Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00923
(702 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 109 9e-23
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 105 1e-21
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 104 2e-21
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 99 9e-20
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 99 9e-20
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 93 5e-18
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 93 6e-18
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 89 1e-16
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 89 1e-16
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 87 4e-16
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 87 4e-16
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 85 1e-15
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 81 3e-14
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 81 3e-14
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 78 2e-13
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 75 1e-12
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 67 5e-10
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 66 6e-10
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 59 9e-08
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 58 3e-07
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 55 2e-06
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 47 4e-04
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 46 7e-04
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 44 0.003
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.019
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 42 0.019
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 38 0.18
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 38 0.32
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 37 0.55
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 37 0.55
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.3
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 36 1.3
UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;... 35 1.7
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.2
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 35 2.2
UniRef50_A1VLK2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 34 2.9
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 34 2.9
UniRef50_UPI000155CE06 Cluster: PREDICTED: similar to MAPA prote... 33 5.1
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 5.1
UniRef50_UPI0000DB70F4 Cluster: PREDICTED: similar to scribbler ... 33 5.1
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 33 5.1
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 6.8
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 33 6.8
UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;... 33 6.8
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 6.8
UniRef50_P14653 Cluster: Homeobox protein Hox-B1; n=29; Euteleos... 33 6.8
UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2; ... 33 9.0
UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep... 33 9.0
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 33 9.0
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 109 bits (261), Expect = 9e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 7e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 105 bits (251), Expect = 1e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 70 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 89.0 bits (211), Expect = 1e-16
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +1
Query: 49 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 228
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 229 AGHQTSAES 255
AGHQTSAES
Sbjct: 61 AGHQTSAES 69
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +1
Query: 496 SRASLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
S LVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR R
Sbjct: 151 SEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFR 193
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/92 (33%), Positives = 55/92 (59%)
Frame = +2
Query: 425 LGGSVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRC 604
L ++AA+GVPALVQ++GH+I+ + E P + + ++ + + + +
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 605 TSLSVFVAGKGKMRNRRRIQRKGPLIIFNKDQ 700
F AG+G MR+RRRI R+GPL++++KD+
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDE 218
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 104 bits (250), Expect = 2e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 184 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = +1
Query: 82 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAES
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAES 183
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 99.1 bits (236), Expect = 9e-20
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 43 WGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*G---ASRHGLISLRC 604
++AA+G PAL+ ARGH + +PE+P + + + + S++ A G +
Sbjct: 103 ALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKA 162
Query: 605 TSLSVFVAGKGKMRNRRRIQRKGPLIIFNKDQ 700
+ AGKGK+R RR QR+GPL+I+N D+
Sbjct: 163 KNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDE 194
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 99.1 bits (236), Expect = 9e-20
