Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00918
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.83 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.9  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 382 ILEEQGTASIAPPTTSRVLLERTRHGLVTSHKTIYNAFTKLRYRIIEKRF 531
           + E+   +   PPT S    ER       S K I  AFT  +   +E+ F
Sbjct: 87  LAEKVSVSPTTPPTPSPPPEERLTPSKDASSKRIXTAFTSTQLLELEREF 136


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
 Frame = +2

Query: 347 IDLFSVNYSREKYWKNKARHQLLLRPHPESF*NEP-----GTVWSLH 472
           +DLF      ++ W+N  RH L            P     G+ WSLH
Sbjct: 171 MDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWSLH 217


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = -2

Query: 98  LSIILRCMMATHHSPNEKLTICCENLQSSQD 6
           ++I++R   + +   N+KL   CE  +S ++
Sbjct: 189 INILIRSFKSRYKDLNQKLETACEQSKSVEE 219


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 238 VGIYDKGKIFHRAGD 194
           V +  KG+IFH  GD
Sbjct: 365 VNMLPKGEIFHMGGD 379


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +2

Query: 452 GTVWSLHIRLYIMHLLNYDI 511
           GT W +++R+Y   +  ++I
Sbjct: 56  GTCWIIYVRIYCKEIRFFEI 75


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 616 LCISQVTNRVHFVFTVSRYVF 678
           +C+S V + VHF + V+   F
Sbjct: 101 ICVSNVFDFVHFYYPVATMSF 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,866
Number of Sequences: 336
Number of extensions: 3721
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)