Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00913
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 151 5e-37
09_06_0359 + 22508900-22509439 146 2e-35
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 146 2e-35
02_01_0160 + 1116160-1116678 143 1e-34
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 127 1e-29
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 126 2e-29
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 125 3e-29
10_01_0309 + 3417602-3418147 119 2e-27
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 112 2e-25
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 109 3e-24
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 107 9e-24
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 107 9e-24
06_01_0214 + 1634171-1634173,1634263-1634742 91 1e-18
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 84 9e-17
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 80 2e-15
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 73 2e-13
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 70 2e-12
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 67 2e-11
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 66 3e-11
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 60 2e-09
02_01_0086 + 613113-613532 51 1e-06
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 47 2e-05
01_01_0077 - 585670-585787,585921-586687 40 0.002
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 37 0.019
10_01_0310 + 3425099-3425218 37 0.019
08_02_0053 + 11721658-11721689,11721960-11722710 37 0.019
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439... 30 2.1
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 29 2.8
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 29 2.8
07_03_1767 + 29338867-29338912,29339261-29339325,29339571-293396... 29 3.7
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 29 4.9
06_01_0719 + 5239238-5239635,5239735-5239945,5240379-5240454,524... 28 6.5
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 6.5
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 6.5
02_05_0554 + 29929860-29929959,29932944-29934220 28 8.6
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 151 bits (366), Expect = 5e-37
Identities = 70/107 (65%), Positives = 80/107 (74%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F +QGGDFT +G GG+SIYG KF DENF +KHTGPG+LSMANAG
Sbjct: 100 LHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGR 159
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
DTNGSQFFITTV TSWLDG+HVVFG V+ GM+VV +IE G G P
Sbjct: 160 DTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGSP 206
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 242
+V+FDV +D P G++V+ L PKT ENFRALCTGEKG G +KGS FHR+I
Sbjct: 52 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRII 111
Query: 243 PNFMCKEG 266
P+FM + G
Sbjct: 112 PSFMIQGG 119
>09_06_0359 + 22508900-22509439
Length = 179
Score = 146 bits (353), Expect = 2e-35
Identities = 66/105 (62%), Positives = 80/105 (76%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG++F DENF L+HTGPGVLSMANAG
Sbjct: 55 LHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGP 114
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLG 520
+TNGSQFFI T +T+WLDG+HVVFG VV+G VV+++E G+ G
Sbjct: 115 NTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSG 159
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 7/69 (10%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 239
P+VFFD+ + A G++V+EL +D PKT ENFR LCTGEKG G YKGS FHR+
Sbjct: 6 PKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRI 65
Query: 240 IPNFMCKEG 266
IPNFMC+ G
Sbjct: 66 IPNFMCQGG 74
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +1
Query: 514 SGKTSKRIVIKDCGQIA 564
SG T++R++I+DCGQ+A
Sbjct: 158 SGGTAERVLIEDCGQLA 174
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 146 bits (353), Expect = 2e-35
Identities = 69/108 (63%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 394
+G F F +QGGDF NGTGGKSIYG F+DENF L HTGPGV+SMANAG +TN
Sbjct: 131 KGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTN 190
Query: 395 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLG-RPLRE 535
GSQFFI TVKT WLDGRHVVFG V+EGM++VK IE+ G RP ++
Sbjct: 191 GSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKK 238
Score = 79.0 bits (186), Expect = 4e-15
Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Frame = +3
Query: 84 RVFFDVTVDDAP---LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFM 254
+V+FD+++ + +G++VI L D P+T ENFRALCTGEKGFGYKGS FHRVI +FM
