Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00918
         (732 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6HCS2 Cluster: Putative uncharacterized protein; n=5; ...    33   5.5  
UniRef50_Q6L432 Cluster: Disease resistance protein, putative; n...    33   9.5  

>UniRef50_Q6HCS2 Cluster: Putative uncharacterized protein; n=5;
           Bacillus cereus group|Rep: Putative uncharacterized
           protein - Bacillus thuringiensis subsp. konkukian
          Length = 313

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +1

Query: 253 CKFNTVRRISDLTKLHPSTNLTPIVNLVTKKNRFVLCQLFEGKILEEQGTASI 411
           CK   + R+++++ LH   N T I    + KN+FV+ Q  EG+ + EQ  A I
Sbjct: 10  CKQYNLNRLTEVSLLHGGENQTYIFE--SDKNKFVVRQYREGRYIAEQIEAEI 60


>UniRef50_Q6L432 Cluster: Disease resistance protein, putative; n=5;
            Solanaceae|Rep: Disease resistance protein, putative -
            Solanum demissum (Wild potato)
          Length = 2544

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +1

Query: 256  KFNTVRRISDLTKLHPSTNLTPIVNLVTK-KNRFVLCQLFEGKILEE-QGTASIAPPTTS 429
            K N V   S LTKL   T++ P+ NL+   K   +  + F    LE+ QG   I  P   
Sbjct: 915  KLNCVMAESSLTKLRKHTDMDPLKNLIVNVKEELIFLRTFFMDSLEQCQGETKITLPFPL 974

Query: 430  RVLLERTR 453
            +V L   +
Sbjct: 975  QVKLNHVK 982


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,542,505
Number of Sequences: 1657284
Number of extensions: 13854707
Number of successful extensions: 35048
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35039
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)