Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00911
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 54 1e-07
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 50 3e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 46 2e-05
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 43 3e-04
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 42 4e-04
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 41 9e-04
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 37 0.019
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 36 0.034
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 33 0.18
05_04_0138 - 18350298-18350579,18350648-18350878,18350977-183512... 33 0.24
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 30 2.2
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 29 3.9
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 29 3.9
02_05_0850 + 32209798-32210086,32210779-32212316 29 5.1
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342... 28 6.7
06_03_0714 - 23814826-23814997,23815080-23815164,23815680-238157... 28 8.9
04_03_0145 - 11799689-11800108 28 8.9
01_06_0951 + 33301850-33302175,33302318-33303216,33303327-33303934 28 8.9
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/79 (31%), Positives = 46/79 (58%)
Frame = +3
Query: 222 RIDDSPAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 401
R +SPA K LH+A+ G+GT++ +I ++ T + ++ I A Y + Y +SL +
Sbjct: 268 RCAESPAKYFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVH 327
Query: 402 GDTSGHFKRLCVSLCMANR 458
+TSG+++ +SL +R
Sbjct: 328 SETSGNYRTFLLSLIGRDR 346
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +3
Query: 258 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 428
+LH A G G D A+ IL I Y +Y + L L + SGH KR
Sbjct: 19 DLHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGHHKR 75
Score = 32.3 bits (70), Expect = 0.41
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +3
Query: 261 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLY----GKSLESDLKGDTSGHFKR 428
LH A++G TD A E++C+ + + + Y + G LE D+ SG +R
Sbjct: 92 LHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGGGGGGGLEHDVAVRASGDHQR 151
Query: 429 LCVSLCMANRDEN-QGIDEGSAKADA 503
L ++ + R E + +D +A DA
Sbjct: 152 LLLAYLRSPRYEGPEVVDMAAAARDA 177
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 225 IDDSPAPLLRKELHDAVSG-IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL- 398
+D + A +EL+ A +GTDE I + S + ++A Y +Y +SLE +
Sbjct: 168 VDMAAAARDARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLEKVIY 227
Query: 399 KGDTSGHFKRLCVSLCMAN 455
+ T+ + L SL N
Sbjct: 228 RSCTAAYALALVFSLSEFN 246
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GT+++ ++ TR+ ++ I AEY + + D++ E SG+ +L++
Sbjct: 289 GTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLSL 341
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 644 SIKKEFSGSIEKGMLAIAKCVKSKVGFFAE 733
++K E SG+ G+L I +C +S +FA+
Sbjct: 250 AVKSETSGNFGFGLLTILRCAESPAKYFAK 279
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +3
Query: 222 RIDDSPAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 401
R ++PA K L ++ G+GTD+ +I ++ T + ++ I A Y + Y KSL +
Sbjct: 225 RCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIH 284
Query: 402 GDTSGHFKRLCVSL 443
+TSG+++ +SL
Sbjct: 285 SETSGNYRTFLLSL 298
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 KELHDA-VSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 425
K+L+ A +GTDE+ I I S + ++++ Y +Y +SLE +K +TSG+F+
Sbjct: 160 KDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFE 217
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +3
Query: 261 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVS 440
L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG ++L ++
Sbjct: 79 LREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLA 138
Query: 441 LCMANRDENQGIDEGSAKADAE 506
R E +D DA+
Sbjct: 139 YVGIPRYEGPEVDPTIVTHDAK 160
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GTD+S +++TR+ ++ I AEY K + ++I E SG+ +L++
Sbjct: 246 GTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSL 298
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRR 112
LRK+MKG GTD+ +I V+ R
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTR 259
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +3
Query: 237 PAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 416
P K + A++G+GTDE ++ I+ T + ++ I+ Y++ LE + GDTSG
Sbjct: 244 PDRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSG 303
Query: 417 HFKRLCVSL 443
++R+ ++L
Sbjct: 304 DYERMLLAL 312