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 66 WGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = +1
Query: 64 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 243
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 244 SAES 255
SAES
Sbjct: 62 SAES 65
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRH-GLIS--LRC 604
++AA+GVPAL+ ARGH I ++ E+P + ++ + R +++ G + G + +
Sbjct: 126 ALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKV 185
Query: 605 TSLSVFVAGKGKMRNRRRIQRKGPLIIFN 691
AGKGK+R RR QR+GPL++++
Sbjct: 186 KDSRKLRAGKGKLRGRRHRQRRGPLVVYD 214
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 93.5 bits (222), Expect = 5e-18
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 389
WGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 67 WGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 235 HQTSAES 255
++TSAES
Sbjct: 60 YETSAES 66
Score = 39.5 bits (88), Expect = 0.078
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PT--KSRRSTRPNRLSSS*GASRHGLISLRCT 607
S+AA+G+ +LV ARGH I + E+P + +S + T+ + L ++ R
Sbjct: 127 SIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTK-DALKFLISLGLRDEVN-RLI 184
Query: 608 SLSVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
A GKMRNR+ GPLII++ D
Sbjct: 185 KSXKLRARXGKMRNRKYKISNGPLIIYSXD 214
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 93.1 bits (221), Expect = 6e-18
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 66 WGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = +1
Query: 64 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 243
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 244 SAES 255
SA S
Sbjct: 62 SAHS 65
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ VP+LV +RGH I +PE+P + + + + A R
Sbjct: 126 ALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDS 185
Query: 614 SVFVAGKGKMRNRRRIQRKGPLII 685
AG+GKMRNRR + R+GP+++
Sbjct: 186 REIRAGRGKMRNRRYVARRGPMLV 209
Score = 35.1 bits (77), Expect = 1.7
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV D +Q KTK+A+ FL+ + A D+ +V S+ +R
Sbjct: 151 LVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIR 189
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 89.0 bits (211), Expect = 1e-16
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 66 WGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1
Query: 67 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 246
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 247 AES 255
A S
Sbjct: 63 ARS 65
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 88.6 bits (210), Expect = 1e-16
Identities = 37/46 (80%), Positives = 37/46 (80%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 68 WGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWH 113
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 246
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 247 AES 255
AES
Sbjct: 65 AES 67
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLIS--LRCT 607
+VAATG+ LV ARGH I ++P++P + + + + + R G +
Sbjct: 128 AVAATGIVPLVLARGHRISQVPQIPLV--VEDKIESYEKTTDALNFLKRFGAFEDVQKVV 185
Query: 608 SLSVFVAGKGKMRNRRRIQRKGPLIIF 688
S V AG K R ++ RKGPL+++
Sbjct: 186 STKVVRAGISKQRGKKYRVRKGPLVVY 212
Score = 35.1 bits (77), Expect = 1.7
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DK++ KT A+ FL+R A+ D+ KV ++ +R
Sbjct: 153 LVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVR 191
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 87.0 bits (206), Expect = 4e-16
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 62 WGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = +1
Query: 127 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
+P VF + IR D+V VH +M KN RQ Y VS AG TSA S
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVS 61
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 416 ESGLGGSVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLIS 595
+S + ++A++ + +++ +RG+ ++ IPE+P++ + + L + G+ S
Sbjct: 116 KSAIFSAIASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEKIPKTRDLIKI--LTTLGINS 173
Query: 596 LRCTSLS-VFVAGKGKMRNRRRIQRKGPLIIFNKD 697
+ L +GKGKMRNRR + GPL++F +
Sbjct: 174 IVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVFKNN 208
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 87.0 bits (206), Expect = 4e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 66 WGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +1
Query: 61 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 240
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 241 TSAES 255
TSA S
Sbjct: 61 TSARS 65
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 425 LGGSVAATGVPALVQARGHIIEKIPELP 508
L SVAAT LV +RGH +E +PELP
Sbjct: 123 LAVSVAATASVPLVMSRGHRVESVPELP 150
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 85.4 bits (202), Expect = 1e-15
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 68 WGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 235 HQTSAES 255
HQ SAES
Sbjct: 61 HQHSAES 67
Score = 59.3 bits (137), Expect = 9e-08
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 425 LGGSVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLIS--L 598
+ ++AATG P+LV ARGH I +PELP + + + + + GL
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMK 184
Query: 599 RCTSLSVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
