Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00930
(665 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 26 1.2
EF519472-1|ABP73553.1| 165|Anopheles gambiae CTLMA2 protein. 25 2.1
EF519475-1|ABP73559.1| 165|Anopheles gambiae CTLMA2 protein. 25 2.8
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 25 2.8
AY748830-1|AAV28178.1| 95|Anopheles gambiae cytochrome P450 pr... 24 3.7
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 24 5.0
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 24 5.0
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 24 5.0
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 6.5
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 23 8.7
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 8.7
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 25.8 bits (54), Expect = 1.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 433 SWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 317
++V+AN L V FLL K L + W+ + S+DE
Sbjct: 927 AFVMANALFVLVIFLLQLKKQELHIEWWFNVKNKISFDE 965
>EF519472-1|ABP73553.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 25.0 bits (52), Expect = 2.1
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 605 SPCVFPCKTYTKSVVLVP 658
+PC+ PCK + + V +P
Sbjct: 23 NPCLCPCKPFEEKVYFIP 40
>EF519475-1|ABP73559.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 24.6 bits (51), Expect = 2.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 566 LSMPSCHLPAPLTSPCVFPCKTYTKSVVLVP 658
LS P P +PC+ PCK + + +P
Sbjct: 10 LSGPHTVDDIPQQNPCLCPCKPFEEKEYFIP 40
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 24.6 bits (51), Expect = 2.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 379 GNQEGSILIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQN 498
G Q + I + WLQ + RA RR+H +F+ N
Sbjct: 982 GRQFSNEGISGQSWLQLQQQKLRARREQQRREHSNSFSYN 1021
>AY748830-1|AAV28178.1| 95|Anopheles gambiae cytochrome P450
protein.
Length = 95
Score = 24.2 bits (50), Expect = 3.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 413 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFRDGRWSVK-KAKLTENASL 562
K + V F+PI+G H D P+ F R+SV+ + K+ N L
Sbjct: 35 KFTIDKGTVVFIPIAGLHHDPQYYPNPSK--FDPERFSVENRDKINPNTYL 83
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.8 bits (49), Expect = 5.0
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +2
Query: 539 KLTENASLKLSMPSCHLPAP--LTSPCVFPCKTYTKSVVLVPC 661
+L + L +PSC LP P + P P KS C
Sbjct: 90 ELVTRSLSNLELPSCRLPCPNLIPRPAEVPTTPEHKSAASSSC 132
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.8 bits (49), Expect = 5.0
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 377 EEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFRDG-RWSVKK 535
EE+K+E+ GY P +A G+N L + + DG + VKK
Sbjct: 906 EEVKEELGRERNNAGYTPLQLADAKSHTGQGNNKLIVRELLRHYPDGLQKEVKK 959
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 23.8 bits (49), Expect = 5.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 583 PPARPTDKPLRLP 621
P +RPT KP RLP
Sbjct: 289 PRSRPTSKPKRLP 301
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 353 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 445
PP+S +KK+ Y+++ N +A F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 23.0 bits (47), Expect = 8.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 108 WKFETSKYYVTIIDAPG 158
W +E K+ T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.0 bits (47), Expect = 8.7
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 333 TKWIPLNHHTVSPDLRKSRRK----YPHTSRRLATTQLLSLS 446
T ++ L+HH + PD+ K+ + + T AT +L+++S
Sbjct: 822 TLFMALDHHDMDPDMEKALKSGNYFFTATFAIEATMKLIAMS 863
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,430
Number of Sequences: 2352
Number of extensions: 18489
Number of successful extensions: 73
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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