Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00931
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   1.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   2.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   2.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   8.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   8.1  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 4   VLSHLI*HDFKIVVCSFSPFGIFC 75
           +L+ +I     I++  +SPFGI C
Sbjct: 270 ILNEIIMKLVGIIIMWYSPFGIMC 293


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 48  TNYYLKVMSNQMGK 7
           T Y+L+ MSN +GK
Sbjct: 270 TRYFLERMSNDLGK 283


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 48  TNYYLKVMSNQMGK 7
           T Y+L+ MSN +GK
Sbjct: 270 TRYFLERMSNDLGK 283


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 191 GDKIEMKRSSQFLKMLS*SE*NNIK 265
           G+KI +  S  F+K  S +E +N K
Sbjct: 553 GNKISLATSKSFIKANSQTEVSNSK 577


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 42  YYLKVMSNQMGK 7
           YYL+ +SN MG+
Sbjct: 269 YYLERLSNDMGE 280


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 42  YYLKVMSNQMGK 7
           YYL+ +SN MG+
Sbjct: 269 YYLERLSNDMGE 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,169
Number of Sequences: 438
Number of extensions: 1902
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)