Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00923
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   8.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   8.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.6  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   RY*CIFGGIASLK*RNESIGSP 68
           RY C+FG   +L  R E+ G P
Sbjct: 530 RY-CLFGNTVNLTSRTETTGEP 550


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   RY*CIFGGIASLK*RNESIGSP 68
           RY C+FG   +L  R E+ G P
Sbjct: 530 RY-CLFGNTVNLTSRTETTGEP 550


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 306 YHHHGHAEFGRQHVQY 259
           +HHH H     QH+ Y
Sbjct: 351 HHHHHHQTQSLQHLHY 366


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 318 GQGAFGNMCRGGRMFAP 368
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 519 GYNQGSSGIFSIMCPLA*TS 460
           GY  GS G F  + P+A TS
Sbjct: 383 GYPIGSGGSFPSLYPMATTS 402


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 303 HHHGHAEFGRQHVQYPRF 250
           HH+G A   +Q + YPRF
Sbjct: 64  HHYGAAG-SQQDMPYPRF 80


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 288 AEFGRQHVQYPRFSTGLVTSLLAHAVGLPRVL 193
           ++FG  +VQY      L T  LA AV    VL
Sbjct: 284 SQFGENNVQYQGSEDILNTQSLAKAVSKNGVL 315


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,898
Number of Sequences: 438
Number of extensions: 3737
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)