Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00924
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.9  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   9.1  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   9.1  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   9.1  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   9.1  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   9.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 354 AESTTGSETRPTEKIRRETQWD 419
           A  TTG+ T PT ++R+  Q D
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQND 273


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 428 HRHIPL-SFSPDLLSGSRFRSGGRFCEALLLLGPVLATPPGLSPE 297
           HR + L +   D+ + ++    G     +++LG ++ TP  ++PE
Sbjct: 720 HRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIVGTPVHMAPE 764


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 428 HRHIPL-SFSPDLLSGSRFRSGGRFCEALLLLGPVLATPPGLSPE 297
           HR + L +   D+ + ++    G     +++LG ++ TP  ++PE
Sbjct: 758 HRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIVGTPVHMAPE 802


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 3   EKTSTRRERFHVSESSTLRVCFHKTLSTNLTNRMKRE*Y 119
           E++  R+ER    E   +    +KT+  N  N  K + Y
Sbjct: 65  ERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 103


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 3   EKTSTRRERFHVSESSTLRVCFHKTLSTNLTNRMKRE*Y 119
           E++  R+ER    E   +    +KT+  N  N  K + Y
Sbjct: 65  ERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 103


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 3   EKTSTRRERFHVSESSTLRVCFHKTLSTNLTNRMKRE*Y 119
           E++  R+ER    E   +    +KT+  N  N  K + Y
Sbjct: 65  ERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 103


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 3   EKTSTRRERFHVSESSTLRVCFHKTLSTNLTNRMKRE*Y 119
           E++  R+ER    E   +    +KT+  N  N  K + Y
Sbjct: 65  ERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 103


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 3   EKTSTRRERFHVSESSTLRVCFHKTLSTNLTNRMKRE*Y 119
           E++  R+ER    E   +    +KT+  N  N  K + Y
Sbjct: 298 ERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,713
Number of Sequences: 438
Number of extensions: 3557
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)