Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00928
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 155 4e-38
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 155 4e-38
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 147 5e-36
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 146 2e-35
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 5.2
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 28 5.2
Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical pr... 27 9.1
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 155 bits (375), Expect = 4e-38
Identities = 76/86 (88%), Positives = 78/86 (90%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 435
LSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK
Sbjct: 46 LSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDK 105
Query: 436 HLIPKASNPESKVFYLKMKGDYYRSL 513
LIPKA ESKVFYLKMKGDYYR L
Sbjct: 106 FLIPKAGAAESKVFYLKMKGDYYRYL 131
Score = 88.6 bits (210), Expect = 3e-18
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIRLGLALNFSVF+YE
Sbjct: 131 LAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYE 182
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2
Query: 122 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERN 253
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERN
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERN 44
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 155 bits (375), Expect = 4e-38
Identities = 76/86 (88%), Positives = 78/86 (90%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 435
LSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK
Sbjct: 46 LSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDK 105
Query: 436 HLIPKASNPESKVFYLKMKGDYYRSL 513
LIPKA ESKVFYLKMKGDYYR L
Sbjct: 106 FLIPKAGAAESKVFYLKMKGDYYRYL 131
Score = 88.6 bits (210), Expect = 3e-18
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIRLGLALNFSVF+YE
Sbjct: 131 LAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYE 182
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2
Query: 122 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERN 253
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERN
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERN 44
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 147 bits (357), Expect = 5e-36
Identities = 78/122 (63%), Positives = 91/122 (74%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 435
LSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+
Sbjct: 46 LSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDE 105
Query: 436 HLIPKASNPESKVFYLKMKGDYYRSLQKWPQEKPDILL*RIHRKHTKMLLKSARRKCSPH 615
LI KA ESKVFYLKMKGDYYR L + E ++ + + + + L A+ K P
Sbjct: 106 FLIVKAGAAESKVFYLKMKGDYYRYLAEVASEDRAAVVEKSQKAYQE-ALDIAKDKMQPT 164
Query: 616 TP 621
P
Sbjct: 165 HP 166
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAEVA+ E R +VVE SQKAYQ+A +I+K KMQPTHPIRLGLALNFSVFYYE
Sbjct: 131 LAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYE 181
Score = 74.9 bits (176), Expect = 5e-14
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +2
Query: 122 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERN 253
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERN
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERN 44
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 146 bits (353), Expect = 2e-35
Identities = 77/122 (63%), Positives = 90/122 (73%)
Frame = +1
Query: 256 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 435
LSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+
Sbjct: 46 LSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDE 105
Query: 436 HLIPKASNPESKVFYLKMKGDYYRSLQKWPQEKPDILL*RIHRKHTKMLLKSARRKCSPH 615
LI KA ESK FYLKMKGDYYR L + E ++ + + + + L A+ K P
Sbjct: 106 FLIVKAGAAESKAFYLKMKGDYYRYLAEVASEDRAAVVEKSQKAYQE-ALDIAKDKMQPT 164
Query: 616 TP 621
P
Sbjct: 165 HP 166
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +3
Query: 510 LAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
LAEVA+ E R +VVE SQKAYQ+A +I+K KMQPTHPIRLGLALNFSVFYYE
Sbjct: 131 LAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYE 181
Score = 74.9 bits (176), Expect = 5e-14
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +2
Query: 122 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERN 253
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERN
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERN 44
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +3
Query: 537 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 665
R S+ AYQ+A I+K KMQPTHPIRLGLALN S ++
Sbjct: 17 REEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFD 59
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +1
Query: 265 AYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREI 405
A K+ + A++ R+ ++K E ERK++ +E + + E+E+REI
Sbjct: 984 AEKDRIEAKKFEERMKKE-QEKQEEKERKEREKREEKERKEREIREI 1029
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 145 QFFLVDGHRGRWKRTNSLMP-ELLKPAVLECKHYFFFISNHL 23
QFFL D +G + +++P L++ AV K+Y FF+S +
Sbjct: 975 QFFLEDPSQGYESQGYNVLPGTLIEDAVTTNKYYDFFLSTQI 1016
>Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical
protein ZK1128.2b protein.
Length = 464
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 271 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 369
KNV+GAR+ +W+ I+ T+G E+ ++A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127
>Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 616 CVGCIFALLISKASWYAFCESSTTECLVS 530
C GC+ + I ASW +C S + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
protein F20D12.2 protein.
Length = 1116
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +1
Query: 322 EQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDY 501
E+K + E+++ +AKE +KVEKE+ E + ++D + + E K+ + ++ G +
Sbjct: 757 EKKLKRIEQEKNIAKELVLKVEKEISENALRM--IIDDEIRRERRERERKMAH-EIVGKF 813
Query: 502 YRSLQK 519
+R + K
Sbjct: 814 WRVVLK 819
>AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 616 CVGCIFALLISKASWYAFCESSTTECLVS 530
C GC+ + I ASW +C S + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,454,173
Number of Sequences: 27780
Number of extensions: 318504
Number of successful extensions: 995
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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