Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00911
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 72 6e-13
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 66 3e-11
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 63 3e-10
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 60 1e-09
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 50 1e-06
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 50 2e-06
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_7583| Best HMM Match : PT (HMM E-Value=6.1) 29 3.0
SB_35708| Best HMM Match : WD40 (HMM E-Value=1.2) 29 3.9
SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13) 29 5.2
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 28 6.9
SB_31687| Best HMM Match : DUF420 (HMM E-Value=6.3) 28 9.1
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 28 9.1
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 71.7 bits (168), Expect = 6e-13
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
+ L+ A+ G+GT E +IEILCT SN I+ I Y + YG+SL D+K +TSG F+ L
Sbjct: 519 RSLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLL 578
Query: 435 VSLCMANRDENQGIDEGSAKADAEA 509
+L +RDE+ +++ DA A
Sbjct: 579 ETLLKGSRDESTDVNKELVTKDAAA 603
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALT-GKDIEDSIKKEFSGSIEKGMLAI 694
G +WGTDE F +IL RS ++ + AEY+ L+ G + D+++ E G + +L +
Sbjct: 608 GVARWGTDEDQFITILSQRSSAHVQAVLAEYKTLSGGVSLADTVRDEMKGDLRDALLVL 666
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEY 613
G +WGTDE F I TRSY QL+ +F EY
Sbjct: 182 GIKKWGTDEDCFIEIFTTRSYPQLQAMFPEY 212
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +3
Query: 249 LRKELHDAVSGI---GTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 419
L ++LH+AV+ + G + +A + + N I +I Y++ YG SLE D+K +TSG
Sbjct: 58 LEEDLHEAVAAMLLPGNEADART-LYFAMKN--IDSIKEEYQKKYGCSLEDDVKEETSGD 114
Query: 420 FKRLCVSL 443
F+ L V+L
Sbjct: 115 FEDLLVAL 122
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 700
GT E+ IL TRS ++++I EY G+ + D +K E SG E + + K
Sbjct: 529 GTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLETLLK 583
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALT-GKDIEDSIKKE 658
G +WGT+E F +IL RS ++ + AEY L+ G + D+I+ E
Sbjct: 781 GVARWGTEEDQFITILTQRSSAHVQAVLAEYRTLSGGVTLADTIRDE 827
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 130 EIAETFKTNYGKDLISELKSELTGNLENVIVALM 231
EI + + YG+ L ++KSE +G+ EN++ L+
Sbjct: 549 EIKQEYNKKYGRSLTDDMKSETSGDFENLLETLL 582
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 133 IAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYARSSTMLSQELEPTKKP 303
I E ++ YG L ++K E +G+ E+++VALM+ R ST++ ++ KP
Sbjct: 91 IKEEYQKKYGCSLEDDVKEETSGDFEDLLVALMS------VRISTLIYHLIKTPSKP 141
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 44 TLRKAMKGFGTDEKAIIDVLCRR 112
+L AMKG GT E +I++LC R
Sbjct: 520 SLYYAMKGLGTKEAQLIEILCTR 542
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/78 (44%), Positives = 46/78 (58%)
Frame = +3
Query: 240 APLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 419
A LLRK A+ G+GTDE +IE+L T +N I I Y L+ + LE D+ GDTSG
Sbjct: 162 ATLLRK----AIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIAGDTSGK 217
Query: 420 FKRLCVSLCMANRDENQG 473
FK+ +SLC A +G
Sbjct: 218 FKKFLISLCNALYKAGEG 235
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEY 613
GEG+WGTDES FNSIL +RS+ QLR F EY
Sbjct: 233 GEGRWGTDESKFNSILASRSFDQLRATFNEY 263
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +1
Query: 112 RHRASLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTP 237
R R SLE +KT +G+DLI +LKSE+ G E+ ++ALMTP
Sbjct: 119 RQRISLE----YKTMFGRDLIKDLKSEVGGYFEDTVIALMTP 156
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +3
