Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00918
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4 p...    31   4.3  
AY650033-1|AAV66579.1|  979|Homo sapiens HECT and RCC1 containin...    31   4.3  
AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containin...    31   4.3  
AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4 p...    31   4.3  
AL356741-1|CAH74146.1|  907|Homo sapiens hect domain and RLD 4 p...    31   4.3  
AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4 p...    31   4.3  
AL133551-1|CAI16031.1|  907|Homo sapiens hect domain and RLD 4 p...    31   4.3  
AB046813-1|BAB13419.1|  953|Homo sapiens KIAA1593 protein protein.     31   4.3  

>BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4
           protein.
          Length = 1049

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 509 YRNLVNALYIVLCEVTRPCLVRSRRTRDVVGGAIDAVPCSSNI 381
           +R  V++L++ + E   PCL+   R  ++VG A++ +  + NI
Sbjct: 682 HRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNI 724


>AY650033-1|AAV66579.1|  979|Homo sapiens HECT and RCC1 containing
           protein 4 isoform 3 protein.
          Length = 979

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 509 YRNLVNALYIVLCEVTRPCLVRSRRTRDVVGGAIDAVPCSSNI 381
           +R  V++L++ + E   PCL+   R  ++VG A++ +  + NI
Sbjct: 690 HRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNI 732


>AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containing
           protein 4 isoform 1 protein.
          Length = 1057

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 509 YRNLVNALYIVLCEVTRPCLVRSRRTRDVVGGAIDAVPCSSNI 381
           +R  V++L++ + E   PCL+   R  ++VG A++ +  + NI
Sbjct: 690 HRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNI 732


>AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4
           protein.
          Length = 1049

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 509 YRNLVNALYIVLCEVTRPCLVRSRRTRDVVGGAIDAVPCSSNI 381
           +R  V++L++ + E   PCL+   R  ++VG A++ +  + NI
Sbjct: 682 HRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNI 724


>AL356741-1|CAH74146.1|  907|Homo sapiens hect domain and RLD 4
           protein.
          Length = 907

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 509 YRNLVNALYIVLCEVTRPCLVRSRRTRDVVGGAIDAVPCSSNI 381
           +R  V++L++ + E   PCL+   R  ++VG A++ +  + NI
Sbjct: 540 HRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNI 582


>AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4
           protein.
          Length = 1049

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 509 YRNLVNALYIVLCEVTRPCLVRSRRTRDVVGGAIDAVPCSSNI 381
           +R  V++L++ + E   PCL+   R  ++VG A++ +  + NI
Sbjct: 682 HRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNI 724


>AL133551-1|CAI16031.1|  907|Homo sapiens hect domain and RLD 4
           protein.
          Length = 907

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 509 YRNLVNALYIVLCEVTRPCLVRSRRTRDVVGGAIDAVPCSSNI 381
           +R  V++L++ + E   PCL+   R  ++VG A++ +  + NI
Sbjct: 540 HRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNI 582


>AB046813-1|BAB13419.1|  953|Homo sapiens KIAA1593 protein protein.
          Length = 953

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 509 YRNLVNALYIVLCEVTRPCLVRSRRTRDVVGGAIDAVPCSSNI 381
           +R  V++L++ + E   PCL+   R  ++VG A++ +  + NI
Sbjct: 586 HRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNI 628


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,258,205
Number of Sequences: 237096
Number of extensions: 2066641
Number of successful extensions: 3455
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3455
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)