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 285 GTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDE 464
G+ ++EI C + + Y + + +SLE D+ +G F++L V L A R E
Sbjct: 102 GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLISAYRYE 161
Query: 465 NQGIDEGSAKADAE 506
++ A ++A+
Sbjct: 162 GPEVNTKLAHSEAK 175
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 533 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGML 688
WGT+E++ SIL R Q R I Y G+++ SI E SG E+ ++
Sbjct: 27 WGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78
Score = 35.5 bits (78), Expect = 0.044
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 258 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCV 437
+L A G GT+E II IL R I Y YG+ L + + SG F+R +
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78
Query: 438 --SLCMANRD 461
+L A RD
Sbjct: 79 LWTLDPAERD 88
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSRR 142
LRKA +G+GT+E II +L R Q RR
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRR 51
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHF 422
K LH+ + ++ II IL T S + Y YG + DLK D F
Sbjct: 175 KILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEF 230
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 527 GQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCV 706
G DE++ + RS QLR F Y+ + G D ++KK G E+ + + KC+
Sbjct: 182 GMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQSLRVVVKCI 241
Query: 707 KSKVGFFAE 733
+ +F++
Sbjct: 242 YNPSMYFSK 250
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 255 KELHDAV-SGIGT-DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 428
+ L+DA SG+G+ DE I+E+ S +R Y+ +YG LK + G F++
Sbjct: 173 RRLYDAKNSGMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQ 232
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +3
Query: 267 DAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLC 446
DA+ G D + ++E++CT + + I Y+ Y SLE D+ TSG + ++
Sbjct: 115 DALFGRRIDGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLLAFL 174
Query: 447 MANRDENQG--IDEGSAKADAEAWPPLVKVNGEPTNQSSTPSL 569
++ G +D A DA+ V+++ +Q S L
Sbjct: 175 GSSGSGYHGGRVDATMAMCDAKTLYEAVEISAARVDQRSVLQL 217
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/70 (24%), Positives = 38/70 (54%)
Frame = +3
Query: 234 SPAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 413
SP + + ++ G+GTDEE + + + + + + Y+ Y ++ +D++GDTS
Sbjct: 295 SPEKHFAEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTS 354
Query: 414 GHFKRLCVSL 443
G++ ++L
Sbjct: 355 GYYMNTLLTL 364
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 234 SPAPLLRKE-LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 410
+P+P E + AV G GTDE A+IEIL + I+ YE LY ++L L +
Sbjct: 56 APSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSEL 115
Query: 411 SGHFK 425
SG F+
Sbjct: 116 SGDFR 120
Score = 35.1 bits (77), Expect = 0.059
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 533 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGML 688
WGTDE+ IL R+ Q +I YE L + + D + E SG ++
Sbjct: 73 WGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALM 124
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 44 TLRKAMKGFGTDEKAIIDVLCRRGIVQ 124
++RKA++G+GTDE A+I++L R Q
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQ 91
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 130 EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYARSSTMLSQELEPTKKPSS 309
EIA ++ Y + L+ L SEL+G+ + ++ L T P AR + + ++ L+ KK
Sbjct: 94 EIAVAYEGLYDETLLDRLHSELSGDFRSALM-LWTMDP--AARDAKLANEALKKKKKGEL 150
Query: 310 R 312
R
Sbjct: 151 R 151
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 533 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGM 685
WGTDE +L R Q +QI YE +++ ++ E SG +E+ M
Sbjct: 27 WGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAM 77
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 270 AVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 428
A G GTDE+A+I +L + I YE+ Y ++L L+ + SG +R
Sbjct: 23 AFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLER 75
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSR 139
L KA +G+GTDE+A+I VL R Q + R
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIR 50
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1
Query: 130 EIAETFKTNYGKDLISELKSELTGNLENVI 219
+I T++ NY ++LI L+SEL+G+LE +
Sbjct: 48 QIRLTYEENYNENLIQRLQSELSGDLERAM 77
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 35.9 bits (79), Expect = 0.034
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
++L A G GT+E+ II IL R I Y + YG+ L L + G F+ L