R S GKGKMRNRRR+ GPL+++ +D
Sbjct: 185 RIESSIAIRCGKGKMRNRRRVCAVGPLVVYAED 217
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 81.0 bits (191), Expect = 3e-14
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 389
WGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +1
Query: 76 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Score = 39.9 bits (89), Expect = 0.059
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
+VAA+ +LV+ARGH I + LP + + R + + + + L+
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPII-VSDDIAKARKTKDAVEILRNLNMTEELKRVEK 182
Query: 614 SVFV-AGKGKMRNRRRIQRKGPLII 685
S V GKGKMRNRR QRKG LI+
Sbjct: 183 SRGVRCGKGKMRNRRYTQRKGILIV 207
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 80.6 bits (190), Expect = 3e-14
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 67 WGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +1
Query: 73 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 252
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 253 S 255
S
Sbjct: 66 S 66
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/89 (30%), Positives = 43/89 (48%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ P+LV ARGH I+ +PELP + + + A +
Sbjct: 127 AIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAES 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKDQ 700
G GK RNRR QR+G LI+ ++++
Sbjct: 187 KRIRVGSGKARNRRYTQRRGVLIVHDQNE 215
Score = 37.5 bits (83), Expect = 0.32
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV+D V++I KTK+AV L LKA D+ +S+R+R
Sbjct: 152 LVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIR 190
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = +1
Query: 496 SRASLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
S LVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLR
Sbjct: 13 SEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLR 55
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = +2
Query: 473 RGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSLSVFVAGKGKMRNR 652
RG++++ + E+P + K + + + + L+ AGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 653 RRIQRKGPLIIFNKDQ 700
RR+ RKGPLII+NKDQ
Sbjct: 65 RRLHRKGPLIIYNKDQ 80
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 389
WGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 67 WGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 53.2 bits (122), Expect = 6e-06
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 437 VAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLIS-LRCTSL 613
+AA+ VPALV ARGH I +P++P + +KS + + + + L+ +
Sbjct: 128 IAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIAS 187
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AG+GKMR R+ +RKGPL+++ D
Sbjct: 188 KTVRAGQGKMRGRKIKERKGPLVVYGND 215
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +1
Query: 64 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 243
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 244 SAES 255
SA S
Sbjct: 63 SAIS 66
Score = 38.7 bits (86), Expect = 0.14
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 508 LVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV K + I KTKQAV L+++ A+SD+LKV S+ +R
Sbjct: 152 LVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVR 191
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 66.9 bits (156), Expect = 5e-10
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 68 WGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 66.5 bits (155), Expect = 6e-10
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 389
WGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 64 WGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 47.6 bits (108), Expect = 3e-04
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +2
Query: 392 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRP-NRLSSS* 568
PSRQ A + ++AAT V LVQARGH++ ++ E+P + + R + +
Sbjct: 113 PSRQRKFA---IASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLK 169
Query: 569 GASRHGLISLRCTSLSVFVAGKGKMRNRRRIQRKGPLIIFNKDQ 700
+G + R SV + KGK R +KGPL+I+N+D+
Sbjct: 170 KVGVYGDVQ-RVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDK 212
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/65 (33%), Positives = 42/65 (64%)
Frame = +1
Query: 61 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 240
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 241 TSAES 255
SA S
Sbjct: 59 VSAIS 63
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 59.3 bits (137), Expect = 9e-08
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKS---RRSTRPNRLSSS*GASRHGLISLRC 604
++AA+ VP+L+ ARGH +E +PE+P + + +++ + L GA + I
Sbjct: 130 AIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGA--YADIEKVK 187
Query: 605 TSLSVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
S +V +GKGKMRNRR +QR+GPL+++++D
Sbjct: 188 ASRNVR-SGKGKMRNRRYVQRRGPLVVYSED 217
Score = 35.9 bits (79), Expect = 0.96
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 112 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 198
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 57.6 bits (133), Expect = 3e-07
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 425 LGGSVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPN-RLSSS*GASRHGLISLR 601
+ ++AA+ ALV+ARGH I +P +P + T + T+ + + G R R
Sbjct: 114 VASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKTKDALAIIKAVGVLRD---VER 170
