Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00911
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 86 3e-17
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 80 2e-15
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 80 2e-15
Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 38 0.010
Z81030-7|CAB02711.1| 366|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 3.4
U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 28 7.9
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 7.9
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 85.8 bits (203), Expect = 3e-17
Identities = 43/91 (47%), Positives = 57/91 (62%)
Frame = +3
Query: 231 DSPAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 410
D+PA K+LH A+ G+GT E +IEI+ + +N I+ + Y+ L+ K LE DL G+T
Sbjct: 220 DAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLIGET 279
Query: 411 SGHFKRLCVSLCMANRDENQGIDEGSAKADA 503
SGHFKRL VSLC RDE+ D A DA
Sbjct: 280 SGHFKRLLVSLCAGGRDESSQTDGLRANQDA 310
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/71 (42%), Positives = 49/71 (69%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 700
GE + GTDES FN+IL ++++ QLR +F EY+ + IE +I+ EFSG I G+LA+
Sbjct: 317 GEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLAVIA 376
Query: 701 CVKSKVGFFAE 733
++++ +FA+
Sbjct: 377 VIRNRPAYFAK 387
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
K LHD++ G+GT + +I + T + Y + I ++ LY SLE+ +KGD SG +K
Sbjct: 387 KLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENMIKGDCSGAYKEGL 446
Query: 435 VSLCMANR 458
++L NR
Sbjct: 447 IALVNGNR 454
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 261 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVS 440
L A+ G+G + +I ILC +N+ + IS ++ +YGK L +LKG+ G F+ L ++
Sbjct: 158 LRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILA 217
Query: 441 L 443
L
Sbjct: 218 L 218
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1
Query: 130 EIAETFKTNYGKDLISELKSELTGNLENVIVALM 231
EI++ FK YGKDLI ELK EL G+ E++I+ALM
Sbjct: 186 EISKAFKVMYGKDLIKELKGELHGDFEDLILALM 219
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GT ES+ I+ +R+ Q++Q+ Y+ L KD+E + E SG ++ ++++
Sbjct: 238 GTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLIGETSGHFKRLLVSL 290
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRR 112
LRKAMKG G + +I +LC+R
Sbjct: 158 LRKAMKGLGCNNSKVISILCQR 179
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
G + S SIL R+ Q ++I ++ + GKD+ +K E G E +LA+
Sbjct: 166 GCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILAL 218
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 85.8 bits (203), Expect = 3e-17
Identities = 43/91 (47%), Positives = 57/91 (62%)
Frame = +3
Query: 231 DSPAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 410
D+PA K+LH A+ G+GT E +IEI+ + +N I+ + Y+ L+ K LE DL G+T
Sbjct: 262 DAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLIGET 321
Query: 411 SGHFKRLCVSLCMANRDENQGIDEGSAKADA 503
SGHFKRL VSLC RDE+ D A DA
Sbjct: 322 SGHFKRLLVSLCAGGRDESSQTDGLRANQDA 352
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/71 (42%), Positives = 49/71 (69%)
Frame = +2
Query: 521 GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 700
GE + GTDES FN+IL ++++ QLR +F EY+ + IE +I+ EFSG I G+LA+
Sbjct: 359 GEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLAVIA 418
Query: 701 CVKSKVGFFAE 733
++++ +FA+
Sbjct: 419 VIRNRPAYFAK 429
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
K LHD++ G+GT + +I + T + Y + I ++ LY SLE+ +KGD SG +K
Sbjct: 429 KLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENMIKGDCSGAYKEGL 488
Query: 435 VSLCMANR 458
++L NR
Sbjct: 489 IALVNGNR 496
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 261 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVS 440
L A+ G+G + +I ILC +N+ + IS ++ +YGK L +LKG+ G F+ L ++
Sbjct: 200 LRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILA 259
Query: 441 L 443
L
Sbjct: 260 L 260
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1
Query: 130 EIAETFKTNYGKDLISELKSELTGNLENVIVALM 231
EI++ FK YGKDLI ELK EL G+ E++I+ALM
