Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00923
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 109 1e-23
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 109 1e-23
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 109 1e-23
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 109 1e-23
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 109 1e-23
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 33 0.75
X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRN... 33 0.99
AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein. 33 0.99
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQT AES
Sbjct: 60 HQTRAES 66
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
Score = 55.2 bits (127), Expect = 2e-07
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE+ PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRR IQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRR-IQRRGPCIIYNED 213
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV +GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 81 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 126
Score = 91.5 bits (217), Expect = 3e-18
Identities = 44/68 (64%), Positives = 54/68 (79%)
Frame = +1
Query: 52 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 231
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 232 GHQTSAES 255
GHQTSAES
Sbjct: 73 GHQTSAES 80
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 141 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 200
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 201 QRMRAGKGKMRNRRRIQRRGPCIIYNED 228
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 166 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 204
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (261), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 91.1 bits (216), Expect = 4e-18
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAES 255
HQTSAES
Sbjct: 60 HQTSAES 66
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +2
Query: 434 SVAATGVPALVQARGHIIEKIPELPWL*PTKSRRSTRPNRLSSS*GASRHGLISLRCTSL 613
++AA+ +PALV ++GH IE++PELP + K + + + +
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 614 SVFVAGKGKMRNRRRIQRKGPLIIFNKD 697
AGKGKMRNRRRIQR+GP II+N+D
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNED 214
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 508 LVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 624
LVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+R
Sbjct: 152 LVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMR 190
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 33.5 bits (73), Expect = 0.75
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +2
Query: 263 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 427
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 428 GGSVAATGVPA 460
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRNA
from the Hox2 locus. ).
Length = 301
Score = 33.1 bits (72), Expect = 0.99
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 498 PSFPGCSRQSPGDQQDQTGCHLPEAPQGMV 587
P+ PGC +++ GD DQ+ C PEA V
Sbjct: 270 PAPPGCPKEAAGDASDQSTCTSPEASPSSV 299
>AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein.
Length = 108
Score = 33.1 bits (72), Expect = 0.99
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 498 PSFPGCSRQSPGDQQDQTGCHLPEAPQGMV 587
P+ PGC +++ GD DQ+ C PEA V
Sbjct: 77 PAPPGCPKEAAGDASDQSTCTSPEASPSSV 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,301,652
Number of Sequences: 237096
Number of extensions: 2265548
Number of successful extensions: 6689
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6650
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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