Query: 602 CTSLSVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
C AG+GKMRNRR I RKGPL+I+N +
Sbjct: 171 CKDSRHIRAGRGKMRNRRYITRKGPLVIYNTE 202
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/62 (43%), Positives = 34/62 (54%)
Frame = +1
Query: 70 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 249
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 250 ES 255
S
Sbjct: 61 HS 62
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 389
WG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 63 WGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRGW*G*NAQPSSYPA*GTP 678
LVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+R G P + A G P
Sbjct: 15 LVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNPLASSA-GDP 70
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +1
Query: 523 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
KV+ KTK+ V+ L++LKAW+DI KVY SQR+R
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMR 131
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1
Query: 160 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
D+VN VH ++ KN QPY VS+ AG+QTSAES
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAES 56
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 626 AGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRR IQR+G II+N+D
Sbjct: 132 AGKGKMRNRRPIQRRGSCIIYNED 155
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGG 305
WGTGRA +PRVRGGG
Sbjct: 57 WGTGRARGPMPRVRGGG 73
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +2
Query: 470 ARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSLSVFVAGKGKMRN 649
ARGH IE +PELP + + + + L + + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 650 RRRIQRKGPLIIFNKD 697
RR I RKGPLI++ +
Sbjct: 62 RRYISRKGPLIVYGME 77
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/94 (28%), Positives = 46/94 (48%)
Frame = +2
Query: 419 SGLGGSVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISL 598
+ L ++AAT P V+ RGH+I+ +P LP + + + + + +
Sbjct: 116 AALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVE 175
Query: 599 RCTSLSVFVAGKGKMRNRRRIQRKGPLIIFNKDQ 700
R S AGKGK R RR ++ K LI+ ++D+
Sbjct: 176 RAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDE 209
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +1
Query: 70 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 249
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 250 ES 255
ES
Sbjct: 59 ES 60
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.019
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2
Query: 302 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 406
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 41.5 bits (93), Expect = 0.019
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AAT + V ARGH++EK+P LP + + + R A R
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEG 203
Query: 614 SVFVAGKGKMRNRRRIQRKGPLII 685
AGKGKMR RR + K L++
Sbjct: 204 VKIRAGKGKMRGRRYKEPKSVLVV 227
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 222 QGGWSPNQC*IWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
+G + C +G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 38.3 bits (85), Expect = 0.18
Identities = 31/86 (36%), Positives = 43/86 (50%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AAT LV+ARGHII+K + + R++ +L G + L
Sbjct: 131 ALAATKELDLVKARGHIIDKPVPIVVDGLEQLRKTKEIQQLLLKLGLEKE----LERVYE 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFN 691
AGKGK R R I+RKGPLI+ N
Sbjct: 187 IKRRAGKGKRRGRAYIERKGPLIVVN 212
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 37.5 bits (83), Expect = 0.32
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 127 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
LP +F P+R DL+ V ++ +S QP AG +TSAES
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAES 67
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 36.7 bits (81), Expect = 0.55
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 76 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Score = 35.9 bits (79), Expect = 0.96
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSR--RSTRPNRLSSS*GASRHGLISLRCT 607
++AAT LV+ RGH + ++ ++P++ + ++T+ R ++ R
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIV--RAK 174
Query: 608 SLSVFVAGKGKMRNRRRIQRKGPLIIFNKDQ 700
+GKGK+R R+ KGPL++ D+
Sbjct: 175 KGRKIKSGKGKLRGRKYRTPKGPLVVVGNDR 205
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 36.7 bits (81), Expect = 0.55
Identities = 27/91 (29%), Positives = 42/91 (46%)
Frame = +2
Query: 425 LGGSVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRC 604
L ++AAT LV+ R H+ E ELP + + R ++ A R
Sbjct: 113 LKSAIAATANEELVRQRSHVFEG--ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERA 170
Query: 605 TSLSVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
+ AG+GKMR RR +++K L++ KD
Sbjct: 171 KERKRYRAGRGKMRGRRYVKKKSVLLVVGKD 201
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 276 ARIPRVRGGGTHRSGQGAFGNMCRGG 353
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 514 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
V DK++ KTK A+ FL+R A+ D+ KV ++ +R
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIR 37
>UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 468
Score = 35.1 bits (77), Expect = 1.7
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = -1