Sbjct: 228 EISKAFKVMYGKDLIKELKGELHGDFEDLILALM 261
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GT ES+ I+ +R+ Q++Q+ Y+ L KD+E + E SG ++ ++++
Sbjct: 280 GTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLIGETSGHFKRLLVSL 332
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRR 112
LRKAMKG G + +I +LC+R
Sbjct: 200 LRKAMKGLGCNNSKVISILCQR 221
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
G + S SIL R+ Q ++I ++ + GKD+ +K E G E +LA+
Sbjct: 208 GCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILAL 260
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
K+L A+ G+GTDE +IEILC+ + +R I YE+ YGK+LE+D+ GDTSG F+ L
Sbjct: 91 KQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLL 150
Query: 435 VSLCMANRDENQGIDEGSAKADA 503
VSL ++D + ++ AK DA
Sbjct: 151 VSLVTGSKDGSHDTNDAQAKDDA 173
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +2
Query: 542 DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVG 721
D + F IL T++ QLR++FA ++ L G IE SI+KEFSG ++K L I + K
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 722 FFAE 733
FFA+
Sbjct: 248 FFAQ 251
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
++LH ++ G+GT + +I ++ T S + I A +++LY KSL +KGDTSG ++
Sbjct: 251 QQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDAL 310
Query: 435 VSLCMAN 455
+S+ N
Sbjct: 311 LSIINGN 317
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 130 EIAETFKTNYGKDLISELKSELTGNLENVIVALM-TPLPH 246
++ E +K YGKD+I L + +G+LE I ALM TPL +
Sbjct: 49 QLREPYKLKYGKDIIQALDKKFSGDLEKAIFALMETPLDY 88
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GTDE++ IL +R+ QLR I YE GK +E I + SG ++++
Sbjct: 101 GTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVSL 153
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GT ++ +++TRS L I AE++ L K + D++K + SG+ +L+I
Sbjct: 261 GTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLSI 313
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
G +++ N ++ + S Q +Q+ Y+ GKDI ++ K+FSG +EK + A+
Sbjct: 30 GEKDAVVN-VITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFAL 81
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRRGIVQ 124
L+ AMKG GTDE +I++LC R + Q
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQ 118
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
K+L A+ G+GTDE +IEILC+ + +R I YE+ YGK+LE+D+ GDTSG F+ L
Sbjct: 91 KQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLL 150
Query: 435 VSLCMANRDENQGIDEGSAKADA 503
VSL ++D + ++ AK DA
Sbjct: 151 VSLVTGSKDGSHDTNDAQAKDDA 173
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +2
Query: 542 DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVG 721
D + F IL T++ QLR++FA ++ L G IE SI+KEFSG ++K L I + K
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 722 FFAE 733
FFA+
Sbjct: 248 FFAQ 251
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +3
Query: 255 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 434
++LH ++ G+GT + +I ++ T S + I A +++LY KSL +KGDTSG ++
Sbjct: 251 QQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDAL 310
Query: 435 VSLCMAN 455
+S+ N
Sbjct: 311 LSIINGN 317
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 130 EIAETFKTNYGKDLISELKSELTGNLENVIVALM-TPLPH 246
++ E +K YGKD+I L + +G+LE I ALM TPL +
Sbjct: 49 QLREPYKLKYGKDIIQALDKKFSGDLEKAIFALMETPLDY 88
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GTDE++ IL +R+ QLR I YE GK +E I + SG ++++
Sbjct: 101 GTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVSL 153
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
GT ++ +++TRS L I AE++ L K + D++K + SG+ +L+I
Sbjct: 261 GTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLSI 313
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
G +++ N ++ + S Q +Q+ Y+ GKDI ++ K+FSG +EK + A+
Sbjct: 30 GEKDAVVN-VITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFAL 81
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 47 LRKAMKGFGTDEKAIIDVLCRRGIVQ 124
L+ AMKG GTDE +I++LC R + Q
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQ 118
>Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical
protein C28A5.3 protein.
