Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00927
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 32 0.55
U00058-5|AAA50730.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF040643-12|AAB94964.2| 658|Caenorhabditis elegans Hypothetical... 28 6.8
AF125951-3|AAY86273.1| 244|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 142 bits (345), Expect = 2e-34
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +3
Query: 15 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 194
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 195 TCQVAYSRIEGDHIVCAAYS 254
Q+AYS+IEGD +V +AYS
Sbjct: 61 VAQLAYSKIEGDVVVASAYS 80
Score = 115 bits (276), Expect = 5e-26
Identities = 52/95 (54%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +1
Query: 502 EGSVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 681
+G DGG+NVPHS RF G+D ESK++NAE HR I G HVA+YM L+++DED +KRQF
Sbjct: 163 KGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQF 222
Query: 682 SKYIKLGVTADAIEAIYKKAHEAIRAD-HPTRRKS 783
SK++ G+ AD + A Y+K H AIRAD P +K+
Sbjct: 223 SKFLAAGLNADNLVATYQKVHSAIRADASPAAKKA 257
Score = 75.4 bits (177), Expect = 5e-14
Identities = 38/86 (44%), Positives = 49/86 (56%)
Frame = +2
Query: 254 NELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG 433
+ELPRYG+KVGLTNYAAAY+TG +YNVE +
Sbjct: 81 HELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRA 139
Query: 434 AFRCYLDVGLARTTTGARVFGAMKGL 511
F+ LD+GLARTTTG+++F MKG+
Sbjct: 140 PFKAVLDIGLARTTTGSKIFAVMKGV 165
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 264 GNSLNKQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 136
G+ +QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 975 GSGQKRQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 264 GNSLNKQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 136
G+ +QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 975 GSGQKRQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>U00058-5|AAA50730.1| 309|Caenorhabditis elegans Hypothetical
protein W03A5.4 protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 528 IEATVNRPFIAPKTRAPVVVRAK 460
I++T NRP IAPKTR PV + K
Sbjct: 237 IDSTTNRPPIAPKTR-PVTAKKK 258
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 496 SYEGSVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 675
++ G+V G N+ + + GYD FN+E+ A + E + E +D + K
Sbjct: 266 TFNGTVFGEANMSRKLVQQEGYDLSHPTFNSEIRAAFKYNA-TTETFLTFETNDTIAAKI 324
Query: 676 QFSKYIKLG 702
+ K LG
Sbjct: 325 DYVKDRILG 333
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 144 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSMSCHVMV 275
YN P+YR +++L K C+ + GD++ +CA + H ++
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETELHKLM 592
>AF040643-12|AAB94964.2| 658|Caenorhabditis elegans Hypothetical
protein F14D2.9 protein.
Length = 658
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 661 DSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADHPTRR 777
D R S+YIK T+D IE + KK +E ++ RR
Sbjct: 408 DDLVRVSSEYIKFPTTSDEIETMTKKFYEKEDSNGEERR 446
>AF125951-3|AAY86273.1| 244|Caenorhabditis elegans Hypothetical
protein D2063.4 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = -3
Query: 732 VDGFNSICSDS*FYVLAELSLERILIILFK--TSHVFSNMQTKDVSPVYFSIELF 574
VDGF ++CS S V + L ++++ +L + +HV ++ ++++ + IE++
Sbjct: 53 VDGFRNVCSGSDLSVRSNLDVKQLSELLKEDPCTHVAGDVVIENLTDIAIPIEVY 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,364,746
Number of Sequences: 27780
Number of extensions: 386483
Number of successful extensions: 968
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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