Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00928
(665 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 123 1e-28
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 121 6e-28
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 118 6e-27
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 116 1e-26
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 114 7e-26
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 108 4e-24
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 90 1e-18
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 65 5e-11
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 31 0.82
08_02_0802 + 21386248-21387468 30 1.4
02_05_0469 + 29297209-29297527,29297847-29297961,29298060-292982... 30 1.4
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 5.8
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 28 5.8
03_02_0469 + 8720119-8720199,8720295-8720372,8720496-8720570,872... 28 7.7
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 123 bits (297), Expect = 1e-28
Identities = 59/91 (64%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLL 429
LSVAYKNV+GARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LL
Sbjct: 270 LSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLL 329
Query: 430 DKHLIPKASNPESKVFYLKMKGDYYRSLQKW 522
D HL+P ++ PESKVFYLKMKGDYYR L ++
Sbjct: 330 DSHLVPSSTAPESKVFYLKMKGDYYRYLAEF 360
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAE TG R E++ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYE
Sbjct: 357 LAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYE 408
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +2
Query: 113 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERN 253
S + +EE V AKLAEQAERY++M M++V +T EL+ EERN
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERN 268
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 121 bits (291), Expect = 6e-28
Identities = 57/91 (62%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLL 429
LSVAYKNV+GARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL
Sbjct: 52 LSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLL 111
Query: 430 DKHLIPKASNPESKVFYLKMKGDYYRSLQKW 522
+ HL+P ++ PESKVFYLKMKGDYYR L ++
Sbjct: 112 ESHLVPSSTAPESKVFYLKMKGDYYRYLAEF 142
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAE TG R E++ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYE
Sbjct: 139 LAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYE 190
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = +2
Query: 113 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERN 253
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERN
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERN 50
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 118 bits (283), Expect = 6e-27
Identities = 56/91 (61%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLL 429
LSVAYKNV+GARR+SWR++SSIEQK EG +E + KEYR K+E EL +IC +L LL
Sbjct: 46 LSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLL 105
Query: 430 DKHLIPKASNPESKVFYLKMKGDYYRSLQKW 522
D HL+P ++ ESKVFYLKMKGDY+R L ++
Sbjct: 106 DSHLVPSSTAAESKVFYLKMKGDYHRYLAEF 136
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/52 (59%), Positives = 36/52 (69%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAE TG R E + AY+ A +I+ A + PTHPIRLGLALNFSVFYYE
Sbjct: 133 LAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYE 184
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +2
Query: 128 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERN 253
+ +EE V AKLAEQAERY++M M++V +T EL+ EERN
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERN 44
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 116 bits (280), Expect = 1e-26
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLL 429
LSVAYKNV+GARR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LL
Sbjct: 51 LSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLL 110
Query: 430 DKHLIPKASNPESKVFYLKMKGDYYRSLQKW 522
D HL+P A+ ESKVFYLKMKGDY+R L ++
Sbjct: 111 DSHLVPSATAAESKVFYLKMKGDYHRYLAEF 141
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAE +G R E++ AY+ A +I+ A + THPIRLGLALNFSVFYYE
Sbjct: 138 LAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYE 189
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +2
Query: 116 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERN 253
S +EE V AKLAEQAERY++M M++V +T EL+ EERN
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERN 49
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 114 bits (274), Expect = 7e-26
