Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00919
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069648-1|AAL39793.1|  238|Drosophila melanogaster LD41421p pro...    31   2.1  
AE014298-1660|AAF48075.1|  201|Drosophila melanogaster CG2371-PC...    31   2.1  
AE014298-1659|AAF48074.1|  201|Drosophila melanogaster CG2371-PA...    31   2.1  
AE014298-1658|AAF48073.1|  238|Drosophila melanogaster CG2371-PB...    31   2.1  
AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB...    29   8.6  

>AY069648-1|AAL39793.1|  238|Drosophila melanogaster LD41421p
           protein.
          Length = 238

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 344 FIFVPLTLRTDLKS-LGLCDE-KADVIVKVWSSETRPILDQFSKE 472
           FI  P  L+ +L+  L L DE K D I+++W  ET PI++  + +
Sbjct: 111 FIIKPSLLQRELREKLQLEDEAKIDAILRLWVRETTPIMNNLASK 155



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 102 MSANWIRITPGLTKGIHLINLLELSRFEQFL 194
           MS NWI+IT    +GI +IN L    F   L
Sbjct: 1   MSINWIKITERAREGIKIINALPYETFTTVL 31


>AE014298-1660|AAF48075.1|  201|Drosophila melanogaster CG2371-PC,
           isoform C protein.
          Length = 201

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 344 FIFVPLTLRTDLKS-LGLCDE-KADVIVKVWSSETRPILDQFSKE 472
           FI  P  L+ +L+  L L DE K D I+++W  ET PI++  + +
Sbjct: 74  FIIKPSLLQRELREKLQLEDEAKIDAILRLWVRETTPIMNNLASK 118


>AE014298-1659|AAF48074.1|  201|Drosophila melanogaster CG2371-PA,
           isoform A protein.
          Length = 201

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 344 FIFVPLTLRTDLKS-LGLCDE-KADVIVKVWSSETRPILDQFSKE 472
           FI  P  L+ +L+  L L DE K D I+++W  ET PI++  + +
Sbjct: 74  FIIKPSLLQRELREKLQLEDEAKIDAILRLWVRETTPIMNNLASK 118


>AE014298-1658|AAF48073.1|  238|Drosophila melanogaster CG2371-PB,
           isoform B protein.
          Length = 238

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 344 FIFVPLTLRTDLKS-LGLCDE-KADVIVKVWSSETRPILDQFSKE 472
           FI  P  L+ +L+  L L DE K D I+++W  ET PI++  + +
Sbjct: 111 FIIKPSLLQRELREKLQLEDEAKIDAILRLWVRETTPIMNNLASK 155



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 102 MSANWIRITPGLTKGIHLINLLELSRFEQFL 194
           MS NWI+IT    +GI +IN L    F   L
Sbjct: 1   MSINWIKITERAREGIKIINALPYETFTTVL 31


>AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB,
           isoform B protein.
          Length = 2048

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 10/57 (17%)
 Frame = +3

Query: 150 HLINLLELSR--FEQFLNRILVKL--------KMNNNEVFSQEEQKSSQNCLKSTKK 290
           +LINLLE  +   E  L+++L++         K++NN   + +E KS QNCL+  ++
Sbjct: 688 NLINLLEKQKSDLEYDLDKLLLEKCDLQEKHEKLSNNSCSTSDELKSVQNCLQEAQE 744


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,369,642
Number of Sequences: 53049
Number of extensions: 475650
Number of successful extensions: 962
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)