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFM 143
Query: 255 CKEG 266
+ G
Sbjct: 144 IQGG 147
>02_01_0160 + 1116160-1116678
Length = 172
Score = 143 bits (346), Expect = 1e-34
Identities = 68/105 (64%), Positives = 76/105 (72%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P+F QGGDFT NGTGG+SIYG KF DE F KH PG+LSMANAG
Sbjct: 53 LHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGP 112
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLG 520
+TNGSQFFI TV SWLDG+HVVFG VVEGM+VVK IE G+ G
Sbjct: 113 NTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGG 157
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/72 (62%), Positives = 51/72 (70%), Gaps = 7/72 (9%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
MS RVFFD+TV AP G+IV+EL + P+T ENFRALCTGEKG G YKGS F
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 231 HRVIPNFMCKEG 266
HRVIP FMC+ G
Sbjct: 61 HRVIPEFMCQGG 72
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 127 bits (306), Expect = 1e-29
Identities = 61/107 (57%), Positives = 73/107 (68%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F +QGGD + NGTG SIYG F DENF + H+ PG+LSMAN
Sbjct: 89 LSYKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAK 148
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
DTNGSQFFITTVK + LDG+HVVFG V+ GM+VV +IE G+ G P
Sbjct: 149 DTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSGTP 195
Score = 78.6 bits (185), Expect = 5e-15
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 242
+VFFD+T++ P G+IV+ L + PKT ENFRA+CTGEKG G YKG+ FHR+I
Sbjct: 41 KVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRII 100
Query: 243 PNFMCKEG 266
P FM + G
Sbjct: 101 PGFMIQGG 108
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 126 bits (304), Expect = 2e-29
Identities = 60/96 (62%), Positives = 72/96 (75%)
Frame = +2
Query: 212 LQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 391
+QG F F VQGGD T +GTGG+SIYG KFEDENF LKH G+LSMAN+G +T
Sbjct: 117 VQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNT 176
Query: 392 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
NGSQFFITT +T LDG+HVVFG V++GM VV+ +E
Sbjct: 177 NGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVE 212
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG 212
PR F DV++ G+IVIEL + V P+T ENFRALCTGEKG G
Sbjct: 26 PRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVG 69
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 125 bits (302), Expect = 3e-29
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 427
F VQGGD T +GTGG+SIYG FEDENF LKH G+LSMANAG DTNGSQFFITT +T
Sbjct: 111 FMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRT 170
Query: 428 SWLDGRHVVFGNVVEGMEVVKQIE 499
LDG+HVVFG V++GM VV+ +E
Sbjct: 171 PHLDGKHVVFGRVIKGMGVVRSME 194
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG 206
PR + DV++ G+IV+EL + V P+T ENFRALCTGEKG
Sbjct: 33 PRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKG 74
>10_01_0309 + 3417602-3418147
Length = 181
Score = 119 bits (287), Expect = 2e-27
Identities = 60/115 (52%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Frame = +2
Query: 197 RERLRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIY---GNKFEDENFTLKHTGPGVLS 367
+ RL +G F P F QGGD T NGTGG+S F DE F +KH GPGV+S
Sbjct: 57 KSRLHYKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVS 116
Query: 368 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRPLR 532
MANAG +TNGSQFFIT K WLDGRHV FG VV GM V+ I+ G G+ ++
Sbjct: 117 MANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVK 171
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = +3
Query: 75 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFH 233
S PRVF D+ + +G++VIEL +D P T ENFR LCTGE+ YKGS FH
Sbjct: 9 SNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFH 68
Query: 234 RVIPNFMCKEG 266
RV+P FMC+ G
Sbjct: 69 RVVPGFMCQGG 79
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 112 bits (270), Expect = 2e-25
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 394
+G F F +QGGDF N+NGTGG+SIYG F+DENFTLKHTGPGVLSMANAG DTN
Sbjct: 111 KGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTN 170
Query: 395 GSQFFITTVKTS 430
GSQFFI TVK S
Sbjct: 171 GSQFFICTVKFS 182
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKE 263
+ FFDV V P G+IVI L +V PKT +NFRALCTG+KG+GYKG FHR+I +FM +
Sbjct: 67 KCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMIQG 126
Query: 264 G 266
G
Sbjct: 127 G 127
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 109 bits (261), Expect = 3e-24
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F VQGGD T G GG+SIYG KFEDE LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 58 FIVQGGDPTG-TGRGGESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAP 116
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIETFGASLG-RPLRE-SLSKTVVR 559
LDG+H +FG V +GME+VK++ + RP+ E + +TVV+
Sbjct: 117 CQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSDRPIHEVKILRTVVK 163
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +3
Query: 96 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSP 275
+VT++ + +G IE+ PKTC NF L +G+ Y IFHR+I +F+ +G P
Sbjct: 11 EVTLETS-MGAFTIEMYYKHAPKTCRNFLEL--SRRGY-YDNVIFHRIIKDFIV-QGGDP 65
Query: 276 TITALGESPSTAISLKTRISP 338
T T G + I P
Sbjct: 66 TGTGRGGESIYGAKFEDEIRP 86
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 107 bits (257), Expect = 9e-24
Identities = 53/85 (62%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F +Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV
Sbjct: 544 FMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVA 602
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIE 499
T WLD +H VFG VV+GM+VV+QIE
Sbjct: 603 TPWLDNKHTVFGRVVKGMDVVQQIE 627
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/68 (39%), Positives = 32/68 (47%)
Frame = +3
Query: 63 TGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 242
T SLP D V +G I + L + PKT ENF C G+ Y IFHRVI
Sbjct: 489 TATTSLP----DNLVMHTSMGDIHLRLYPEECPKTVENFTTHC--RNGY-YDNLIFHRVI 541
Query: 243 PNFMCKEG 266
FM + G
Sbjct: 542 KGFMIQTG 549
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 107 bits (257), Expect = 9e-24
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 427
F QGGDF+N +G+GG+SIYG FEDENF L+H G+LSMANAG +TNGSQFFIT
Sbjct: 71 FMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHN 130
Query: 428 SWLDGRHVVFGNVVEGMEVVKQIE 499
S LD + VFG ++ G +V+K+IE
Sbjct: 131 SRLDRKSTVFGKLILGNDVLKRIE 154
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 8/74 (10%)
Frame = +3
Query: 69 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 224
K P VF DV++ D P ++V EL +DV P+T ENFRALCTGE G G YKGS
Sbjct: 3 KKKNPIVFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGS 62
Query: 225 IFHRVIPNFMCKEG 266
+FHRVI FM + G
Sbjct: 63 LFHRVIKGFMAQGG 76
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 90.6 bits (215), Expect = 1e-18
Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F +QGGD T G GG SI+G KF DE +LKH GV+SMAN+G +TNGSQFFIT K
Sbjct: 49 FMIQGGDPTG-TGKGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAK 107
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIETFGASLG-RPLRE 535
L+G + VF V+ G EV+ +E G RPL E
Sbjct: 108 QPHLNGHYTVFAKVIHGFEVLDLMEKAQTGPGDRPLAE 145
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/58 (48%), Positives = 33/58 (56%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
LG I E+ D P+T ENF ALC G+ Y G+IFHR I FM +G PT T G
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCA--SGY-YDGTIFHRNIKGFMI-QGGDPTGTGKG 62
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 84.2 bits (199), Expect = 9e-17
Identities = 50/108 (46%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Frame = +2
Query: 218 GLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTN 394
GL F F +QGGD T G+GG+SI+G F+DE N L H+G GV+SMAN+G TN
Sbjct: 383 GLIFHRSIKNFMIQGGDPTG-TGSGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTN 441
Query: 395 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGA-SLGRPLRE 535
GSQFFI L+ +H VFG VV G+ + +E RPL E
Sbjct: 442 GSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPVDDDDRPLEE 489
Score = 54.4 bits (125), Expect = 9e-08
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
G + +EL D+TP+TCENF C E G+ Y G IFHR I NFM +G PT T G
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIKNFMI-QGGDPTGTGSG 406
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +2
Query: 191 HWRERLRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 370
H + L +G F P F +QGGD +G G V++M
Sbjct: 82 HKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGS---------------------VIAM 120
Query: 371 ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGASLGRPLRE 535
AN+G D+NGSQF+ITT+KTSWLDG HVVFG V++GM+ V IE G G+P ++
Sbjct: 121 ANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKK 176
Score = 77.0 bits (181), Expect = 1e-14
Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 11/78 (14%)
Frame = +3
Query: 66 GKMSLP----RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG------- 212