Length = 317
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/77 (41%), Positives = 45/77 (58%)
Frame = +3
Query: 234 SPAPLLRKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 413
+P L EL+ +V G+GT+E+ +IEIL T +N I Y Y KSLE + DTS
Sbjct: 82 TPTKLDVTELNRSVKGLGTNEKNLIEILTTRTNEEIEAAKNTYFMTYSKSLEDAISADTS 141
Query: 414 GHFKRLCVSLCMANRDE 464
G F+RL + + A R+E
Sbjct: 142 GDFRRLLIVILQAKREE 158
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +2
Query: 563 ILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 694
IL++ + Q + I Y+ GKD+ED IKK FSG E ++A+
Sbjct: 36 ILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKAFSGDFEDFLVAL 79
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 133 IAETFKTNYGKDLISELKSELTGNLENVIVALM-TP 237
I +KT YGKDL E+K +G+ E+ +VAL+ TP
Sbjct: 48 IRTPYKTRYGKDLEDEIKKAFSGDFEDFLVALLQTP 83
Score = 34.7 bits (76), Expect = 0.069
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 303 IIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSL 443
I+EIL +++N + I Y+ YGK LE ++K SG F+ V+L
Sbjct: 33 ILEILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKAFSGDFEDFLVAL 79
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 536 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 715
GT+E IL TR+ +++ Y K +ED+I + SG + ++ I + + +
Sbjct: 99 GTNEKNLIEILTTRTNEEIEAAKNTYFMTYSKSLEDAISADTSGDFRRLLIVILQAKREE 158
Query: 716 VGF 724
GF
Sbjct: 159 GGF 161
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 563 ILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAEA 736
I T + ++++ E E +GK+ + I KE SG + +L++ + ++K +FA +
Sbjct: 192 IFATCNGAHIQKVIEEVERQSGKEFQKLIDKELSGDFKNLVLSLIETSRNKPRYFANS 249
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 261 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 425
+H A G+GT ++ +I IL + S + I ++ L+GK L +K + ++
Sbjct: 250 IHLATKGMGTRDKDLIRILVSRSENDLVIIEHEFQTLFGKPLTQLIKEECKAEYR 304
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 237 PAPLLRKE-LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 413
PAP + ++ ++S D IEI CT S +R + Y+ Y KSL+ DL
Sbjct: 97 PAPNYDAQCVYKSLSNRHGDRSVAIEIACTRSPRQMRALRDTYQIDYRKSLDKDLTVKVE 156
Query: 414 GHFKRLCVSLCMANRDENQGI 476
G ++ L NR+E G+
Sbjct: 157 GVVGKMMHLLLCNNREEGLGV 177
>Z81030-7|CAB02711.1| 366|Caenorhabditis elegans Hypothetical
protein C01G10.9 protein.
Length = 366
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 539 TDESIFNSILITRSYQQLRQIFAEYEALT 625
TDE + N IL+ +YQ+L F + E LT
Sbjct: 147 TDEKLQNRILVWNAYQELLSAFPDKEKLT 175
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 282 IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMAN 455
+G D I + LS+ R +AF E+ G S+E ++ G C+SLC N
Sbjct: 286 VGKDYYEPICVAADLSSSTCRQQAAF-ERFIGSSIEGEVVASAQGVTISDCISLCFQN 342
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 250 YARSSTMLSQELEPT-KKPSSR-SCARFPTMVSVPYPHFTNNCTARAWNRT*KATRRDTS 423
Y ST + +EPT ++P++R + + T + P TARA +R T
Sbjct: 252 YVAPSTTTQRYIEPTTQRPTTRRATTKRITTTTTAAPTTPRLTTARATTPLATTSRPTTP 311
Query: 424 RDCACRCAWPIAMKTRASMKAQLKPMLKP 510
R P+A A+ +A L P P
Sbjct: 312 SPTTPRATTPLATTPLATTRAPLPPSPPP 340
>U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical
protein F18A1.5 protein.
Length = 655
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 608 EYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 700
+Y AL DI+D IK+E +E ++A+ K
Sbjct: 72 QYNALMSADIDDQIKREVEHLVEGTIIALTK 102
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 186 E*THRQLGKCHRRIDDSPAPLLRKELHDAVSGIGTDEEAIIEILCTLSN 332
E +++GK ++D+ LRK+ +A G D I E+L TLSN
Sbjct: 140 EEAEKEIGKIKDQLDE-----LRKKFEEAQKGRAEDRLKIDELLVTLSN 183
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 186 E*THRQLGKCHRRIDDSPAPLLRKELHDAVSGIGTDEEAIIEILCTLSN 332
E +++GK ++D+ LRK+ +A G D I E+L TLSN
Sbjct: 140 EEAEKEIGKIKDQLDE-----LRKKFEEAQKGRAEDRLKIDELLVTLSN 183
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 186 E*THRQLGKCHRRIDDSPAPLLRKELHDAVSGIGTDEEAIIEILCTLSN 332
E +++GK ++D+ LRK+ +A G D I E+L TLSN
Sbjct: 140 EEAEKEIGKIKDQLDE-----LRKKFEEAQKGRAEDRLKIDELLVTLSN 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,775,323
Number of Sequences: 27780
Number of extensions: 333333
Number of successful extensions: 1079
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -