Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00925
(825 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01490.1 68414.m00065 heavy-metal-associated domain-containin... 36 0.033
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 36 0.043
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 36 0.043
At4g26630.1 68417.m03837 expressed protein 35 0.057
At5g22840.1 68418.m02670 protein kinase family protein contains ... 33 0.17
At2g22795.1 68415.m02704 expressed protein 33 0.17
At4g31880.1 68417.m04531 expressed protein 33 0.23
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 33 0.23
At5g11980.1 68418.m01401 conserved oligomeric Golgi complex comp... 33 0.30
At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putati... 33 0.30
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 32 0.40
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 32 0.40
At4g36980.1 68417.m05240 expressed protein 32 0.40
At4g12610.1 68417.m01987 transcription initiation factor IIF alp... 32 0.53
At2g25670.2 68415.m03077 expressed protein 32 0.53
At2g25670.1 68415.m03076 expressed protein 32 0.53
At5g64910.1 68418.m08165 expressed protein ; expression support... 31 0.70
At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH) domain... 31 0.93
At1g68030.1 68414.m07772 PHD finger protein-related contains low... 31 0.93
At1g13030.1 68414.m01511 sphere organelles protein-related conta... 31 0.93
At1g76820.1 68414.m08939 expressed protein 30 1.6
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 30 1.6
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 30 2.1
At5g19950.3 68418.m02375 expressed protein 30 2.1
At5g19950.2 68418.m02374 expressed protein 30 2.1
At5g19950.1 68418.m02373 expressed protein 30 2.1
At4g00238.1 68417.m00030 DNA-binding storekeeper protein-related... 30 2.1
At3g28770.1 68416.m03591 expressed protein 30 2.1
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 30 2.1
At5g61610.1 68418.m07731 glycine-rich protein / oleosin similar ... 29 2.8
At5g21430.1 68418.m02535 DNAJ heat shock N-terminal domain-conta... 29 2.8
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 29 2.8
At4g00580.1 68417.m00081 COP1-interacting protein-related simila... 29 2.8
At3g18035.1 68416.m02292 histone H1/H5 family protein contains P... 29 2.8
At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi... 29 3.7
At3g51270.1 68416.m05612 RIO1 family protein contains Pfam profi... 29 3.7
At2g04330.1 68415.m00429 hypothetical protein contains Pfam prof... 29 3.7
At1g54960.1 68414.m06277 NPK1-related protein kinase, putative (... 29 3.7
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 29 5.0
At4g03565.1 68417.m00490 expressed protein 29 5.0
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 29 5.0
At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger) fa... 29 5.0
At1g56660.1 68414.m06516 expressed protein 29 5.0
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 28 6.5
At4g02760.1 68417.m00376 F-box family protein contains Pfam PF00... 28 6.5
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 28 6.5
At3g59990.2 68416.m06698 methionyl aminopeptidase, putative / me... 28 6.5
At3g59990.1 68416.m06697 methionyl aminopeptidase, putative / me... 28 6.5
At3g01320.1 68416.m00045 paired amphipathic helix repeat-contain... 28 6.5
At1g17370.1 68414.m02118 oligouridylate-binding protein, putativ... 28 6.5
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 28 8.7
At4g07380.1 68417.m01133 hypothetical protein 28 8.7