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLL 429
LSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL IC +L LL
Sbjct: 29 LSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALL 88
Query: 430 DKHLIPKASNPESKVFYLKMKGDYYRSLQKW 522
D HL+P A ESKVFYLKMKGDY+R L ++
Sbjct: 89 DSHLVPSAGAAESKVFYLKMKGDYHRYLAEF 119
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAE +G+ R E + AY+ A +I+ A + PTHPIRLGLALNFSVFYYE
Sbjct: 116 LAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYE 167
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 108 bits (259), Expect = 4e-24
Identities = 52/91 (57%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLL 429
LSVAYKNV+GARR+SWR++SSIEQK EG + A+ YR +VE EL IC +L LL
Sbjct: 56 LSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLL 115
Query: 430 DKHLIPKASNPESKVFYLKMKGDYYRSLQKW 522
D+ L+P A+ ++KVFYLKMKGDY+R L ++
Sbjct: 116 DERLVPAAAAVDAKVFYLKMKGDYHRYLAEF 146
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAE TG R + + AYQ A +I+ ++ PTHPIRLGLALNFSVFYYE
Sbjct: 143 LAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYE 194
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Frame = +2
Query: 134 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERN 253
+EE+V AKLAEQAERY++M M++V G EL+ EERN
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERN 54
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/88 (44%), Positives = 59/88 (67%)
Frame = +1
Query: 259 SVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKH 438
SV +K +GARR+SWR++ S+EQK ++ Y+ KVE ELR +C +VL ++ H
Sbjct: 46 SVGFKKTIGARRASWRILESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIH 105
Query: 439 LIPKASNPESKVFYLKMKGDYYRSLQKW 522
+P A++ E+ VF+ KMKGDYYR L ++
Sbjct: 106 CLPLANSGENVVFFYKMKGDYYRYLAEF 133
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 131 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNPFQL 265
++E++V+ AKLAEQAERYDDM MK + V++S EER F +
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSV 47
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQK--TEGSERKQQMAKEYRVKVEKELREICYDVLGLL 429
LSV YKN++GA+R++ R+I SIE K T+G E + EYR KVE E+ +IC DV+ ++
Sbjct: 23 LSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINII 82
Query: 430 DK 435
DK
Sbjct: 83 DK 84
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 579 AFEISKAKMQPTHPIRLGLALNFSVFYYE 665
A + ++ + PT PIRLGLALN SVFY E
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCE 174
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 31.1 bits (67), Expect = 0.82
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 295 SSWRVISSIEQKTEGSERKQQMAKEYRVKVE--KELREICYD-VLGLLDKHLIPKASNPE 465
+ WR+++ + + E YRV ++ K+ I Y +GL+ ++ P
Sbjct: 111 AKWRILNRLHDRNE--------TLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPR 162
Query: 466 SKVFYLKMKGDYYRSLQKWPQEKPDILL 549
F K KG+ + WP EK D+++
Sbjct: 163 GMYFSAKDKGEMMSMIYNWPAEKVDMIV 190
>08_02_0802 + 21386248-21387468
Length = 406
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 187 RHGGRDEGSDGNRRRT*QRGEEPLSVAY--KNVVGARRSSWRVISSIEQKTEGSERKQ 354
R GRD GS G+ R R + LSV+ + V+ RR W+ S G +R Q
Sbjct: 208 RGRGRDTGSSGSSSREKDRADVGLSVSIDGERVLHVRRLRWKFRGSERVDLGGGDRVQ 265
>02_05_0469 +
29297209-29297527,29297847-29297961,29298060-29298255,
29298427-29298540,29298695-29298868,29299326-29299520,
29299666-29299788,29299892-29300004,29300117-29300237,
29300363-29300623,29301712-29301921
Length = 646
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 430 DKHLIPKASNPESKVFYLKMK---GDYYRSLQKWPQEKPDILL*RI 558
D +L+P +PES YL+M+ G Y ++W + P I+ RI
Sbjct: 275 DIYLLPPGEDPESCQSYLRMRNREGKYNLMFEEWVTDNPFIISPRI 320
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +1
Query: 391 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 495
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 51 CLHSKTAGFNNSGISELVLF 110
C + +AGFN +SELVLF
Sbjct: 154 CARASSAGFNPDSVSELVLF 173
>03_02_0469 +
8720119-8720199,8720295-8720372,8720496-8720570,
8720666-8720796,8720948-8721002,8721107-8721217,
8721538-8721606,8721687-8721794,8722106-8722174,
8722266-8722320,8722499-8722701
Length = 344
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 157 GTLHQFFLVDGHRGRWKRT-NSLMPELLKPAVLECKHYFFF 38
G + Q LV H G W+R LMP L+ A + +Y+F+
Sbjct: 46 GAVRQMCLVVKHEG-WERLYGGLMPSLVGTAASQGVYYYFY 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,094,650
Number of Sequences: 37544
Number of extensions: 368213
Number of successful extensions: 1184
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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