Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00929
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    35   0.003
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    35   0.003
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   2.2  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   6.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   6.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   6.7  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.7  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   8.9  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 74  CPFCPALFKVKSALESHLSTKHADQ 148
           CP+CPA +     L SHL  KHAD+
Sbjct: 553 CPYCPASYSRIDTLRSHLRIKHADR 577


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 74  CPFCPALFKVKSALESHLSTKHADQ 148
           CP+CPA +     L SHL  KHAD+
Sbjct: 529 CPYCPASYSRIDTLRSHLRIKHADR 553


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 2   WFQNTRARERKGQFRA 49
           WFQN RA++RK + +A
Sbjct: 262 WFQNRRAKDRKQKKKA 277


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 71  RCPFCPALFKVKSALESHLSTKHADQ 148
           RC +CP        LESHL   H DQ
Sbjct: 356 RCEYCPYASISMRHLESHL-LLHTDQ 380


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 86  DKMDIFYL*LGHEPGIALFFPGLWCFE 6
           D+++I Y     E G AL  PGL C+E
Sbjct: 144 DRLNISY---AFENGTALEIPGLSCYE 167


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 86  DKMDIFYL*LGHEPGIALFFPGLWCFE 6
           D+++I Y     E G AL  PGL C+E
Sbjct: 145 DRLNISY---AFENGTALEIPGLSCYE 168


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 489  VRRR*ALDTASETMEFYEEDEPSSPIMAGQPQTPRPPGKRYRTQM 623
            V  R A + A+E     EE+E S P+    P++ R P     T+M
Sbjct: 1081 VLARAAANEAAEPTGEVEEEEVSPPVPPIPPRSRRLPPSPRTTEM 1125


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 2   WFQNTRARERKG 37
           WFQN R + +KG
Sbjct: 243 WFQNRRVKRKKG 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,684
Number of Sequences: 2352
Number of extensions: 15041
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)