At3g24630.1 68416.m03093 hypothetical protein 28 8.7
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 28 8.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 28 8.7
>At1g01490.1 68414.m00065 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 177
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +1
Query: 61 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDA 240
M D + PE+ EPK+ + P K+ EA + GK+ G E+ E GD
Sbjct: 62 MTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKKEGEAPKKEEEKKEGGDK 121
Query: 241 EESNE 255
+E +
Sbjct: 122 KEGEK 126
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 79 DKKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNE 255
+ KE PE E + K+ +K E +S+ +E +E PE+ E ++E NE
Sbjct: 328 ESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENE 387
Query: 256 HLRTVMPQKRKRLV*RGN 309
T + +K + GN
Sbjct: 388 IKETEIKEKEESSSQEGN 405
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 35.5 bits (78), Expect = 0.043
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 118 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEHLRTVMPQKRKRL 294
EPK+ +E+ +S+ +ENG ED +G+ E+ +E +KRKRL
Sbjct: 31 EPKKRRKVSYDDDDIESVDSDAEENGFTGGDEDGRRVDGEVEDEDEFADETAGEKRKRL 89
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 35.1 bits (77), Expect = 0.057
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKEN-------GTDEAPEDSPAENG 234
V KK +A + S E KE K+ K E E +EN DEAP+ P+E+
Sbjct: 511 VVKKSLAHSDDESEEEKEEEEKQEEEKAEEKEEKKEEENENGIPDKSEDEAPQ--PSESE 568
Query: 235 DAEESNEHLRTVMPQKRK 288
+ +ES EH +K++
Sbjct: 569 EKDESEEHSEEETTKKKR 586
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 76 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNE 255
V+ KE +E T+ E+ + KVE + ++ +E E A+ + EE+N+
Sbjct: 212 VEGKEKEDKEENKTKEVEAAKAEVDESKVEDEKEGSEDENDNEKVESKDAKEDEKEETND 271
>At5g22840.1 68418.m02670 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 538
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Frame = +1
Query: 52 LATMADAAVDKKEVAPEEVTS-------TEPKESPVKKSPAKKVEAAESNGKENGTDEAP 210
L T+ D AV ++ V E+ S T+ ++ ++K AKKVE +E N +++ EA
Sbjct: 203 LPTVKDKAVPERPVEKEKPKSYTYSADLTKNQKKKIRKK-AKKVEGSEENERDSSNSEAR 261
Query: 211 EDSPAENGDAEESNEHLR 264
+ A EES+E ++
Sbjct: 262 PNGNATVERLEESSERVK 279
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 100 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEHLRTVMPQ 279
E V + K+ V+++ K E + KEN + + E + EESN++ T + Q
Sbjct: 635 ENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVTQ 694
Query: 280 KR 285
++
Sbjct: 695 EQ 696
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 82 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEES 249
K+ EE + +ES V++ K E + +++GT+E+ + +NG +EES
Sbjct: 213 KENGGTEENEKSGSEESEVEEK--KDNGGTEESREKSGTEESEVEEKKDNGSSEES 266
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGK-ENGTDEAPEDSPAENGDAEE 246
A+ KKE + TS++ K PVK PAK + GK ++G+ P E+ E
Sbjct: 785 ASSKKKEEPSKATTSSKSKSGPVKSVPAK---SKTGKGKAKSGSASTPASKAKESASESE 841
Query: 247 SNE 255
S E
Sbjct: 842 SEE 844
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +1
Query: 79 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAA-----ESNGKENGTDEAPEDSPAENGDAE 243
DKKE EEV S PK KK +K EAA ES +++ + +D +N D+E
Sbjct: 504 DKKEEVIEEVAS--PKSEKKKKKKSKDTEAAVDAEDESAAEKSEKKKKKKDKKKKNKDSE 561
Query: 244 ESNE 255
+ E
Sbjct: 562 DDEE 565
>At5g11980.1 68418.m01401 conserved oligomeric Golgi complex
component-related / COG complex component-related
similar to SP|Q96MW5 Conserved oligomeric Golgi complex
component 8 {Homo sapiens}; contains Pfam profile
PF04124: Dor1-like family
Length = 569
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 106 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDA-EESNEHLRTVMPQ 279
+ + + P KSP K + + ENG PE+ AEN +A EE N + P+
Sbjct: 507 ILAASSSQEPSNKSP-KVISTDTKDASENGVASQPEEKQAENPNAKEEDNSPIPLQTPE 564
>At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putative
(COX6b) nearly identical to subunit 6b of cytochrome c
oxidase [Arabidopsis thaliana] GI:6518353
Length = 191
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 79 DKKEVAPE--EVTSTEPK--ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 228
+K E APE EV S P E +++PA AAE N EN ++E E++P E
Sbjct: 67 EKSESAPESTEVASEAPAAAEDNAEETPA----AAEENNDENASEEVAEETPDE 116
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +1
Query: 76 VDKKEVAPEEVTSTE-------PKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 234
V+ KEVAPE T E +ESPV+++ + E +ES T+ A E A
Sbjct: 31 VEVKEVAPEVTTQAEEVKTEQAKEESPVEEAVSVVEEKSES--APESTEVASEAPAAAED 88
Query: 235 DAEES 249
+AEE+
Sbjct: 89 NAEET 93
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 115 TEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG-DAEESN 252
T+PK P + PA++ ++ + + DE+ ED +E G D +E +
Sbjct: 53 TKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDD 99
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 115 TEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG-DAEESN 252
T+PK P + PA++ ++ + + DE+ ED +E G D +E +
Sbjct: 136 TKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDD 182
>At4g36980.1 68417.m05240 expressed protein
Length = 560
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 76 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES-NGKENGTDEAPEDSPAENGDAEESN 252
++ K AP T T+P + P K +V + + NGK+N D +D + D +E
Sbjct: 142 LEAKLAAPFLGTRTQPAQPPANKGTYSQVGFSYAGNGKDNSLDADEDDVDDDEDDEDEEE 201
Query: 253 E 255
E
Sbjct: 202 E 202
>At4g12610.1 68417.m01987 transcription initiation factor IIF alpha
subunit (TFIIF-alpha) family protein low similarity to
SP|Q05913 Transcription initiation factor IIF, alpha
subunit (TFIIF-alpha) (Transcription factor 5, large
chain) (TF5A) {Drosophila melanogaster}; contains Pfam
profile PF05793: Transcription initiation factor IIF,
alpha subunit (TFIIF-alpha)
Length = 543
Score = 31.9 bits (69), Expect = 0.53
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +1
Query: 94 APEEVTSTEPKESPVKKSPAKKVEAAESN---GKENGTDEAPEDSPAENGDAEESNEHLR 264
AP E+ E E ++ E GK NG DE+ ED ++ D EE+N
Sbjct: 317 APPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGTV 376
Query: 265 TVMPQK 282
T QK
Sbjct: 377 TNSKQK 382
>At2g25670.2 68415.m03077 expressed protein
Length = 318
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/70 (21%), Positives = 32/70 (45%)
Frame = +1
Query: 82 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEHL 261
K+ A E +++ K+ K+ K+ + ++N + DEA P E + E +
Sbjct: 209 KENAAGGESKASKKKKKKDKQKEVKESQEQQANNNADAVDEAAGSEPTEEESPIDVKERI 268
Query: 262 RTVMPQKRKR 291
+ + K+K+
Sbjct: 269 KKLASMKKKK 278
>At2g25670.1 68415.m03076 expressed protein
Length = 318
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/70 (21%), Positives = 32/70 (45%)
Frame = +1
Query: 82 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEHL 261
K+ A E +++ K+ K+ K+ + ++N + DEA P E + E +
Sbjct: 209 KENAAGGESKASKKKKKKDKQKEVKESQEQQANNNADAVDEAAGSEPTEEESPIDVKERI 268
Query: 262 RTVMPQKRKR 291
+ + K+K+
Sbjct: 269 KKLASMKKKK 278
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 31.5 bits (68), Expect = 0.70
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +1
Query: 79 DKKEV-APEEVTSTEPKESPVKKSPAKKVE--AAESNGKENGTDEAPEDSPAENGDA--E 243
DK E APEE E + + ++ A KVE AAE G E +EA ED E +A E
Sbjct: 54 DKVESPAPEEEGKNEEEANENQEEEAAKVESKAAEEGGNE---EEAKEDKEEEKEEAARE 110
Query: 244 ESNEHLRTVMPQK 282
+ E V P +
Sbjct: 111 DKEEEEEAVKPDE 123
>At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related low similarity to clathrin assembly
protein AP180 [Xenopus laevis] GI:6492344; contains Pfam
profile PF01417: ENTH domain
Length = 591
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 124 KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEHLRTVMPQKRK 288
KE+P S KK+E E +E +E + PAE + E+ E+ + ++ ++ +
Sbjct: 307 KEAPQSGSVQKKLEYQEKEEEEQEQEEEQPEEPAEEENQNENTENDQPLIEEEEE 361
>At1g68030.1 68414.m07772 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 314
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 127 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEHLR 264
E+ + SP + E S+GKEN P D P G EE R
Sbjct: 150 ENDTQVSPCSEEETLRSDGKENDRVTPPMDEPDLTGRTEEGESFSR 195
>At1g13030.1 68414.m01511 sphere organelles protein-related contains
weak similarity to Swiss-Prot:Q09003 sphere organelles
protein SPH-1 (Sphere protein 1) [Xenopus laevis]
Length = 608
Score = 31.1 bits (67), Expect = 0.93
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 76 VDKKEVAPEEVTSTEPKESPVKKSPAKK---VEAAESNGKENGTDEAPEDSPAENGDAEE 246
+D E +P+E +T + VKK KK V++A +N ++N P + EE
Sbjct: 181 LDTTEESPDERENTAVVSNVVKKKKKKKSLDVQSA-NNDEQNNDSTKPMTKSKRSSQQEE 239
Query: 247 SNEH 258
S EH
Sbjct: 240 SKEH 243
>At1g76820.1 68414.m08939 expressed protein
Length = 266
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 61 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVE--AAESNGKENGTDEA-PED-SPAE 228
+ ++A KK + T ++ + K A+ E AA E D+A PE +P E
Sbjct: 167 LVESARSKKHKKKNKSGRTLQEDDDLDKLLAELGETPAAGKPASEEEKDQAQPEPVAPVE 226
Query: 229 NGDAEESNEHLRTVMPQKRKR 291
N +E LR + P+KRKR
Sbjct: 227 NTGEKEKRRLLRLLQPRKRKR 247
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 100 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNE 255
++V + KE VKK P KKVE+++ + E+ +E + PA+ A S+E
Sbjct: 42 KDVIAAVQKEKAVKKVP-KKVESSDDSDSESEEEEKAKKVPAKKA-ASSSDE 91
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 82 KKEVAPEEVTSTEPKESPVKKSPAK--KVEAAESNGKENGTDEAPED 216
KKE + E+ +S+E + P KK AK K A +S+ ++ +DE ED
Sbjct: 153 KKESSSEDDSSSE--DEPAKKPAAKIAKPAAKDSSSSDDDSDEDSED 197
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 76 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNE 255
+D+ E PE+V + + V+++ +K E + GKE +E E + D +E E
Sbjct: 309 IDENET-PEKVDTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVE 367
>At5g19950.3 68418.m02375 expressed protein
Length = 441
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +1
Query: 127 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG---DAEESNEHLRTVMPQKRKRLV 297
ES VK + +K E++E +G + GT++ + +PA++ E N+ R+ + K++V
Sbjct: 237 ESSVKHAGGEKGESSEVDGNKRGTNKNIQRNPADSDPKISVEVENQEKRSSSDTRPKQVV 296
>At5g19950.2 68418.m02374 expressed protein
Length = 443
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +1
Query: 127 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG---DAEESNEHLRTVMPQKRKRLV 297
ES VK + +K E++E +G + GT++ + +PA++ E N+ R+ + K++V
Sbjct: 237 ESSVKHAGGEKGESSEVDGNKRGTNKNIQRNPADSDPKISVEVENQEKRSSSDTRPKQVV 296
>At5g19950.1 68418.m02373 expressed protein
Length = 443
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +1
Query: 127 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG---DAEESNEHLRTVMPQKRKRLV 297
ES VK + +K E++E +G + GT++ + +PA++ E N+ R+ + K++V
Sbjct: 237 ESSVKHAGGEKGESSEVDGNKRGTNKNIQRNPADSDPKISVEVENQEKRSSSDTRPKQVV 296
>At4g00238.1 68417.m00030 DNA-binding storekeeper protein-related
contains Pfam PF04504: Protein of unknown function,
DUF573; similar to storekeeper protein GI:14268476
[Solanum tuberosum]
Length = 345
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 127 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNE 255
ESP KS KK AAES ++G +E +SPA + ++E
Sbjct: 76 ESPAVKS-GKKEGAAESPAVKSGNNEGATESPAVKSGKKRASE 117
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 79 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEH 258
DKKE E+ E + KS K++ E N K+N + EDS ++N + +E E
Sbjct: 962 DKKEYVNNELKKQEDNKKETTKSENSKLK--EEN-KDNKEKKESEDSASKNREKKEYEEK 1018
Query: 259 LRTVMPQKRK 288
+ +K
Sbjct: 1019 KSKTKEEAKK 1028
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 91 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDS 219
V PEE++ ++PK+S A+K+E N KE T E P D+
Sbjct: 302 VNPEEISESKPKQS--VDEVARKIEGFHIN-KEGKTAEKPSDA 341
>At5g61610.1 68418.m07731 glycine-rich protein / oleosin similar to
variable surface lipoprotein Vsp422-3 (GI:15384285)
[Mycoplasma bovis]; similar to glycine-rich protein
atGRP-6, Arabidopsis thaliana, PIR:T49893
Length = 225
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +1
Query: 100 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEHLRTVMP 276
E+ E ++ P K PA+ + + + G ED P + E ++H+ MP
Sbjct: 150 EDKLPAEEEKPPQKDKPAEGHKPPQKDKPAEGDKPVEEDKPPQKDKPAEGDKHVEEDMP 208
>At5g21430.1 68418.m02535 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile: PF00226
DnaJ domain;
Length = 218
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 130 SPVKKSPAKKVEAAESNGKENGTDEAPEDSPA 225
SP + S EA G DEAP++SP+
Sbjct: 44 SPARNSSEVSAEAETEGGSSTAVDEAPKESPS 75
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 67 DAAVDKKEVAP--EEVTSTEPKES-PVKKS-PAKKVEAAESNGKENGTDEAPEDSPAENG 234
+ A KE AP +E T KE+ P K++ PA K A + + T++ PE+ E
Sbjct: 28 ETAPATKETAPATKETAPTITKETAPTKETAPATKETAPTRTEEPSLTEQDPENVEEEES 87
Query: 235 DAEESNE 255
+ EE E
Sbjct: 88 EEEEKEE 94
>At4g00580.1 68417.m00081 COP1-interacting protein-related similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646
Length = 317
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 64 ADAAVDKKEVAPEEVTSTEP--KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGD 237
++A ++ E++ +E E E P KK+ AKKV+ KE+G + + E+G
Sbjct: 229 SEAIENETEMSVKEKDGDEEAKSEKPKKKNRAKKVKTPT---KEDGLVASSSRNAEEDGV 285
Query: 238 AEESNEHLRTVMPQKRKR 291
+ + E++ V+ + KR
Sbjct: 286 SRDPQENVAKVVKKPNKR 303
>At3g18035.1 68416.m02292 histone H1/H5 family protein contains Pfam
domain, PF00538: linker histone H1 and H5 family;similar
to HMG I/Y like protein (GI:15706274) [Glycine
max];similar to HMR1 protein (GI:4218141) [Antirrhinum
majus]; similar to high mobility group protein
(GI:1483173) [Canavalia gladiata]
Length = 480
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 67 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES-NGKENGTDEAPEDSPAENGDA 240
+A + V P+ + +P+E+ ++ A++ EAAE+ G+E G + E +A
Sbjct: 416 EALTVTETVEPQVMEEVQPEETAAPQTEAQQTEAAETQGGQEEGQEREGETQTQTEAEA 474
>At5g63530.1 68418.m07974 copper chaperone (CCH)-related low
similarity to copper homeostasis factor [GI:3168840];
nearly identical to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 355
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 79 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEES 249
