Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00930
(665 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 179 2e-47
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 177 6e-47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 177 6e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 175 2e-46
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.0
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.0
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 179 bits (436), Expect = 2e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 182
EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 102
Query: 183 ITGTSQADCAVLIVAAGTGEFEAG 254
ITGTSQADCAVLIVAAGTGEFEAG
Sbjct: 103 ITGTSQADCAVLIVAAGTGEFEAG 126
Score = 177 bits (432), Expect = 6e-47
Identities = 83/93 (89%), Positives = 88/93 (94%)
Frame = +2
Query: 257 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA 436
SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAA
Sbjct: 128 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAA 187
Query: 437 VAFVPISGWHGDNMLEPSTKMPWFRDGRWSVKK 535
VAFVPISGWHGDNMLE S+KMPWF+ W+V++
Sbjct: 188 VAFVPISGWHGDNMLEVSSKMPWFKG--WTVER 218
Score = 103 bits (247), Expect = 2e-24
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +1
Query: 508 QGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVP 663
+GW VERKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGTVP
Sbjct: 212 KGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVP 263
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 177 bits (432), Expect = 6e-47
Identities = 83/93 (89%), Positives = 88/93 (94%)
Frame = +2
Query: 257 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA 436
SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAA
Sbjct: 55 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAA 114
Query: 437 VAFVPISGWHGDNMLEPSTKMPWFRDGRWSVKK 535
VAFVPISGWHGDNMLE S+KMPWF+ W+V++
Sbjct: 115 VAFVPISGWHGDNMLEVSSKMPWFKG--WTVER 145
Score = 115 bits (277), Expect = 4e-28
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 254
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 53
Score = 66.5 bits (155), Expect = 2e-13
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +1
Query: 508 QGWQVERKEGKADGKCLIEALDAILPPARPTDK 606
+GW VERKEGK +GKCLIEALDAILPP RPTDK
Sbjct: 139 KGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 177 bits (432), Expect = 6e-47
Identities = 83/93 (89%), Positives = 88/93 (94%)
Frame = +2
Query: 257 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA 436
SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAA
Sbjct: 71 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAA 130
Query: 437 VAFVPISGWHGDNMLEPSTKMPWFRDGRWSVKK 535
VAFVPISGWHGDNMLE S+KMPWF+ W+V++
Sbjct: 131 VAFVPISGWHGDNMLEVSSKMPWFKG--WTVER 161
Score = 148 bits (359), Expect = 4e-38
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = +3
Query: 48 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 227
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 228 AGTGEFEAG 254
AGTGEFEAG
Sbjct: 61 AGTGEFEAG 69
Score = 103 bits (247), Expect = 2e-24
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +1
Query: 508 QGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVP 663
+GW VERKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGTVP
Sbjct: 155 KGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVP 206
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 175 bits (427), Expect = 2e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 3 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 182
EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNM
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNM 102
Query: 183 ITGTSQADCAVLIVAAGTGEFEAG 254
ITGTSQADCAVLIVAAG GEFEAG
Sbjct: 103 ITGTSQADCAVLIVAAGIGEFEAG 126
Score = 169 bits (410), Expect = 3e-44
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +2
Query: 257 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA 436
SKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIGYN A+
Sbjct: 128 SKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTAS 187
Query: 437 VAFVPISGWHGDNMLEPSTKMPWFRDGRWSVKK 535
VAFVPISGWHGDNMLEPS K PW++ W V++
Sbjct: 188 VAFVPISGWHGDNMLEPSPKTPWYKG--WKVER 218
Score = 100 bits (240), Expect = 1e-23
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +1
Query: 508 QGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVP 663
+GW+VERK+G ADGK LIEALDAILPP+RPTDK LRLPLQDVYKIGGIGTVP
Sbjct: 212 KGWKVERKDGNADGKTLIEALDAILPPSRPTDKALRLPLQDVYKIGGIGTVP 263
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 135 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 239
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 120 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 221
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 120 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 221
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 538 CLLYAPPAIPEPRH 497
CL++ PP P P H
Sbjct: 434 CLIHGPPLPPLPLH 447
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 538 CLLYAPPAIPEPRH 497
CL++ PP P P H
Sbjct: 434 CLIHGPPLPPLPLH 447
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 496 FG*RLQHVVSVPSRNGHESDSSWV 425
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 339 WIPLNHHTVSPDLRKSRRKY 398
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,456
Number of Sequences: 438
Number of extensions: 4503
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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