Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00924
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY830839-1|AAW52510.1| 2434|Homo sapiens serine/threonine protei...    33   0.81 
AB002301-1|BAA20762.1| 2137|Homo sapiens KIAA0303 protein.             33   0.81 
AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.     30   7.5  
AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.     30   7.5  
AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.     30   7.5  
AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.     30   7.5  
AK075536-1|BAC11679.1|  529|Homo sapiens protein ( Homo sapiens ...    30   7.5  
AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain p...    30   7.5  
AB208887-1|BAD92124.1| 1379|Homo sapiens laminin, gamma 3 precur...    30   7.5  

>AY830839-1|AAW52510.1| 2434|Homo sapiens serine/threonine protein
            kinase protein.
          Length = 2434

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -2

Query: 392  LSGSRFRSGGRFCEALLLLGPVLATPPGLSPESSPTRPVTLTSQ--GDSLGGKKI 234
            L G R+RSG R     + L P+  TP   SP   PT P    S   G SLG  KI
Sbjct: 1169 LGGQRYRSGRRKSAGNIPLSPLARTP---SPTPQPTSPQRSPSPLLGHSLGNSKI 1220


>AB002301-1|BAA20762.1| 2137|Homo sapiens KIAA0303 protein.
          Length = 2137

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -2

Query: 392  LSGSRFRSGGRFCEALLLLGPVLATPPGLSPESSPTRPVTLTSQ--GDSLGGKKI 234
            L G R+RSG R     + L P+  TP   SP   PT P    S   G SLG  KI
Sbjct: 872  LGGQRYRSGRRKSAGNIPLSPLARTP---SPTPQPTSPQRSPSPLLGHSLGNSKI 923


>AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.
          Length = 1575

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 472 GEDCDRCLRYLKDR*WIRTVDE 537
           G DC+RCL + +DR W R   E
Sbjct: 298 GTDCERCLPFFQDRPWARGTAE 319


>AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.
          Length = 1587

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 472 GEDCDRCLRYLKDR*WIRTVDE 537
           G DC+RCL + +DR W R   E
Sbjct: 298 GTDCERCLPFFQDRPWARGTAE 319


>AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.
          Length = 1587

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 472 GEDCDRCLRYLKDR*WIRTVDE 537
           G DC+RCL + +DR W R   E
Sbjct: 298 GTDCERCLPFFQDRPWARGTAE 319


>AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.
          Length = 1619

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 472 GEDCDRCLRYLKDR*WIRTVDE 537
           G DC+RCL + +DR W R   E
Sbjct: 342 GTDCERCLPFFQDRPWARGTAE 363


>AK075536-1|BAC11679.1|  529|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0236 fis, clone HEMBA1007104, highly similar to
           Laminin gamma-3 chain precursor. ).
          Length = 529

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 472 GEDCDRCLRYLKDR*WIRTVDE 537
           G DC+RCL + +DR W R   E
Sbjct: 298 GTDCERCLPFFQDRPWARGTAE 319


>AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain
           precursor protein.
          Length = 1587

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 472 GEDCDRCLRYLKDR*WIRTVDE 537
           G DC+RCL + +DR W R   E
Sbjct: 298 GTDCERCLPFFQDRPWARGTAE 319


>AB208887-1|BAD92124.1| 1379|Homo sapiens laminin, gamma 3 precursor
           variant protein.
          Length = 1379

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 472 GEDCDRCLRYLKDR*WIRTVDE 537
           G DC+RCL + +DR W R   E
Sbjct: 102 GTDCERCLPFFQDRPWARGTAE 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,566,595
Number of Sequences: 237096
Number of extensions: 1776918
Number of successful extensions: 7285
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7285
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)