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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00910
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...   156   2e-38
U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...   156   2e-38
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...   156   2e-38
U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation fact...    52   4e-07
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...    41   8e-04
AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditi...    36   0.028
D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation fact...    34   0.11 
D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation fact...    34   0.11 
AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongatio...    34   0.11 
AF039711-8|ABS19466.1|  766|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z78200-2|CAB01578.1|  588|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation f...    28   5.7  
U41007-15|AAQ01538.1|  564|Caenorhabditis elegans Kinesin-like p...    28   5.7  
U41007-14|AAA82277.1|  690|Caenorhabditis elegans Kinesin-like p...    28   5.7  
AB023577-1|BAB82459.1|  690|Caenorhabditis elegans Kinesin like ...    28   5.7  
AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial...    28   5.7  
U97191-1|AAB52432.1|  805|Caenorhabditis elegans Nuclear pore co...    28   7.5  
AL132862-18|CAB70230.2|  481|Caenorhabditis elegans Hypothetical...    28   7.5  
AF067219-15|AAC17023.2|  802|Caenorhabditis elegans Hypothetical...    27   9.9  
AF016655-9|AAK31440.1|  348|Caenorhabditis elegans Hypothetical ...    27   9.9  

>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score =  156 bits (378), Expect = 2e-38
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = +2

Query: 2   YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 181
           YNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPT
Sbjct: 149 YNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPT 208

Query: 182 DKPLRLPLQDVYKIGGIGTVPVGRVK 259
           D+PLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 209 DRPLRLPLQDVYKIGGIGTVPVGRVE 234



 Score =  139 bits (336), Expect = 2e-33
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = +1

Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
           ETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V  
Sbjct: 234 ETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCS 293

Query: 436 DSKNNPPKGAADFTAQVIVLNHPGQ 510
           DSK +P K A  F AQVI++NHPGQ
Sbjct: 294 DSKQDPAKEARTFHAQVIIMNHPGQ 318



 Score =  114 bits (275), Expect = 5e-26
 Identities = 51/65 (78%), Positives = 56/65 (86%)
 Frame = +3

Query: 510 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCV 689
           ISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCV
Sbjct: 319 ISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCV 378

Query: 690 ESFQE 704
           ESF +
Sbjct: 379 ESFTD 383


>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score =  156 bits (378), Expect = 2e-38
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = +2

Query: 2   YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 181
           YNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPT
Sbjct: 183 YNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPT 242

Query: 182 DKPLRLPLQDVYKIGGIGTVPVGRVK 259
           D+PLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 243 DRPLRLPLQDVYKIGGIGTVPVGRVE 268



 Score =  139 bits (336), Expect = 2e-33
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = +1

Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
           ETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V  
Sbjct: 268 ETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCS 327

Query: 436 DSKNNPPKGAADFTAQVIVLNHPGQ 510
           DSK +P K A  F AQVI++NHPGQ
Sbjct: 328 DSKQDPAKEARTFHAQVIIMNHPGQ 352



 Score =  114 bits (275), Expect = 5e-26
 Identities = 51/65 (78%), Positives = 56/65 (86%)
 Frame = +3

Query: 510 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCV 689
           ISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCV
Sbjct: 353 ISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCV 412

Query: 690 ESFQE 704
           ESF +
Sbjct: 413 ESFTD 417


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score =  156 bits (378), Expect = 2e-38
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = +2

Query: 2   YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 181
           YNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPT
Sbjct: 183 YNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPT 242

Query: 182 DKPLRLPLQDVYKIGGIGTVPVGRVK 259
           D+PLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 243 DRPLRLPLQDVYKIGGIGTVPVGRVE 268



 Score =  139 bits (336), Expect = 2e-33
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = +1

Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
           ETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V  
Sbjct: 268 ETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCS 327

Query: 436 DSKNNPPKGAADFTAQVIVLNHPGQ 510
           DSK +P K A  F AQVI++NHPGQ
Sbjct: 328 DSKQDPAKEARTFHAQVIIMNHPGQ 352



 Score =  114 bits (275), Expect = 5e-26
 Identities = 51/65 (78%), Positives = 56/65 (86%)
 Frame = +3

Query: 510 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCV 689
           ISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCV
Sbjct: 353 ISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCV 412

Query: 690 ESFQE 704
           ESF +
Sbjct: 413 ESFTD 417


>U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation factor
           protein 4, isoformc protein.
          Length = 267

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 30/70 (42%), Positives = 35/70 (50%)
 Frame = +3

Query: 39  DGTETTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKTYT 218
           D TETTC      C GSRDG  + +K  L E  S +L  PS H  A LT   VF  +  T
Sbjct: 178 DSTETTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLTDHSVFHSRMCT 237

Query: 219 KSVVLVPCPS 248
           +S  L P  S
Sbjct: 238 RSEELEPSQS 247


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/79 (31%), Positives = 45/79 (56%)
 Frame = +2

Query: 23  FVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLP 202
           FVP+SG+ G+N+++   ++ W+            DG CL+E +D+ + P  P+D PLR+ 
Sbjct: 350 FVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLRIG 396

Query: 203 LQDVYKIGGIGTVPVGRVK 259
           + DV K+     V  G+++
Sbjct: 397 ISDVLKVASNQLVVSGKIE 415


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/79 (31%), Positives = 45/79 (56%)
 Frame = +2

Query: 23  FVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLP 202
           FVP+SG+ G+N+++   ++ W+            DG CL+E +D+ + P  P+D PLR+ 
Sbjct: 368 FVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLRIG 414

Query: 203 LQDVYKIGGIGTVPVGRVK 259
           + DV K+     V  G+++
Sbjct: 415 ISDVLKVASNQLVVSGKIE 433


>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 23/82 (28%), Positives = 40/82 (48%)
 Frame = +1

Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
           E+G ++ G  +V  P     +V  +       +  V GDN+ F +K +   EL+ G++  
Sbjct: 360 ESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVAGDNIKFKLKGIEENELQGGFII- 418

Query: 436 DSKNNPPKGAADFTAQVIVLNH 501
            S ++  K    F A+V+VL H
Sbjct: 419 CSPDSLAKTGRVFDAEVLVLEH 440



 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 128 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVKLVC 268
           G C IE +D +LP   R  + P+R  + + Y    +GTV +G+++  C
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKY--SEMGTVIIGKMESGC 363


>AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditis
           gtp-binding proteinprotein 1 protein.
          Length = 613

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +1

Query: 259 TGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGY 426
           +G ++   I++  P +    +   +KS+      +     G +  F +K +  K++R+G 
Sbjct: 396 SGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVKCGQSASFALKKIPKKDVRKGM 455

Query: 427 VAGDSKNNPPKGAADFTAQVIVLNHP 504
           V  D K  P      F A+++VL+HP
Sbjct: 456 VLVDPKVKPVASMV-FEAEILVLHHP 480


>D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 495

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = +1

Query: 256 ETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRR 420
           E G+LK G  I +       T VKSV    E   + + +A PGD +G  ++ +  K++RR
Sbjct: 274 ERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRR 333

Query: 421 GYV 429
           G V
Sbjct: 334 GCV 336


>D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 496

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = +1

Query: 256 ETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRR 420
           E G+LK G  I +       T VKSV    E   + + +A PGD +G  ++ +  K++RR
Sbjct: 275 ERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRR 334

Query: 421 GYV 429
           G V
Sbjct: 335 GCV 337


>AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 1 protein.
          Length = 496

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = +1

Query: 256 ETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRR 420
           E G+LK G  I +       T VKSV    E   + + +A PGD +G  ++ +  K++RR
Sbjct: 275 ERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRR 334

Query: 421 GYV 429
           G V
Sbjct: 335 GCV 337


>AF039711-8|ABS19466.1|  766|Caenorhabditis elegans Hypothetical
           protein F49D11.10 protein.
          Length = 766

