Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00913
(722 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 163 8e-41
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 163 8e-41
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 159 2e-39
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 156 2e-38
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 155 2e-38
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 155 3e-38
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 150 1e-36
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 149 2e-36
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 146 1e-35
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 145 2e-35
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 133 1e-31
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 133 1e-31
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 125 3e-29
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 120 1e-27
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 110 8e-25
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 109 1e-24
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 104 5e-23
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 90 2e-18
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 89 2e-18
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 86 3e-17
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 82 3e-16
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 77 2e-14
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 62 5e-10
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 45 6e-05
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 37 0.012
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 36 0.036
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 36 0.036
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 36 0.036
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 35 0.063
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.58
At5g07880.1 68418.m00908 SNAP25 homologous protein, putative / s... 30 1.8
At3g51360.1 68416.m05624 aspartyl protease family protein contai... 28 5.5
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 7.2
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 7.2
At5g42870.1 68418.m05225 lipin family protein contains Pfam prof... 27 9.5
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 27 9.5
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.5
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.5
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 9.5
At1g63470.1 68414.m07177 DNA-binding family protein contains a A... 27 9.5
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 9.5
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 163 bits (397), Expect = 8e-41
Identities = 75/109 (68%), Positives = 86/109 (78%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRPLR 532
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE G+S G+P +
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTK 161
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/72 (61%), Positives = 55/72 (76%), Gaps = 7/72 (9%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 231 HRVIPNFMCKEG 266
HRVIPNFMC+ G
Sbjct: 61 HRVIPNFMCQGG 72
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 163 bits (397), Expect = 8e-41
Identities = 75/109 (68%), Positives = 85/109 (77%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRPLR 532
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE G+S G+P +
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTK 162
Score = 97.5 bits (232), Expect = 8e-21
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 7/71 (9%)
Frame = +3
Query: 75 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 233
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 234 RVIPNFMCKEG 266
RVIPNFMC+ G
Sbjct: 63 RVIPNFMCQGG 73
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 159 bits (385), Expect = 2e-39
Identities = 74/107 (69%), Positives = 82/107 (76%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F +QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G
Sbjct: 81 LHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGE 140
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G G P
Sbjct: 141 DTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTP 187
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 242
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 243 PNFMCKEG 266
P+FM + G
Sbjct: 93 PSFMIQGG 100
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 156 bits (378), Expect = 2e-38
Identities = 72/106 (67%), Positives = 83/106 (78%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P+F QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGR 523
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE G+ GR
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGR 159
Score = 87.4 bits (207), Expect = 8e-18
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 7/69 (10%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 239
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 240 IPNFMCKEG 266
IP FMC+ G
Sbjct: 65 IPKFMCQGG 73
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 514 SGKTSKRIVIKDCGQIA 564
SG+TSK +VI DCGQI+
Sbjct: 157 SGRTSKPVVIADCGQIS 173
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 155 bits (377), Expect = 2e-38
Identities = 71/107 (66%), Positives = 82/107 (76%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G
Sbjct: 53 LHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGP 112
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
+TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E G+ +G P
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNP 159
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 231 HRVIPNFMCKEG 266
HR+IP FMC+ G
Sbjct: 61 HRIIPGFMCQGG 72
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 155 bits (376), Expect = 3e-38
Identities = 73/107 (68%), Positives = 80/107 (74%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F +QGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG
Sbjct: 84 LHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQ 143
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G G P
Sbjct: 144 DTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTP 190
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 242
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 243 PNFMCKEG 266
P+FM + G
Sbjct: 96 PSFMLQGG 103
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 150 bits (363), Expect = 1e-36
Identities = 70/107 (65%), Positives = 80/107 (74%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F +QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G
Sbjct: 108 LYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGP 167
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G G P
Sbjct: 168 DSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVP 214
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 242
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 243 PNFMCKEG 266
P FM + G
Sbjct: 120 PGFMIQGG 127
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 149 bits (360), Expect = 2e-36
Identities = 67/96 (69%), Positives = 78/96 (81%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 394
+G F F +QGGDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TN
Sbjct: 140 KGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTN 199
Query: 395 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIET 502
GSQFFI TVKTSWLD +HVVFG V+EGM++V+ +E+
Sbjct: 200 GSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLES 235
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKE 263
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +FM +
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 264 G 266
G
Sbjct: 156 G 156
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 146 bits (354), Expect = 1e-35
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 427
F +QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KT
Sbjct: 149 FMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKT 208
Query: 428 SWLDGRHVVFGNVVEGMEVVKQIE 499
SWLDGRHVVFG V+EGMEVVK IE
Sbjct: 209 SWLDGRHVVFGQVIEGMEVVKLIE 232
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 251
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 252 MCKEG 266
M + G
Sbjct: 150 MIQGG 154
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 145 bits (352), Expect = 2e-35
Identities = 68/106 (64%), Positives = 80/106 (75%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G
Sbjct: 53 LHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGP 112
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGR 523
+TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE G+ G+
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGK 158
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 231 HRVIPNFMCKEG 266
HRVIP FMC+ G
Sbjct: 61 HRVIPGFMCQGG 72
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 514 SGKTSKRIVIKDCGQIA 564
SGKTSK + I DCGQ++
Sbjct: 156 SGKTSKVVTITDCGQLS 172
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 133 bits (322), Expect = 1e-31
Identities = 64/107 (59%), Positives = 74/107 (69%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G S G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 8/74 (10%)
Frame = +3
Query: 69 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 224
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 225 IFHRVIPNFMCKEG 266
FHRVI FM + G
Sbjct: 63 SFHRVIKGFMAQGG 76
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 133 bits (322), Expect = 1e-31
Identities = 64/107 (59%), Positives = 74/107 (69%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G S G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 8/74 (10%)
Frame = +3
Query: 69 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 224
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 225 IFHRVIPNFMCKEG 266
FHRVI FM + G
Sbjct: 63 SFHRVIKGFMAQGG 76
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 125 bits (301), Expect = 3e-29
Identities = 59/98 (60%), Positives = 73/98 (74%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F +QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G
Sbjct: 54 LHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGP 113
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+TNGSQFFITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 114 NTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIE 151
Score = 70.9 bits (166), Expect = 8e-13
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 227
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 228 FHRVIPNFMCKEG 266
FHRVI FM + G
Sbjct: 61 FHRVIKGFMIQGG 73
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 120 bits (288), Expect = 1e-27
Identities = 54/85 (63%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 427
F VQ GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 93 FMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKC 152
Query: 428 SWLDGRHVVFGNVV-EGMEVVKQIE 499
WLD +HVVFG V+ +G+ V+++IE
Sbjct: 153 DWLDNKHVVFGRVLGDGLLVMRKIE 177
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 245
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 246 NFMCKEG 266
+FM + G
Sbjct: 92 DFMVQSG 98
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 110 bits (265), Expect = 8e-25
Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F VQGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 58 FIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAP 116
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIETFGA-SLGRPLRE 535
LDG+H +FG V GMEV+K++ + + RP+ E
Sbjct: 117 QPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHE 154
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +3
Query: 96 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSP 275
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F+ +G P
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIV-QGGDP 65
Query: 276 TITALG 293
T T G
Sbjct: 66 TGTGRG 71
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 109 bits (263), Expect = 1e-24
Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F +QGGD + +G SIYG F DENF ++H+ G+++MAN G
Sbjct: 96 LHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGP 155
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGASLGRPLRE 535
D+NGSQFFITTVK SWL+G HVV G V++GM+ V IE G G+P ++
Sbjct: 156 DSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKK 206
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 242
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 243 PNFMCKEG 266
F+ + G
Sbjct: 108 SGFVIQGG 115
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 104 bits (250), Expect = 5e-23
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F +Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV
Sbjct: 524 FMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVA 582
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIE 499
T WLD +H VFG VV+GM+VV+ IE
Sbjct: 583 TPWLDNKHTVFGRVVKGMDVVQGIE 607
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEG 266
LG I ++L + PKT ENF C G+ Y +FHRVI FM + G
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTG 529
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 89.8 bits (213), Expect = 2e-18
Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F +QGGD G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K
Sbjct: 49 FMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAK 107
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIETFGASLG-RPLRE 535
L+G + +FG V+ G EV+ +E G RPL E
Sbjct: 108 QPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAE 145
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM +G P T G
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCA--SGY-YDGTIFHRNIKGFMI-QGGDPKGTGKG 62
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/107 (42%), Positives = 60/107 (56%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A
Sbjct: 57 LHYKGSFFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADR 116
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
D GS F IT LD +VVFG +++G E++K+IE G G+P
Sbjct: 117 DKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDEEGKP 163
Score = 72.1 bits (169), Expect = 3e-13
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Frame = +3
Query: 69 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 224
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 225 IFHRVIP-------NFMCKEGTSPTITALGESPSTAISLKTRISPLSTLDLA 359
FHR++ +F+ + GT+ G+ P + L+ + L ++ +A
