Expect = 7.5 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 4/91 (4%) Frame = +2 Query: 425 AYDRESRVCMWADQVPECKNEEVANGFGARPPVRSP---TLARSAVTLIPKIAVNTTS-V 592 A R ++V ++ E +++ + F PP P + AR + P I N T V Sbjct: 57 AAQRLAKVMALQNKDNEEDDDDDDHEFKFAPPSSGPINGSFARRNRSHSPAIGRNITEQV 116 Query: 593 SRVLPASTVAPSEPFSRSETPTALVTAKTPK 685 + V +ST PS FSRS TP A PK Sbjct: 117 TSVRSSSTGRPST-FSRSSTPNASPLWMPPK 146 >At3g13090.1 68416.m01639 ABC transporter, putative similar to MRP-like ABC transporter [Arabidopsis thaliana] GI:2316016; contains Pfam profile: PF00005 ABC transporter Length = 1466 Score = 27.9 bits (59), Expect = 7.5 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Frame = +3 Query: 294 SLSPQSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISA-APDLPTTESPASACG 458 S SP+PT+RD + GT G+ K +S+ ++P CG Sbjct: 609 SWDDSSPIPTLRDMNFKVSQGMNVAICGTVGSGKSSLLSSILGEVPKISGNLKVCG 664 >At1g55440.1 68414.m06341 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 653 Score = 27.9 bits (59), Expect = 7.5 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 649 DADGTGNCEDPEDVPGCEDYYGELDLKRSA 738 D DG G+ + D+ G +D YG +D+ A Sbjct: 111 DGDGDGDGDGSVDIDGDDDAYGSVDIDGDA 140 >At1g46696.1 68414.m05216 hypothetical protein slight similarity to maebl (GI:20087019)[Plasmodium falciparum]. Length = 616 Score = 27.9 bits (59), Expect = 7.5 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 596 RVLPASTVAPSEPFSRSETPTALVTAKTPKT 688 R L + PS+ SR ETPT++ K P+T Sbjct: 211 RSLEKTKYQPSDSGSRPETPTSVSAGKKPET 241 >At1g35180.1 68414.m04362 expressed protein similar to hypothetical protein GB:AAF69173 GI:7767676 from [Arabidopsis thaliana] Length = 231 Score = 27.9 bits (59), Expect = 7.5 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 3/38 (7%) Frame = -3 Query: 340 AVQSRTVGSGDWGLKLCPL---SALNVVKVVAFSVKYL 236 AV T+ DW +CP+ S+L ++ +AFS+ Y+ Sbjct: 50 AVTLATLSIQDWSCPVCPIASTSSLRQMETLAFSLSYM 87 >At1g35170.1 68414.m04361 expressed protein Length = 221 Score = 27.9 bits (59), Expect = 7.5 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 3/38 (7%) Frame = -3 Query: 340 AVQSRTVGSGDWGLKLCPL---SALNVVKVVAFSVKYL 236 AV T+ DW +CP+ S+L ++ +AFS+ Y+ Sbjct: 50 AVTLATLSIQDWSCPVCPIASTSSLRQMETLAFSLSYM 87 >At1g18280.1 68414.m02282 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid transfer protein GI:2627141 from (Picea abies); contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family Length = 180 Score = 27.9 bits (59), Expect = 7.5 Identities = 21/83 (25%), Positives = 35/83 (42%) Frame = +3 Query: 264 FTTLSAERGHSLSPQSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESP 443 F + + +L+ ++ L + C A + + T +GT + PPA P +T S Sbjct: 81 FNNVDMLKSLNLTKENALDLPKACGAKADVSLCKTSAGTNSSSTPPATPKTPPASST-ST 139 Query: 444 ASACGLIRFRSAKTKK*QTDSAP 512 + G + T K T SAP Sbjct: 140 GTGSGSTGNAAPSTAK-PTSSAP 161 >At1g11660.1 68414.m01339 heat shock protein, putative strong similarity to gb|Z70314 heat-shock protein from Arabidopsis thaliana and is a member of the PF|00012 Hsp70 protein family Length = 773 Score = 27.9 bits (59), Expect = 7.5 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -3 Query: 451 ADAGLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQSRTVGSGDWGLKLCPL 284 AD+GLS+ L+ G +PA+ + ++ +F RE RTV + + + C L Sbjct: 324 ADSGLSLDQIHSVELVGSGSRIPAISKMLSSLFKRE---LGRTVNASECVARGCAL 376 >At5g14620.1 68418.m01714 cytosine methyltransferase (DRM2) identical to cytosine methyltransferase GI:7658293 from [Arabidopsis thaliana] Length = 626 Score = 27.5 bits (58), Expect = 9.9 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +2 Query: 248 RERDYLHNVECGERTQLEPP 