Query: 285 GTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSL 443
G D +A++ +LC+ +N + IS Y+ ++G+ L DLK + G+F+ ++L
Sbjct: 101 GCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIAL 153
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCV 706
GTDE++ +L TR+ ++ I Y L +D+E I + SG +K ++++ +
Sbjct: 173 GTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIAGDTSGKFKKFLISLCNAL 229
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
G D +L +R+ Q ++I EY+ + G+D+ +K E G E ++A+
Sbjct: 101 GCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIAL 153
Score = 32.3 bits (70), Expect = 0.42
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRR 112
LRKA+KG GTDE +I+VL R
Sbjct: 165 LRKAIKGLGTDEAVLIEVLTTR 186
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/71 (40%), Positives = 47/71 (66%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 700
GE +WGTDES FN +L +RS+ QL+ F EY ++ +DI +SI +E SG ++ G+ +
Sbjct: 25 GEKKWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNSIDREMSGDLKAGL----Q 80
Query: 701 CVKSKVGFFAE 733
C ++ +FA+
Sbjct: 81 CARNPAEYFAD 91
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = +3
Query: 234 SPAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 413
+PA L ++ G GTD+ +I ++ + S + I A + Q Y K++ ++GD S
Sbjct: 84 NPAEYFADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCS 143
Query: 414 GHFKRLCVSLCMAN 455
G +K+L ++L N
Sbjct: 144 GDYKKLLMALPSPN 157
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 700
G WGTDE F + RS+ Q+ + AEY+ LT +IE+SI KE G ++K L + K
Sbjct: 133 GVASWGTDEGAFIRVFTQRSFTQISAMCAEYKKLTKVEIEESIDKEMDGDMQKAFLTLVK 192
Query: 701 CVKSKVGF 724
+ GF
Sbjct: 193 ISRDPTGF 200
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIR 344
K L++A G GTDE+A+I ILCT SN G R
Sbjct: 82 KTLYEATKGFGTDEDALISILCTRSNKGQR 111
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSN 332
K LHDA+ G+GTDE+ +IEI+CT N
Sbjct: 427 KCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 44 TLRKAMKGFGTDEKAIIDVLCRR 112
TL +A KGFGTDE A+I +LC R
Sbjct: 83 TLYEATKGFGTDEDALISILCTR 105
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRR 112
L A+KG GTDE +I+++C R
Sbjct: 429 LHDAIKGLGTDEDLLIEIICTR 450
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +1
Query: 127 LEIAETFKTNYGKDLISELKSELTGNLENVIVALMTP 237
+EI + +KT YGKDL+++LKSEL+GNLE ++A+M P
Sbjct: 20 VEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAMMEP 56
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEY 613
GE +WGTDES FN +L +RS+ QL+ F EY
Sbjct: 114 GEKKWGTDESRFNVVLASRSFPQLQATFNEY 144
Score = 36.3 bits (80), Expect = 0.026
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIR 344
K L + G GTDEE +I+ILCT SN G R
Sbjct: 63 KCLRRGMRGAGTDEETLIDILCTRSNQGNR 92
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 288 TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSL 443
T+E +I IL SN I Y+ +YGK L +DLK + SG+ + +++
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAM 53
Score = 35.1 bits (77), Expect = 0.060
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRR 112
LR+ M+G GTDE+ +ID+LC R
Sbjct: 65 LRRGMRGAGTDEETLIDILCTR 86
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GE +WGTDES+F IL RS QLR ++ Y+ + DI ++I E +G + AI
Sbjct: 414 GEKKWGTDESVFTKILTCRSDLQLRALYQAYQHVAKCDILETIDDELTGDYHDAVKAI 471
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 127 LEIAETFKTNYGKDLISELKSELTGNLENVIVALMTP 237
L IA++FK Y KDL++ELKSEL+G E+ IVAL+ P
Sbjct: 338 LAIAQSFKQQYDKDLVNELKSELSGKFEDAIVALLLP 374
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
++L A+ G G+DEEAIIE+L + + I+ ++Q Y K L ++LK + SG F+
Sbjct: 309 EKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDAI 368
Query: 435 VSLCM 449
V+L +
Sbjct: 369 VALLL 373
Score = 35.5 bits (78), Expect = 0.045
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVL 103
L+KAMKGFG+DE+AII+VL
Sbjct: 311 LKKAMKGFGSDEEAIIEVL 329
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYG 338
+ L+ A+ G+GT E +IE LCT SN G
Sbjct: 122 RSLYYAMKGLGTKEAQLIETLCTRSNTG 149
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 533 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
+G+DE +L + + +Q I ++ KD+ + +K E SG E ++A+
Sbjct: 318 FGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDAIVAL 371
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 44 TLRKAMKGFGTDEKAIIDVLCRR 112
+L AMKG GT E +I+ LC R
Sbjct: 123 SLYYAMKGLGTKEAQLIETLCTR 145
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 252 RKELHDAVSGIGTDEEA---IIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHF 422
+ E+HDA+ G T+ ++ +++ L ++YG + S + +L G S+E+ LKG +S H
Sbjct: 550 KSEVHDAIDGAVTENDSYRKVLDFLKEWASYGNKEYSEAWIRLDGISVEA-LKGKSSWH- 607
Query: 423 KRLC 434
R C
Sbjct: 608 -RFC 610
>SB_7583| Best HMM Match : PT (HMM E-Value=6.1)
Length = 501
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +1
Query: 52 QGYEGLRHR*EGYHRRALPPRHRASLEIAETFKTNYGKDLI--SELKSELTGNLENVIVA 225
QG EGLR R G H +P + A+ + ++ +D + LK + + +
Sbjct: 90 QGREGLRARAVGIHT-PVPESNSAAGYRSSCYRRYRRRDSARRAALKLYNQARPKQSLES 148
Query: 226 LMTP-LPHFYARSSTMLSQELEPTKKPSSRSCARFPTMVSVPYPHFTN--NCTARAW 387
+ P L +Y S T + EL P PS+ A + +VP H C A A+
Sbjct: 149 MRAPELSDYYIPSKTQKNAELAPALFPSATQLAACCDVAAVPALHLGGLFPCCAHAY 205
>SB_35708| Best HMM Match : WD40 (HMM E-Value=1.2)
Length = 179
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -1
Query: 538 SPLTFTSGGQASASALAEPSSMPWFSSRLAMHNDTHNLLKC 416
SPLT T +ASA+ + SS P +R+A+ N+T LKC
Sbjct: 22 SPLTRTRITRASANTNTDNSSSPITRTRIAIPNNTR--LKC 60
>SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 28.7 bits (61), Expect = 5.2
Identities = 32/111 (28%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Frame = +3
Query: 198 RQLGKCHRRIDDSPAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTIS------AF 359
R L +C +RI S P + V + D IE L NY I I AF
Sbjct: 782 RSLLQCRQRISQSRCPTNMRAGVRCVKKL-PDLVVNIEELGNDRNYRIDQIPLAYLSCAF 840
Query: 360 YEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDEGSAKADAEAW 512
E S D F R + +NR EN+G+D K+D W
Sbjct: 841 EENCLSASANRDWPQRHFNMFNRRLIRF--SNRIENRGLDHFKPKSDKSQW 889
>SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 242 PTSTQGAPRCCLRNWNRRRSHHRDP 316
P + PRCC +N N R H DP
Sbjct: 139 PFLYEPGPRCCNQNMNNRSKCHADP 163
>SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13)
Length = 405
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 541 RRINLQLHPYHSLLSAAETDLRRVRSFD-RKRH*GLDQERILW 666
R +NL L P H + +D ++ + D K GLD++ +LW
Sbjct: 12 RDVNLTLSPAHMMAKGRNSDKQKEKDKDAEKDKDGLDRKYLLW 54
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 462 ENQGIDEGSAKADAEAWPPLVKV-NGEP 542
+++G D G+ + + E WPP KV N +P
Sbjct: 758 DHEGHDNGTQEVEEEGWPPFKKVGNFDP 785
>SB_31687| Best HMM Match : DUF420 (HMM E-Value=6.3)
Length = 349
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 478 SMPWFSSRLAMHNDTHNLLKCPDVSPFKSDS 386
SMP FSS LA + D++N + P + K D+
Sbjct: 54 SMPHFSSILACYADSNNHVHAPKIKGGKKDA 84
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 137 RRPSRLTMART*LANSRVNSPATWKMSSSH**LPCPTSTQGAPRCCLRNWNRRRSHHRDP 316
R P +++R +S +S +W SSSH P+ AP R+HHR P
Sbjct: 782 RSPYGSSISRRYSQSSLSSSNTSWHHSSSHNIKELPSLLGSAPE---------RTHHRSP 832
Query: 317 VH 322
VH
Sbjct: 833 VH 834
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,951,646
Number of Sequences: 59808
Number of extensions: 468791
Number of successful extensions: 1674
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1673
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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