Query: 450 PVAATLPPRPLSXXXXXXXXXXXXXASWGRTYVHHDTCYRRHPDRTYEYHHHG-HAEFGR 274
P+A +PP PL + R HH + HP + HHH ++ GR
Sbjct: 356 PIAFAVPPPPLHTSTTTKHNSWHSGVATSR---HHQ---QYHPPHHQQQHHHNKNSSQGR 409
Query: 273 QHVQYP-RFSTGLVTSLLAHAVGLPRVLGHRN 181
H P R G TS + G PR + H N
Sbjct: 410 HHNNIPFRSHQGRNTSYNSSNYGKPRFIPHMN 441
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 348 HDTCYRRHPDRTYEYHHHGHAEFGRQH 268
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 261 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 374
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_A1VLK2 Cluster: Putative uncharacterized protein; n=1;
Polaromonas naphthalenivorans CJ2|Rep: Putative
uncharacterized protein - Polaromonas naphthalenivorans
(strain CJ2)
Length = 233
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -1
Query: 333 RRHPDRTYEYHHHGHAEFGRQHVQYPRFSTGLVTSLLAHAVGLPRVLGHRNVNII 169
R HP H HG G H+Q R G++ LAH +G+P HR++ ++
Sbjct: 62 RLHP-LLQHLHLHGGVLVGDVHIQVGRGLAGVLGRRLAHKMGIPIDQPHRHLRVV 115
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 127 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
LP VF+ P+R DL+ + N +Q Y + AG +T AES
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAES 60
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 258 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 374
G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 75 GVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_UPI000155CE06 Cluster: PREDICTED: similar to MAPA protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
MAPA protein - Ornithorhynchus anatinus
Length = 712
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 492 RFPSFPGCSRQSPGDQQDQTGCHLPEAPQGMV 587
R+ S G SPGD++D+TG PEAP+G V
Sbjct: 613 RWKSTSGPRDGSPGDREDRTGDREPEAPRGDV 644
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -1
Query: 351 HHDTCYRRHPDRTYEY----HHHGHAEFGRQHVQYPRFSTGLVTSL 226
HHD + RH + + HHHGH GR H + ST +S+
Sbjct: 140 HHDRHHGRHHHGRHHHGHRPHHHGHRHHGRHHHHHHHHSTTTQSSV 185
>UniRef50_UPI0000DB70F4 Cluster: PREDICTED: similar to scribbler
CG5580-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to scribbler CG5580-PA, isoform A -
Apis mellifera
Length = 1927
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -1
Query: 351 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPRFSTGLVTSLLAHAVGLPRVLG 190
HH + HP + +HHH H +Q +Q + GL +S L P G
Sbjct: 178 HHPHHHHPHPHHHHHHHHHHHHHHHQQQLQNSSTTNGLNSSNLIAVTTSPNGCG 231
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +2
Query: 263 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 427
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 428 GGSVAATGVPA 460
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 333 RRHPDRTYEYHHHGHAEFGRQHVQ-YP 256
R PD + +HHHGH G HV+ YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 33.1 bits (72), Expect = 6.8
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 216 REQGGWSPNQC*IWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 383
R QGG P + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 539
Score = 33.1 bits (72), Expect = 6.8
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 359 VRPHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP 499
+RP + ALAP+ +PP S G A G P L+ A G +++ +P
Sbjct: 151 LRPSSRIRALAPAPRPPLLPSAQG---APHGQPTLICAPGSLLQPLP 194
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 33.1 bits (72), Expect = 6.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 136 RTGGA-WLHPAPSHSSLSTPTLKVGLPIDSFRYFSEAIPPN 17
R GG WLH A SH P +++GLP+ E +PP+
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPPD 203
>UniRef50_P14653 Cluster: Homeobox protein Hox-B1; n=29;
Euteleostomi|Rep: Homeobox protein Hox-B1 - Homo sapiens
(Human)
Length = 301
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 498 PSFPGCSRQSPGDQQDQTGCHLPEAPQGMV 587
P+ PGC +++ GD DQ+ C PEA V
Sbjct: 270 PAPPGCPKEAAGDASDQSTCTSPEASPSSV 299
>UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 449
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 392 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP 499
P+ P + +GG A GVPAL+ G +I +P
Sbjct: 114 PAMSAPDVGTAIGGLAALPGVPALISGLGSLIPSVP 149
>UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep:
AsmA precursor - Delftia acidovorans SPH-1
Length = 791
Score = 32.7 bits (71), Expect = 9.0
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +2
Query: 263 WTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSVA 442
WT RP S P W + + V W VR A L QPP+ + G V
Sbjct: 275 WTFKRPESTGPRWRFQVAQLSLRGGLVGWSDGVRQMAVRARLDSLVQPPSPDFPYGMRVG 334
Query: 443 ATG--VPALVQARGHI 484
TG A V+A+G I
Sbjct: 335 LTGRIAKATVEAQGLI 350
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 9.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 363 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 271
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 385 VGTVASTSDSGERPWRQRCCYRRPSARS 468
+GT AS G+RPW R C+ R RS
Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRS 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,738,771
Number of Sequences: 1657284
Number of extensions: 14612574
Number of successful extensions: 48372
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 44520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47922
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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