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE-LL 76
Query: 435 VSLCMANRDENQGIDEGSAKADAE 506
V L R + ++ A ++A+
Sbjct: 77 VPLVTVYRYDGPEVNTSLAHSEAK 100
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSRR 142
LRKA KG+GT+EK II +L R Q RR
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRR 51
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +3
Query: 237 PAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 416
P K + A+ G+GTDE ++ I+ T + ++ I Y++ LE + DT+
Sbjct: 169 PDRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKDTTR 228
Query: 417 HFKRLCVSL 443
++ + ++L
Sbjct: 229 DYEDILLAL 237
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 533 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIE 676
WGT+E + SIL R Q R I Y G+++ ++ E G E
Sbjct: 27 WGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE 74
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 715
G DE + I+ TRS QLR F Y G DI + I G + + C+ S
Sbjct: 174 GEDEVV--RIVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTSP 231
Query: 716 VGFFAE 733
FAE
Sbjct: 232 EKHFAE 237
>05_04_0138 -
18350298-18350579,18350648-18350878,18350977-18351253,
18351307-18351487,18351612-18351651
Length = 336
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 303 IIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH-FKRLCVSLCMANRDENQGID 479
++EI CT + + Y+ L+ SLE D+ + L V L A R E +
Sbjct: 124 VVEIACTRTAEELLGARKAYQALFHHSLEEDVAYRARDKPYCGLLVGLVSAYRYEGPRVS 183
Query: 480 EGSAKADAEAWPPLVKVNG 536
E +A+A+A+A VK G
Sbjct: 184 EETARAEAKALVAAVKSAG 202
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 501 AEAWPPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKL*PEKTL 638
A A P ++K + P+ ++PS S A D S+PST PE+T+
Sbjct: 2002 APASPAVIKSSDTPSLNLNSPSSSSAGSRGQDASTPSTFEEPERTM 2047
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 249 LRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 362
L+ L D +S T EE ++ LC LS+Y ++++ Y
Sbjct: 699 LKISLSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIY 736
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -1
Query: 358 NADMVRIP*LESVHRISMMASSSVPIPETASWSSLRRSGAGESSMRR 218
NA V IP H + SSS P P T + S R++ AGE+ RR
Sbjct: 1707 NAKEVGIP----AHSVHEPVSSSAPHPPTPATSRGRKTQAGETPRRR 1749
>02_05_0850 + 32209798-32210086,32210779-32212316
Length = 608
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 565 DGVED*FVGSPLTFTSGGQASASALAEPSSMPWFSSRL 452
D VED + +P T GG ++ A+ S PWF R+
Sbjct: 431 DAVEDAAMPTPPTTPHGGSNNSKAVLITSLRPWFYERV 468
>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
26834330-26834732,26834840-26835118,26835285-26835716,
26836362-26836838,26837171-26837212,26837285-26837545,
26837637-26838938,26839146-26839575,26839643-26840046,
26840360-26840716,26840842-26841102,26841494-26842141,
26842231-26842452,26842547-26842768,26842860-26843009,
26843739-26844111,26844467-26844689,26845167-26845425,
26845585-26845920,26846013-26846999,26848395-26849624,
26849706-26849768,26849858-26849910,26849998-26850079,
26850520-26850588,26851070-26851129,26851205-26851267,
26851993-26852101,26852742-26852827,26853120-26853847,
26854613-26854676
Length = 3716
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 216 HRRIDDSPAPLLRKELHDAVSGIGTDEEAIIEI 314
H R DSP + +++L+ A+SG EA++E+
Sbjct: 3448 HNREADSPITIFKEQLNQAISG-QVSPEAVVEL 3479
>06_03_0714 -
23814826-23814997,23815080-23815164,23815680-23815791,
23817203-23817304,23817375-23817447,23817918-23817997,
23818076-23818267,23818945-23819064,23819157-23819244,
23819319-23819353,23819447-23819518,23819860-23819931,
23820054-23821189,23822011-23822362
Length = 896
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 432 CVSLCMANRDENQGIDEGSAKADAEAWPPLVKVNGEPTNQSSTPSLS 572
CVSL + +ENQ + G+ ++ W + + T+Q + S+S
Sbjct: 468 CVSLSSSMMEENQSVTHGNQQSINVDWNKVASMVSNATSQVFSTSIS 514
>04_03_0145 - 11799689-11800108
Length = 139
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 538 SPLTFTSGGQASASALAEPSSMPWFSS 458
+P+ GG +A+ A P++ PWFSS
Sbjct: 13 TPMAPGCGGWCTAATAAGPTNHPWFSS 39
>01_06_0951 + 33301850-33302175,33302318-33303216,33303327-33303934
Length = 610
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 250 YARSSTMLSQELEPTKKPSSRSCARFPTMVSVPY-PHFTNNCTARAWNR 393
YA S L P KPS + PTM + P NN TA A +R
Sbjct: 338 YASSECYFGLNLNPMCKPSDVAYTLIPTMCYYEFLPVNCNNATAEASHR 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,604,823
Number of Sequences: 37544
Number of extensions: 427000
Number of successful extensions: 1528
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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