+KK A EE E K K+ KKV+ AE G++ +D+ P++ + E+S
Sbjct: 5 EKKPEAAEEKKMEEKKPEEKKEGEDKKVD-AEKKGED--SDKKPQEGESNKDSKEDS 58
>At3g51270.1 68416.m05612 RIO1 family protein contains Pfam profile
PF01163: RIO1 family
Length = 472
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 103 EVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNEHLRTVMPQK 282
E+ S + ++ K S + E E + ENG ED N + EE L + +
Sbjct: 374 EIKSLQLQDKEQKSSDGVEAEV-ELDNTENGESNGDEDEVGSNEEEEEKEAELEKNLGKV 432
Query: 283 RKR 291
R+R
Sbjct: 433 RRR 435
>At2g04330.1 68415.m00429 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 564
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Frame = +1
Query: 58 TMADAAVDKKEVAPEEVTSTEPKESPVKKSP---------AKKVEAAESNGKENGTDEAP 210
T+A A +T+T P +P +SP A K AE + TDE
Sbjct: 75 TIATAMATNAAPTTAALTTTAPTTAPTTESPMLDDSTFYDALKHIPAEETQENMQTDEVE 134
Query: 211 EDSPAENGDAEESNEHLRTVMP 276
+++ E G E+N+ L P
Sbjct: 135 DENEKEEGKETETNKELACANP 156
>At1g54960.1 68414.m06277 NPK1-related protein kinase, putative
(ANP2) similar to protein kinase [Nicotiana tabacum]
gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
protein kinase 2, partial cds GI:2342424
Length = 596
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 79 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAE-SNGKENGTDE-APEDSPAENGDAEESN 252
D+ E+ ++ + + + +SP++ +AA S E+G AP++S A G +ESN
Sbjct: 480 DENELTESKIKAFLDDKGHIGRSPSRATDAACCSKSPESGNSSGAPKNSNASAGAEQESN 539
Query: 253 EHLRTVMPQKRK 288
+ +RK
Sbjct: 540 SQSVALSEIERK 551
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +1
Query: 55 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 234
A + A + EV P+ +PKE PV A K +A + E D + A++
Sbjct: 393 AAPSKATPSETEVVPKAKAKPQPKEEPVS---APKPDATVAQNTEKAKDAVKVKNVADDD 449
Query: 235 DAE 243
D E
Sbjct: 450 DDE 452
>At4g03565.1 68417.m00490 expressed protein
Length = 263
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 100 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNE 255
++++ ++ +E K+ E ESNG+E DE +S E D ++ NE
Sbjct: 21 KDISDSDTREDDYSSDGEKEGEDYESNGEEG--DEYDGESNEEEDDDDDDNE 70
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +1
Query: 100 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE----APEDSPAENGDA 240
+E S+E +E VK + + E E+ + +G+D+ A ++SP +G+A
Sbjct: 8 DEAFSSEEEEERVKDNEEEDEEELEAVARSSGSDDDEVAAADESPVSDGEA 58
>At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 52 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 231
L T + V + EV P EP+E PV +P VE + N T EA S ++N
Sbjct: 140 LTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVET-----RLNLTVEAASSSSSDN 194
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 79 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 228
+K E PEE KE + +K E E +GK+N E E E
Sbjct: 140 EKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEE 189
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/63 (22%), Positives = 35/63 (55%)
Frame = +1
Query: 67 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 246
DA++ K++ + + + E K+ +K+ + ++E+ + G ++ +DS +ENG +
Sbjct: 93 DASLPKEDESSSKQDNQEEKKE--EKTKEEFTPSSETKSETEGGEDQKDDSKSENGGGGD 150
Query: 247 SNE 255
+E
Sbjct: 151 LDE 153
>At4g02760.1 68417.m00376 F-box family protein contains Pfam
PF00646: F-box domain; similar to leucine-rich repeats
containing F-box protein FBL3 (GI:5919219) [Homo
sapiens]
Length = 419
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 103 EVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNE 255
E S P ES V+ SP+ + S+ ++ + + +S E+G EE +E
Sbjct: 369 EFRSPSPSESDVR-SPSPSSSSDSSSSSDSSSSSSSGESSDESGTEEEEDE 418
