Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00917
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    28   0.24 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   1.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   2.3  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   5.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.0  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 604 CLNGGVCFTVVISESPIYNCECQSGYVGPRC 696
           C N G C  +  +   +   EC  GY GPRC
Sbjct: 778 CPNNGACMQM--AGDTVICLECPVGYFGPRC 806


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 661 CECQSGYVGPRC 696
           CEC+ G+ GP C
Sbjct: 616 CECREGWTGPAC 627


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -3

Query: 233  YIDDHSLMTEARFLRAPEISHRSLDEHVESEKSNTPSNFVNCVWRSFK 90
            YI  H  + EA    + E+  RSL  H++      P   +  +   FK
Sbjct: 921  YIFIHDALLEAVICGSTEVPARSLHNHIQKLMQTEPHENITGMEMEFK 968


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 261 ADRQRRCEQRIPVRNSNAVMSSPFGFLISHRP 356
           A R R       V++S  V  +PF +L+ H P
Sbjct: 366 AYRNRSAFDAQQVQDSKLVFDTPFLYLVRHNP 397


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 37  SQLHFVYNFSNGTLSVCVLNDRHTQFTKFEGVFDFSLSTCSSRD 168
           S + FV+    G  SV ++NDR+T  T F    D  ++    +D
Sbjct: 85  SGIIFVWIKYEGRWSVELINDRNTPVTHFSWSHDGRMALICYQD 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,488
Number of Sequences: 2352
Number of extensions: 12239
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)