307 R+R Y+HN+ R Q++PP Sbjct: 347 RKRGYIHNLPINNRFQIQPP 366 >At5g12860.1 68418.m01476 oxoglutarate/malate translocator, putative similar to 2-oxoglutarate/malate translocator precursor, spinach, SWISSPROT:Q41364 Length = 557 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +3 Query: 306 QSPLPTVRDCTASSLMKTSATFSGTAGTEKPPAISA 413 +SPLP +S+L+K S+T + + + PP + A Sbjct: 48 KSPLPVSLRRRSSTLVKASSTVASASSSPTPPLVPA 83 >At5g08530.1 68418.m01013 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial, putative similar to NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) from {Homo sapiens} SP|P49821, {Bos taurus} SP|P25708, {Aspergillus niger} SP|Q92406; contains Pfam profile PF01512: Respiratory-chain NADH dehydrogenase 51 Kd subunit Length = 486 Score = 27.5 bits (58), Expect = 9.9 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -3 Query: 475 LRNLISPHADAGLSVVGKSGAALIAGGFSVPAVPENVAL-VFIREDAVQSRTVGSG 311 L+ LI H G+ + A+I GG SVP +P+N+ V + DA+++ G G Sbjct: 319 LKELIERHC-GGVRGGWDNLLAIIPGGSSVPLIPKNICEDVLMDFDALKAVQSGLG 373 >At5g06530.2 68418.m00737 ABC transporter family protein Length = 691 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 466 GSGVQKRRSSKRIRRPAPGEVSNAGSFSR 552 G G R+SS+R+ +PG S AG+ R Sbjct: 50 GGGTLSRKSSRRLMGMSPGRSSGAGTHIR 78 >At5g06530.1 68418.m00736 ABC transporter family protein Length = 751 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 466 GSGVQKRRSSKRIRRPAPGEVSNAGSFSR 552 G G R+SS+R+ +PG S AG+ R Sbjct: 50 GGGTLSRKSSRRLMGMSPGRSSGAGTHIR 78 >At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identical to gi_11935086_gb_AAG41963 Length = 162 Score = 27.5 bits (58), Expect = 9.9 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%) Frame = +3 Query: 294 SLSPQSPLPTVRDCTASSLMKT--SATFSGT-AGTEK--PPAISAAPDLPTTESPASACG 458 ++SP +P P + A + ++ A S T A T + PPA S D P+ A + Sbjct: 45 AISPAAPTPESTEAPAKTPVEAPVEAPPSPTPASTPQISPPAPSPEADTPSAPEIAPSAD 104 Query: 459 L----IRFRSAKTKK*QTDSAPGP 518 + + KTKK +T APGP Sbjct: 105 VPAPALTKHKKKTKKHKTAPAPGP 128 >At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identical to gi_11935086_gb_AAG41963 Length = 185 Score = 27.5 bits (58), Expect = 9.9 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%) Frame = +3 Query: 294 SLSPQSPLPTVRDCTASSLMKT--SATFSGT-AGTEK--PPAISAAPDLPTTESPASACG 458 ++SP +P P + A + ++ A S T A T + PPA S D P+ A + Sbjct: 45 AISPAAPTPESTEAPAKTPVEAPVEAPPSPTPASTPQISPPAPSPEADTPSAPEIAPSAD 104 Query: 459 L----IRFRSAKTKK*QTDSAPGP 518 + + KTKK +T APGP Sbjct: 105 VPAPALTKHKKKTKKHKTAPAPGP 128 >At1g77400.1 68414.m09013 expressed protein Length = 232 Score = 27.5 bits (58), Expect = 9.9 Identities = 16/57 (28%), Positives = 28/57 (49%) Frame = +2 Query: 518 PVRSPTLARSAVTLIPKIAVNTTSVSRVLPASTVAPSEPFSRSETPTALVTAKTPKT 688 P+R L+ S L P ++ ++S + ++P P S S TP+ L +TP + Sbjct: 48 PLRFKPLSHSQPLLPPALSPPSSSFISNSKSRPLSPLTPHSFSTTPSKLKPPRTPSS 104 >At1g32000.1 68414.m03937 hypothetical protein Length = 181 Score = 27.5 bits (58), Expect = 9.9 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Frame = +1 Query: 517 PGEVSNAGSFSRHAHPEDC---RKYYICLEGVAREY 615 PG V RH HPE+ R ++ LEG R Y Sbjct: 84 PGSVKYPADLLRHLHPEEAARFRYWFRTLEGQLRAY 119 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,027,665 Number of Sequences: 28952 Number of extensions: 382857 Number of successful extensions: 1355 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 1292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1352 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1633819784 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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