Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00930
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 176 1e-44
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 175 2e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 175 2e-44
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 158 3e-39
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 94 7e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 4e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 4e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 5e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 5e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 5e-11
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 51 6e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.14
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.24
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.24
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.97
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.3
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.7
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.7
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.2
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.2
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.2
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.2
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.0
U80022-4|AAC25887.2| 469|Caenorhabditis elegans Expulsion defec... 29 3.9
U80022-3|AAV28354.1| 490|Caenorhabditis elegans Expulsion defec... 29 3.9
U80022-2|AAV28355.1| 510|Caenorhabditis elegans Expulsion defec... 29 3.9
U80022-1|AAV28356.1| 501|Caenorhabditis elegans Expulsion defec... 29 3.9
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 176 bits (428), Expect = 1e-44
Identities = 100/169 (59%), Positives = 108/169 (63%)
Frame = +3
Query: 3 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 182
EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNM
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNM 102
Query: 183 ITGTSQADCAVLIVAAGTGEFEAGSLRTVKXXXXXXXXXXXXXXXXXXE*TKWIPLNHHT 362
ITGTSQADCAVL+VA GTGEFEAG + + + + L T
Sbjct: 103 ITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV-------KQLVSLRSPT 155
Query: 363 VSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGS 509
SPD +SRR T Q L D TETTC C GS
Sbjct: 156 RSPD----------SSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGS 194
Score = 55.2 bits (127), Expect = 4e-08
Identities = 48/134 (35%), Positives = 61/134 (45%)
Frame = +2
Query: 257 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA 436
SKNGQTREHALLA TLGVKQL V+ T P S R + I++ + + +P +
Sbjct: 128 SKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR-----LFHLSQSPDS 179
Query: 437 VAFVPISGWHGDNMLEPSTKMPWFRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCV 616
L RDG + +K L E S +L PS H A LT V
Sbjct: 180 TE---------TTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLTDHSV 230
Query: 617 FPCKTYTKSVVLVP 658
F + T+S L P
Sbjct: 231 FHSRMCTRSEELEP 244
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 175 bits (427), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 182
EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNM
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNM 102
Query: 183 ITGTSQADCAVLIVAAGTGEFEAG 254
ITGTSQADCAVL+VA GTGEFEAG
Sbjct: 103 ITGTSQADCAVLVVACGTGEFEAG 126
Score = 145 bits (352), Expect = 2e-35
Identities = 76/124 (61%), Positives = 89/124 (71%)
Frame = +2
Query: 257 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA 436
SKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP A
Sbjct: 128 SKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKA 187
Query: 437 VAFVPISGWHGDNMLEPSTKMPWFRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCV 616
V FVPISG++GDNMLE S+ MPWF+ W+V++ + NAS K + + P P
Sbjct: 188 VPFVPISGFNGDNMLEVSSNMPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQRPTD 243
Query: 617 FPCK 628
P +
Sbjct: 244 RPLR 247
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +1
Query: 508 QGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVP 663
+GW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVP
Sbjct: 212 KGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVP 263
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 175 bits (427), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 182
EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNM
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNM 102
Query: 183 ITGTSQADCAVLIVAAGTGEFEAG 254
ITGTSQADCAVL+VA GTGEFEAG
Sbjct: 103 ITGTSQADCAVLVVACGTGEFEAG 126
Score = 145 bits (352), Expect = 2e-35
Identities = 76/124 (61%), Positives = 89/124 (71%)
Frame = +2
Query: 257 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA 436
SKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP A
Sbjct: 128 SKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKA 187
Query: 437 VAFVPISGWHGDNMLEPSTKMPWFRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCV 616
V FVPISG++GDNMLE S+ MPWF+ W+V++ + NAS K + + P P
Sbjct: 188 VPFVPISGFNGDNMLEVSSNMPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQRPTD 243
Query: 617 FPCK 628
P +
Sbjct: 244 RPLR 247
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +1
Query: 508 QGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVP 663
+GW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVP
Sbjct: 212 KGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVP 263
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 158 bits (384), Expect = 3e-39
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +3
Query: 3 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 182
EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNM
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNM 102
Query: 183 ITGTSQADCAVLIVA 227
ITGTSQADCAVL+VA
Sbjct: 103 ITGTSQADCAVLVVA 117
Score = 108 bits (260), Expect = 3e-24
Identities = 56/104 (53%), Positives = 70/104 (67%)
Frame = +2
Query: 317 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 496
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 497 MPWFRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCK 628
MPWF+ W+V++ + NAS K + + P P P +
Sbjct: 174 MPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQRPTDRPLR 213
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +1
Query: 508 QGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVP 663
+GW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVP
Sbjct: 178 KGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVP 229
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 114 bits (275), Expect = 5e-26
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = +3
Query: 9 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 188
EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMIT
Sbjct: 208 EAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMIT 267
Query: 189 GTSQADCAVLIVAAGTGEFEAG 254
GTSQAD A+L+V A TGEFE G
Sbjct: 268 GTSQADAAILVVNATTGEFETG 289
Score = 71.7 bits (168), Expect = 4e-13
Identities = 38/89 (42%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +2
Query: 254 FSKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNP 430
F GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 290 FENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSK 347
Query: 431 AAVAFVPISGWHGDNMLEPSTKMPWFRDG 517
FVP+SG+ G+N+++ ++ W+ DG
Sbjct: 348 P--KFVPVSGFTGENLIK-RMELDWY-DG 372
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 544 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKI 642
DG CL+E +D+ + P P+D PLR+ + DV K+
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKV 403
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 114 bits (275), Expect = 5e-26
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = +3
Query: 9 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 188
EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMIT
Sbjct: 226 EAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMIT 285
Query: 189 GTSQADCAVLIVAAGTGEFEAG 254
GTSQAD A+L+V A TGEFE G
Sbjct: 286 GTSQADAAILVVNATTGEFETG 307
Score = 71.7 bits (168), Expect = 4e-13
Identities = 38/89 (42%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +2
Query: 254 FSKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNP 430
F GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 308 FENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSK 365
Query: 431 AAVAFVPISGWHGDNMLEPSTKMPWFRDG 517
FVP+SG+ G+N+++ ++ W+ DG
Sbjct: 366 P--KFVPVSGFTGENLIK-RMELDWY-DG 390
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 544 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKI 642
DG CL+E +D+ + P P+D PLR+ + DV K+
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKV 421
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 94.3 bits (224), Expect = 7e-20
Identities = 41/84 (48%), Positives = 59/84 (70%)
Frame = +3
Query: 3 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 182
E+EA+E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH+ F+ NM
Sbjct: 145 EREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNM 204
Query: 183 ITGTSQADCAVLIVAAGTGEFEAG 254
I G +QAD AVL+++A GEFE G
Sbjct: 205 IVGANQADLAVLVISARRGEFETG 228
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 254 FSKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPA 433
F + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP
Sbjct: 229 FDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPK 288
Query: 434 A-VAFVPISGWHG 469
+ +VP SG G
Sbjct: 289 TDITYVPCSGLTG 301
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +3
Query: 54 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 233
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 234 TGEFE 248
G E
Sbjct: 143 DGVME 147
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 269 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 448
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +3
Query: 54 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 233
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 234 TGEFE 248
G E
Sbjct: 143 DGVME 147
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 269 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 448
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 54 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 233
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 234 TG 239
G
Sbjct: 147 DG 148
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 269 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 424
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 54 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 233
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 234 TG 239
G
Sbjct: 148 DG 149
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 269 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 424
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 54 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 233
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 234 TG 239
G
Sbjct: 148 DG 149
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 269 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 424
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +3
Query: 3 EKEAQEMGKGSFKYAWVLDKLKAER 77
EKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKVTK 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 51 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 230
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 231 GTG 239
G
Sbjct: 136 NQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 51 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 230
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 231 GTG 239
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 54 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 233
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 234 TG 239
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 24 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 200
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 201 ADCAVLIVAA--GTGEFEAGSLRTVK 272
AD VL+VAA G E A S++ K
Sbjct: 228 ADIVVLVVAADDGVKEQTAQSIKFAK 253
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 54 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 224
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 54 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 224
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 57 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 221
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 222 VAAGTG 239
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 57 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 221
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 222 VAAGTG 239
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.97
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 132 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 227
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 90 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 239
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 90 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 239
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 141 IIDAPGHRDFIKNMITGTSQADCAVLIV 224
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 399 PHTSRRLATTQLLSLSCPFLD 461
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 399 PHTSRRLATTQLLSLSCPFLD 461
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 399 PHTSRRLATTQLLSLSCPFLD 461
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 399 PHTSRRLATTQLLSLSCPFLD 461
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 269 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVA 442
QT EH LLA ++I+ +NK D E + + E K+V +K +G N V
Sbjct: 112 QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVE 167
Query: 443 FVPISGWHGDNMLE 484
G+ + ML+
Sbjct: 168 MSLADGYFKEEMLQ 181
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 135 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 239
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>U80022-4|AAC25887.2| 469|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform a protein.
Length = 469
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 400 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGWQVERKEGKAD 546
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 108 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 156
>U80022-3|AAV28354.1| 490|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform b protein.
Length = 490
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 400 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGWQVERKEGKAD 546
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 129 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 177
>U80022-2|AAV28355.1| 510|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform c protein.
Length = 510
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 400 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGWQVERKEGKAD 546
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 149 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 197
>U80022-1|AAV28356.1| 501|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform d protein.
Length = 501
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 400 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGWQVERKEGKAD 546
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 140 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 188
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 135 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 230
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,061,997
Number of Sequences: 27780
Number of extensions: 380573
Number of successful extensions: 1248
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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