G++ LP RV+ DV +D +G+IVI L DV PKT NFRALCTGE+G G
Sbjct: 29 GEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLH 88
Query: 213 YKGSIFHRVIPNFMCKEG 266
YKGS FHR+IP FM + G
Sbjct: 89 YKGSRFHRIIPGFMIQGG 106
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 73.3 bits (172), Expect = 2e-13
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE---KGF--GYKGSIFHRVIP 245
P VFFDVT+ P G+I +EL +D+ PKT ENFR CTGE G GYKG FHRVI
Sbjct: 37 PVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIK 96
Query: 246 NFMCKEG 266
+FM + G
Sbjct: 97 DFMIQGG 103
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 379
+G F F +QGGD+ +GTG SIYG KF+DENF KHTGPG+LSM +
Sbjct: 87 KGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +2
Query: 401 QFFITTVKTSWLDGRHVVFGNVV-EGMEVVKQIE 499
QFFIT K WLD +HVVFG V+ +GM V++IE
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIE 233
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD-TNGSQFFITTV 421
F VQGGD T +GTGG+SIYG F DE T L+ G+++ ANAG +NGSQFFI+
Sbjct: 61 FLVQGGDPTG-SGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLD 119
Query: 422 KTSWLDGRHVVFGNV 466
+ WLD ++ +FG V
Sbjct: 120 RCDWLDKKNTIFGKV 134
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
G + IEL PK NF LC +G+ Y G++FHRVI +F+ +G PT + G
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLV-QGGDPTGSGTG 74
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 236
P VFFD+ + +I EL +DV PKT ENFRALCTGE+G G +KG+ HR
Sbjct: 8 PHVFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHR 67
Query: 237 VIPNFMCKE-GTSPT 278
++ FM + SPT
Sbjct: 68 ILKGFMAQNTSLSPT 82
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 419 VKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRPLRE 535
V TS + +HVVFG VV GM ++K++E G+ G+P E
Sbjct: 87 VSTSCVS-KHVVFGKVVTGMPLLKKLEAVGSDTGKPTCE 124
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 66.1 bits (154), Expect = 3e-11
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Frame = +2
Query: 182 CPVHWRERLRL------QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIY----GNK---FE 322
CP+ + L+L G F F Q GD T G GG S+Y G++ F+
Sbjct: 21 CPLTTKNFLKLCKMKYYNGCLFHKVEKDFLAQTGDPTG-TGAGGDSVYKFLYGDQARFFD 79
Query: 323 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 496
DE L+H+ G ++MA+AG + N SQF+IT +LD +H VFG V EG + + +I
Sbjct: 80 DEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHTVFGMVAEGFDTLTKI 139
Query: 497 -ETFGASLGRPLRE 535
ET+ GRP ++
Sbjct: 140 SETYVDDKGRPFKD 153
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
+G I ++L +D+ P T +NF LC K Y G +FH+V +F+ + G PT T G
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC---KMKYYNGCLFHKVEKDFLAQTG-DPTGTGAG 62
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Frame = +2
Query: 221 LHFPSCHPQFHVQGGDFTNH-NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 397
L F S H H+Q F+ +G + ++ E L+H+ G ++MA+AG + N
Sbjct: 79 LVFLSLHYFVHIQNYLFSRFLSGAMATRFFDDEIHPE---LRHSKMGTIAMASAGENCNA 135
Query: 398 SQFFITTVK-TSWLDGRHVVFGNVVEGMEVVKQI-ETFGASLGRPLRE 535
SQF+IT +LD +H VFG V EG + + +I ET+ GRP ++
Sbjct: 136 SQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKINETYVDDKGRPFKD 183
Score = 34.3 bits (75), Expect = 0.099
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPN--FMCKEGTS 272
+G I ++L +D+ P T +NF LC G +G G F + + + C+ G +
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRKQLSGQFWRCRAGAT 61
>02_01_0086 + 613113-613532
Length = 139
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/104 (29%), Positives = 48/104 (46%)
Frame = +2
Query: 188 VHWRERLRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLS 367
++ ++ L +GL +P+ HV+G + +ENF L H P
Sbjct: 18 LYTKKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRRHLPNENFLLPHDRPW--- 74
Query: 368 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+ N A+ N SQFF + W DG +VVFG ++ G +K IE
Sbjct: 75 LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIE 115
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 135 IELRSDVTPKTCENFRALCTGEKGFGYKG 221
+EL +D+ P T ENFRAL T +K YKG
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKG 28
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADT 391
+G+ F F +QGGDF + NG + I K EN + KH + + N +
Sbjct: 131 KGMPFRHVIKNFVIQGGDF-DFNGAAQEWILKAKASGENALSPKHEAFMIGTTKNP--NN 187
Query: 392 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
G FITT L+ + VVFG V+ G ++V++IE
Sbjct: 188 KGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIE 223
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKE 263
+ F DV++ P G+I I L D P F +L T G GY+ F +++P ++
