Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00914
         (719 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0801 + 21349434-21349438,21349952-21349978,21351175-213512...    43   3e-04
06_01_0903 - 6939672-6939782,6940051-6940110,6940221-6940322,694...    39   0.003
07_03_1373 - 26110436-26110584,26110585-26110752,26110829-261108...    33   0.23 
08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,602...    30   1.6  

>08_02_0801 +
           21349434-21349438,21349952-21349978,21351175-21351249,
           21351333-21351369,21351469-21351552,21351821-21351881,
           21351961-21352067,21352162-21352227,21352366-21352461
          Length = 185

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +3

Query: 255 LASYDADGAWPVMLDEFVEWLRANDS 332
           L +YD+D AWP++LD FVEWLR N S
Sbjct: 160 LDNYDSDLAWPLILDNFVEWLRENKS 185


>06_01_0903 -
           6939672-6939782,6940051-6940110,6940221-6940322,
           6940464-6940513,6940686-6940750,6940849-6940931,
           6941117-6941140,6941798-6941856,6942041-6942174,
           6942823-6942884,6942908-6942976
          Length = 272

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +3

Query: 255 LASYDADGAWPVMLDEFVEWLRAN 326
           L++YD +GAWP ++DEFVE+L  N
Sbjct: 242 LSNYDEEGAWPYLIDEFVEYLTEN 265



 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +2

Query: 8   LRNLLNDPHIFKAIYRYSYDFARDKEQRSLDTEVAGALLGVLLP--RWALRAALCEFI 175
           LR  + D H F+ IY +++ +AR+K Q+SL  E A  +  +L     W L    C+F+
Sbjct: 158 LRAEIKDDHKFREIYNFAFAWAREKGQKSLALETALGMWQLLFAERHWPLIDHWCQFL 215


>07_03_1373 -
           26110436-26110584,26110585-26110752,26110829-26110896,
           26111755-26111800,26111929-26112025,26112802-26112884,
           26112987-26113062,26113147-26113195,26113517-26113601,
           26114247-26114331
          Length = 301

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +3

Query: 255 LASYDADGAWPVMLDEFVE 311
           L  YD  GAWPV++D+FVE
Sbjct: 152 LEGYDPKGAWPVLVDDFVE 170


>08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,
            6027187-6027258,6027354-6027425,6027784-6027855,
            6027980-6028051,6028134-6028205,6028483-6028554,
            6028791-6028865,6028970-6029041,6029134-6029199,
            6029267-6029332,6029409-6029453,6029542-6029606,
            6029697-6030076,6030455-6030653,6030725-6030883,
            6030966-6031084,6031156-6031200,6031226-6031791,
            6031871-6032021,6032117-6032454,6033702-6033765,
            6034329-6034370,6035572-6035575,6035853-6036039,
            6037252-6037323,6037687-6037758,6037867-6037938,
            6038019-6038090,6038651-6038725,6038815-6038886,
            6038988-6039053,6039163-6039228,6039348-6039392,
            6039469-6039533,6039615-6039994,6040070-6040202,
            6040354-6040512,6040599-6040717,6040805-6041015,
            6041155-6041386,6041469-6041619,6041725-6042084
          Length = 1952

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +2

Query: 14   NLLNDPHIFKAIYRYSYDFARDKEQRSLDTEVAGALLGVLLPRWALRAALCE 169
            N+L DP +   I  +      D+++  ++T+VAG   G L P +A+R  L E
Sbjct: 1748 NILLDPDLTPKISDFGLAKLYDEKKTHVNTKVAGT-FGYLAPEYAMRGHLTE 1798


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,936,176
Number of Sequences: 37544
Number of extensions: 266630
Number of successful extensions: 703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)