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +1

Query: 238 RARRQSETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 396
           R R +S     KPGTI  F P  ITTE K     H  L+  + GD     +++
Sbjct: 349 RLRPRSIVMNAKPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397


>Z78200-2|CAB01578.1|  588|Caenorhabditis elegans Hypothetical
           protein T04H1.2 protein.
          Length = 588

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = +1

Query: 262 GVLKPGTIVVFAPANITT----EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 429
           G L  G  V+  P    T     V S+    +A+    PG+    ++       LRRG V
Sbjct: 427 GQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVGCVNPGEAASISLNLPDGVSLRRGMV 486

Query: 430 AGDSKNNPPKGAADFTAQVIVLNH 501
             +  + PP    +FTA +++L H
Sbjct: 487 LAEIDHQPPV-CYEFTANLLLLCH 509


>U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 2 protein.
          Length = 439

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +2

Query: 80  PWFKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 250
           P  +G  +   EG+ D  C   LI+ALD++  P R       +P+     I G GTV VG
Sbjct: 201 PVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVG 259

Query: 251 RVK 259
            ++
Sbjct: 260 TLE 262


>U41007-15|AAQ01538.1|  564|Caenorhabditis elegans Kinesin-like
           protein protein 10,isoform b protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 534 LDCHTAHIACKFAEIKEKVDRRTGKSTE 617
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


>U41007-14|AAA82277.1|  690|Caenorhabditis elegans Kinesin-like
           protein protein 10,isoform a protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 534 LDCHTAHIACKFAEIKEKVDRRTGKSTE 617
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


>AB023577-1|BAB82459.1|  690|Caenorhabditis elegans Kinesin like
           protein protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 534 LDCHTAHIACKFAEIKEKVDRRTGKSTE 617
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


>AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial
           elongation factorTu homologue protein.
          Length = 439

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +2

Query: 80  PWFKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 250
           P  +G  +   EG+ D  C   LI+ALD++  P R       +P+     I G GTV VG
Sbjct: 201 PVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVG 259

Query: 251 RVK 259
            ++
Sbjct: 260 TLE 262


>U97191-1|AAB52432.1|  805|Caenorhabditis elegans Nuclear pore
           complex protein protein11 protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 485 T*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTAS 354
           T A  +AAP GGLF  +  T P     T   F    T +P TA+
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAA 511


>AL132862-18|CAB70230.2|  481|Caenorhabditis elegans Hypothetical
           protein Y73F8A.24 protein.
          Length = 481

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
 Frame = -3

Query: 357 FLESFVVHLHRFDFSSDVGGGKDNNGTWFQHTSFTLPTGTVPIPPI----LYTSCRGRRR 190
           FL   + HL   +   DV   K +NG     T+F +   T  +  +    L+T    R +
Sbjct: 283 FLTQLLTHLATNETIDDVSAEKVSNGKVIVETNFRVYAYTSSLLQLAIIALFTEMTYRFQ 342

Query: 189 GLSVGRAGGRMASRASMRHFPSA---LPSLRSTCHP 91
            +SVG    R + R +++H  +A   +  LR+  HP
Sbjct: 343 DMSVGMI-TRESVRGALQHGITAAQIISFLRANAHP 377


>AF067219-15|AAC17023.2|  802|Caenorhabditis elegans Hypothetical
           protein R12E2.2 protein.
          Length = 802

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 567 ICRQCGQCGNPILVCNRLRLPRMVKHNDL 481
           +C QC       L+C+ L +P  VK NDL
Sbjct: 338 VCSQCSVGKVSNLICHILPIPTRVKKNDL 366


>AF016655-9|AAK31440.1|  348|Caenorhabditis elegans Hypothetical
           protein C17F4.5 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 428 LLVTPKTTHLRVLQILQLKSLCLTILGNLKRLHTSI 535
           LL+ P +  L+  + L++K+LCLTI  N+  +  S+
Sbjct: 112 LLLIPNSEVLKFPESLKVKALCLTIQSNVASVMGSL 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,906,571
Number of Sequences: 27780
Number of extensions: 448396
Number of successful extensions: 1403
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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