Sbjct: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVPGYVQHG 132
Query: 264 G--TSPTITALGE 296
G + P I A+ E
Sbjct: 133 GVVSYPAIPAVTE 145
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 380 GADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 496
G NG++F ITT LD +V G VV+GM+V+ +I
Sbjct: 202 GVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 335 TLKHTGPGVLSMA-NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
T+KH G+LSM ++ ++ GS F I LDG++ VFG + +G + ++++E
Sbjct: 156 TVKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLE 210
>10_01_0310 + 3425099-3425218
Length = 39
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTG 197
G +VIE +D PKT ENFR +CTG
Sbjct: 8 GSVVIEQFADKVPKTTENFRPMCTG 32
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 108 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 242
D PLG+++ L + P T NF+A CT Y+G++ H+++
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACTSA---AYRGTLVHKLL 164
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Frame = +2
Query: 332 FTLKHTGPGVLSMANAGADTNGS----------QFFITTVKTSW--LDGRHVVFGNVVEG 475
F LKH PG LS+ D + +F +TT LDG+++VFG V+EG
Sbjct: 201 FELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDGQNIVFGTVLEG 260
>12_02_1032 +
25542420-25542573,25543511-25543577,25543816-25543918,
25544435-25544505,25544639-25544702,25545260-25545316,
25545435-25545593,25545967-25546035,25546111-25546202,
25546579-25546657,25546923-25547088,25547480-25547604,
25547737-25548078,25548271-25548432,25548520-25548624,
25548766-25548860,25548948-25549044,25549848-25550165,
25550228-25550296
Length = 797
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 220 PL*PKPFSPVHRARKFSHVLGVTSLLSSITIFPSGASSTVTSKNTRGRDILP 65
PL P SP+ R+ H + + + +++ PS +SSTVTS G D P
Sbjct: 722 PLLLSPRSPMSELRRPLH-MPFSPVRKAVSPSPSSSSSTVTSPRNAGEDQKP 772
>09_04_0308 +
16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -2
Query: 421 DSGDEELGTISISTGISHGEDARSSVLKGEILVFKLIAVDGLSPSAVMVGEVPSLHMKLG 242
D GD +++S ++ + S + I+VF VDG+ P+ + G + +H++LG
Sbjct: 342 DGGDNHRSKVTLSGLLNFTDGLWSCCGEERIIVFTTNHVDGIDPALLRPGRM-DVHVRLG 400
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 233 SCHPQFHVQGGDFTNHNGTGGKSIYGN 313
S +PQ QGG + N G GG YGN
Sbjct: 410 SRYPQGGNQGGGYPNRGGQGGGGSYGN 436
>07_03_1767 +
29338867-29338912,29339261-29339325,29339571-29339642,
29339913-29339956,29340047-29340158,29340879-29340950,
29341449-29341511,29341957-29342034,29342110-29342202,
29342294-29342413,29342762-29342845,29343094-29343309,
29343401-29343448,29343761-29343871,29344170-29344267,
29345004-29345248,29345764-29345832,29345919-29345983,
29346168-29346337,29346434-29346512,29346614-29346869,
29347416-29347461,29347602-29347710,29347820-29347882,
29350075-29350107,29350924-29351442
Length = 991
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -2
Query: 361 DARSSVLKGEILVFKLIAVDGLSPSAVMVGEV 266
DA +V GEIL+ ++ V G++PS V++ ++
Sbjct: 778 DAFVNVQNGEILLIEVNTVPGMTPSTVLIHQI 809
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 492 CLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAM 367
C T ++P +T PK+ L +S L V M+N + S ALA+
Sbjct: 2901 CFTAALPLSTIPKS--LNNSHFALEVTMRNGKKHASLRALAI 2940
>06_01_0719 +
5239238-5239635,5239735-5239945,5240379-5240454,
5240573-5240675,5241089-5241157,5241318-5241354,
5241445-5241519,5241598-5241649,5241752-5241796,
5241994-5242080,5242348-5242445
Length = 416
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +1
Query: 70 KCLYHEYSSTSLLTMPHW 123
+CL+HEY+++S + +P W
Sbjct: 396 RCLFHEYNTSSQIFLPIW 413
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 394 ISISTGISHGEDARSSVLKGEILVF 320
++I T I HG D R+S L GE LVF
Sbjct: 119 LAILTAIFHGVDPRTSFLIGEGLVF 143
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 23 CHCGGFVNCLHC*YRQNVSTT 85
CHCG V+ C Y N++ T
Sbjct: 613 CHCGAMVHAFECMYYNNLNAT 633
>02_05_0554 + 29929860-29929959,29932944-29934220
Length = 458
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = -3
Query: 561 NLTTVFDNDSLRGLPRLAPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSA 382
+L T+ D+ ++ + RL V L+ ++ + K T S+ +L K VSA
Sbjct: 334 SLPTIIDSGTV--ITRLPTSVYSALSKAVAAAM--KGTSRASAYSILDTCFKGQASRVSA 389
Query: 381 PALAMERTPGPVCLRVKFSSSNLLP*MD 298
PA+ M G +K S+ NLL +D
Sbjct: 390 PAVTMSFAGGAA---LKLSAQNLLVDVD 414
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,135,068
Number of Sequences: 37544
Number of extensions: 492694
Number of successful extensions: 1345
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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