Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00913
(722 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 153 2e-38
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 136 4e-33
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 130 2e-31
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 119 5e-28
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 109 4e-25
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 93 4e-20
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 82 9e-17
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 56 4e-09
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 35 0.010
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 2.1
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 2.1
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 2.7
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 3.6
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.6
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.7
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 6.3
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.3
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 26 6.3
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 8.3
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 153 bits (372), Expect = 2e-38
Identities = 70/101 (69%), Positives = 80/101 (79%)
Frame = +2
Query: 218 GLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 397
G F PQF +QGGDFT NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
Query: 398 SQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLG 520
SQFFITTV T WLDG+HVVFG V EGM+VVK++E+ G++ G
Sbjct: 108 SQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSG 148
Score = 88.2 bits (209), Expect = 1e-18
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = +3
Query: 90 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEG 266
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FM + G
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGG 63
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 136 bits (328), Expect = 4e-33
Identities = 61/94 (64%), Positives = 72/94 (76%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 394
+G F P F +QGGD T +GTGGKSIYG++F DENF L H PG+LSMANAG D+N
Sbjct: 72 EGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSN 131
Query: 395 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 496
GSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 132 GSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Score = 85.0 bits (201), Expect = 1e-17
Identities = 40/69 (57%), Positives = 46/69 (66%)
Frame = +3
Query: 60 NTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRV 239
N G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRV
Sbjct: 20 NRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRV 79
Query: 240 IPNFMCKEG 266
IPNFM + G
Sbjct: 80 IPNFMIQGG 88
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 130 bits (314), Expect = 2e-31
Identities = 62/98 (63%), Positives = 71/98 (72%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F +QGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG
Sbjct: 49 LTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGP 108
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+TNGSQFFITTV T LDG+HVVFG V++G V+ IE
Sbjct: 109 NTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIE 146
Score = 52.8 bits (121), Expect = 5e-08
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +3
Query: 90 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFMC 257
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFM
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 258 KEG 266
+ G
Sbjct: 66 QGG 68
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 119 bits (286), Expect = 5e-28
Identities = 53/86 (61%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F +QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITTV
Sbjct: 67 FMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVP 126
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIET 502
+LDG+HVVFG V+EG ++VK+IE+
Sbjct: 127 CDFLDGKHVVFGEVIEGYDIVKEIES 152
Score = 68.1 bits (159), Expect = 1e-12
Identities = 34/68 (50%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 242
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 243 PNFMCKEG 266
FM + G
Sbjct: 65 QGFMIQGG 72
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 109 bits (262), Expect = 4e-25
Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Frame = +2
Query: 218 GLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTN 394
G+ F P F +QGGD T G GG SIYG+KF+DE + L HTG G+LSMANAG +TN
Sbjct: 40 GVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTN 98
Query: 395 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 496
SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 99 SSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
Score = 55.2 bits (127), Expect = 9e-09
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F+ +G PT T G
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTL--AKEGY-YDGVIFHRVIPDFVI-QGGDPTGTGRG 63
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 93.1 bits (221), Expect = 4e-20
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F +QGGD +GTGG+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT
Sbjct: 503 FMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDL 561
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIE 499
T WLDG+H +F G++VV +IE
Sbjct: 562 TPWLDGKHTIFARAYAGLDVVHRIE 586
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEG 266
G I I+L + PK +NF E G+ Y +IFHR+I NFM + G
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGG 508
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 81.8 bits (193), Expect = 9e-17
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 245 QFHVQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTV 421
+F +QGGD + G GG+SI+G F+DE LKH G++SMAN G +TNGSQFFI
Sbjct: 323 RFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYG 381
Query: 422 KTSWLDGRHVVFGNVVEGMEVVKQIE 499
LD +H +FG VV G+ V+ +E
Sbjct: 382 PAKHLDNKHTIFGRVVGGLNVLDALE 407
Score = 36.3 bits (80), Expect = 0.004
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM +G P+ T G
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMI-QGGDPSGTGRG 337
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 56.4 bits (130), Expect = 4e-09
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 242 PQFHVQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITT 418
P+F +QGGD T G GG+SIYG F E L+ G++ MA + N SQFFIT
Sbjct: 59 PEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITL 117
Query: 419 VKTSWLDGRHVVFGNVV 469
T +G+ +FG VV
Sbjct: 118 GPTPEWNGKQTLFGRVV 134
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
G I IEL PK C NF LC +G+ Y G+I HRV+P F+ +G PT T +G
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLI-QGGDPTGTGMG 74
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 35.1 bits (77), Expect = 0.010
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 111 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEG 266
+ +G +VI+L PKTCENF LC K Y F+ + N+ C+ G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTG 54
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 561 NLTTVFDNDSLRGLPRLAPKVSICLTTSMPSTTFP 457
N T DN+SL+ +PRL P S+ L +S P P
Sbjct: 370 NNDTTSDNNSLQAVPRLDPVPSLTL-SSTPVAELP 403
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.5 bits (58), Expect = 2.1
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 132 VIELRSDVTPKTCENFRALCTGEKGFGYKG-SIFHRVIPNFMCKEGTSPTITALGESPST 308
++++ +D K E +A T G K SI+H+VI KE I L ++PS
Sbjct: 675 LLQIHADKMLKMSEVEKANWTLPSNLGGKSVSIYHKVIKKVYGKEHAQQIIENLQKNPSV 734
Query: 309 AISL 320
I +
Sbjct: 735 TIPI 738
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 99 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 194
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 258 KEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 365
KE +P+ITA SP +A S + ISP + + +S
Sbjct: 334 KEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 394 WFPVLHHHC 420
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 489 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 340
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 412
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.3
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 507 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 328
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 327 SSSNL 313
SSS++
Sbjct: 222 SSSSI 226
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 25.8 bits (54), Expect = 6.3
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 523 SSQTGAKGLNLLDNFHA--FNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHG 365
S Q+ G NL F A +++ P+ NM P ++ +GT + T SHG
Sbjct: 223 SQQSFRLGNNLTKTFWATGYSDSPEANMYGSHPFYMEQRYIPIGTTNTYTSASHG 277
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 8.3
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = -2
Query: 478 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 317
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 316 LIAVDGLSPS 287
LSPS
Sbjct: 287 KFLHHSLSPS 296
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,187,939
Number of Sequences: 5004
Number of extensions: 70512
Number of successful extensions: 248
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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