Sbjct: 63 FFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIA 114
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 85.8 bits (203), Expect = 3e-17
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 200 ERLRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMAN 376
ER G+ F F +QGGD T G GG+SI+G F+DE N L H+G GV+SMAN
Sbjct: 376 ERGYYNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMAN 434
Query: 377 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGA-SLGRPLRE 535
+G TNGSQFF+ + L+ +H VFG VV G+ + +E RPL E
Sbjct: 435 SGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEE 488
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NFM +G PT T G
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMI-QGGDPTGTGKG 405
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 7/68 (10%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 231 HRVIPNFM 254
++P+ M
Sbjct: 61 DHIVPDLM 68
Score = 57.2 bits (132), Expect = 1e-08
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT-GPGVLSMANAG 382
+ +G F P GGD N + I+ + +DE F L H GPG++SMA
Sbjct: 53 IHYKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISMA--- 105
Query: 383 ADTNGSQFFITTVKTSW-LDGRHVVFGNVVEGMEVVKQIE 499
D+NGSQF I +DG HVV G VVEG+++++ IE
Sbjct: 106 -DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIE 144
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = +2
Query: 242 PQFHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFIT 415
P F VQGGD T +GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T
Sbjct: 59 PGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFT 117
Query: 416 TVKTSWLDGRHVVFGNV 466
K WLD +H +FG V
Sbjct: 118 LDKCDWLDKKHTIFGKV 134
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
G I +EL PK+ NF LC +G+ + +IFHRVIP F+ +G PT + G
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLV-QGGDPTGSGTG 74
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 61.7 bits (143), Expect = 5e-10
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Frame = +2
Query: 182 CPVHWRERLRL------QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIY----GNK---FE 322
CP+ + L+L G F + F Q GD T G GG SIY G + ++
Sbjct: 21 CPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYK 79
Query: 323 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 496
DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I
Sbjct: 80 DEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRI 139
Query: 497 -ETFGASLGRPLR 532
E + RP +
Sbjct: 140 NEAYVDPKNRPYK 152
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
LG IVI+L SD P TC+NF LC K Y G +FH V +F + G PT T G
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTG-DPTGTGAG 62
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFM 254
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 392 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 496
NG++F IT V + L+ +V G V+EGM VV+++
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKM 264
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 111 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITAL 290
D G + IEL D P + F C + G+ +KG +F RV+ +F+ + G S A+
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAV 139
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 394
+G F F +Q GD + ++ + +LKH ++ A +
Sbjct: 115 KGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQG 170
Query: 395 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 171 GFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPT 278
G I +EL + +P+ + F LC + +KG F RVI N++ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 401 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPT 278
G I +EL + +P+ + F LC + +KG F RVI N++ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 401 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPT 278
G I +EL + +P+ + F LC + +KG F RVI N++ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 401 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 34.7 bits (76), Expect = 0.063
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 108 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 245
D PLG++V+ L P T F+ +CT YK + H++ P
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFP 125
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 386 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 502
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.58
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -3
Query: 498 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 319
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At5g07880.1 68418.m00908 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25
homologous protein SNAP29
(AtSNAP29)(Synaptosomal-associated protein SNAP25-like
2) [Arabidopsis thaliana]; contains Pfam profile:
PF05739 SNARE domain
Length = 251
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 162 KTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALGESPS-TAISLKTR 329
KT + L GEK G G +F R + T P IT G+SP I LKTR
Sbjct: 106 KTVDLDHHLSRGEKILGRLGGVFSRTWKPKKSRSITGPVITK-GDSPKRKVIDLKTR 161
>At3g51360.1 68416.m05624 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 488
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -2
Query: 439 IQPGGLDSGDEELGTISISTGISHGEDARSSV--LKGEILVFKLIAVDGLSPSAVMVGEV 266
+ PG +G I +ST DAR + + ++ +FK +AV+G+ A+ V
Sbjct: 178 LSPGSKSTGVLVEDVIHMSTEEGEARDARITFGCSESQLGLFKEVAVNGIMGLAIADIAV 237
Query: 265 PSLHMKLGM 239
P++ +K G+
Sbjct: 238 PNMLVKAGV 246
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 55 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 180
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.9 bits (59), Expect = 7.2
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 266 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 433
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 434 LDGRHVVFGNVVEGMEVVKQIE 499
+VF N + EVV++++
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQ 596
>At5g42870.1 68418.m05225 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 930
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +2
Query: 251 HVQGGDFTNHNGTGGKSIYGNKFEDENFT---LKHTGP-GVLSMANAGADT 391
H+ GDF G+SI + E+E F+ L P G S+ ++ +DT
Sbjct: 371 HISAGDFEKSQSASGESILQPEIEEEQFSFSDLDECKPGGNSSVGSSSSDT 421
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 466 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 338
N+ D+ S+ + S D+E+G + S G G+D V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 414 VMKNWEPLVSAPALAMERTPGPVCLR 337
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 414 VMKNWEPLVSAPALAMERTPGPVCLR 337
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -3
Query: 459 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 292
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g63470.1 68414.m07177 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 378
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTN 277
+ + FP H QF++Q G FTN
Sbjct: 5 EAMAFPGSHSQFYLQRGVFTN 25
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 414 VMKNWEPLVSAPALAMERTPGPVCLR 337
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,918,285
Number of Sequences: 28952
Number of extensions: 389308
Number of successful extensions: 1118
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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