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 DKKEVAPEEVTSTEPKE-SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNE 255
D + EE + TE K + KKS A ++ + N + G + ++ +G+ ++ N+
Sbjct: 305 DDDDDEKEENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKETTSKNQKKNDGNVKKEND 364
Query: 256 H 258
H
Sbjct: 365 H 365
>At3g59990.2 68416.m06698 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +1
Query: 67 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 246
D AV V S+ KE ++ +KK+E AE +EN +E + + ++
Sbjct: 7 DVAVVAPVVENGGAESSNGKEEQLESELSKKLEIAEDGQEENDGEEGSKAETSTKKKKKK 66
Query: 247 SNEHLRTVMPQK 282
+ + +PQ+
Sbjct: 67 NKSKKKKELPQQ 78
>At3g59990.1 68416.m06697 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +1
Query: 67 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 246
D AV V S+ KE ++ +KK+E AE +EN +E + + ++
Sbjct: 7 DVAVVAPVVENGGAESSNGKEEQLESELSKKLEIAEDGQEENDGEEGSKAETSTKKKKKK 66
Query: 247 SNEHLRTVMPQK 282
+ + +PQ+
Sbjct: 67 NKSKKKKELPQQ 78
>At3g01320.1 68416.m00045 paired amphipathic helix repeat-containing
protein low similarity to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1378
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 64 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 243
ADA V+ ++ A ++V S E+ +S E +ENG + + G+AE
Sbjct: 1002 ADAEVENEDDA-DDVDSENASEASGTESGGDVCSQDEDREEENGEHDEIDGKAESEGEAE 1060
Query: 244 ESNEHL 261
+ HL
Sbjct: 1061 GMDPHL 1066
>At1g17370.1 68414.m02118 oligouridylate-binding protein, putative
similar to oligouridylate binding protein [Nicotiana
plumbaginifolia] GI:6996560; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 419
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 94 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDS 219
A + TS E K+S KS + +GK+ EAPE++
Sbjct: 215 ATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENN 256
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Frame = +1
Query: 82 KKEVAPEEVTSTEPKESPVK----KSP--AKKVEAA-ESNGKENGTDEAPEDSPAENGDA 240
KK+ EE T EP ES K K+P KK EA E ++ + ++ +
Sbjct: 769 KKQSDGEEETQKEPSESTKKERKRKNPESKKKAEAVEEEETRKESVESTKKERKRKKPKH 828
Query: 241 EESNEHLRTVMPQKRKR 291
+E T P+K+K+
Sbjct: 829 DEEEVPNETEKPEKKKK 845
>At4g07380.1 68417.m01133 hypothetical protein
Length = 168
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 79 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTD 201
D + + EEV+ E + K K E ++NG++NGT+
Sbjct: 85 DPSQQSNEEVSQEEVMVNEETKEVDKMEEETQTNGEDNGTE 125
>At3g24630.1 68416.m03093 hypothetical protein
Length = 724
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 97 PEEVTSTEPKESPVKKSPAKKVEAAESNG-KENGTDEAPEDSPAENGDAEESNEHLRTVM 273
P+ + + ++ VKK+ + E N +E PE++P+EN +R V
Sbjct: 276 PDILKLSSERQEKVKKNSKESPEIVRCNSTREAALQSLPEETPSENPSTIVLIRPMRVVK 335
Query: 274 PQ 279
P+
Sbjct: 336 PE 337
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 163 EAAESNGKENGTDEAPEDSPAENGDAEESNE 255
E + N +ENG DE +D E +E NE
Sbjct: 188 ENDDENTEENGNDEENDDENTEENGNDEENE 218
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 55 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 234
A A A+ + EEV E +ESP+ S KK ++++S+ K + A E
Sbjct: 161 AASAFDALGSDDDDTEEVHEDEEEESPITFS-GKKKKSSKSSKKNTNSFTADLLDEEEGT 219
Query: 235 DAEESNEHLRTV 270
DA S + T+
Sbjct: 220 DASNSRDDENTI 231
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,060,428
Number of Sequences: 28952
Number of extensions: 278284
Number of successful extensions: 1096
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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