Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00910
(704 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 144 7e-35
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 144 7e-35
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 144 7e-35
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 144 7e-35
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-... 89 4e-18
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 44 1e-04
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 41 0.001
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 39 0.003
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 36 0.026
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 0.98
At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containi... 29 3.0
At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containi... 29 3.0
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 29 4.0
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.0
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1... 29 4.0
At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing prote... 28 5.2
At3g05990.1 68416.m00684 leucine-rich repeat family protein cont... 28 5.2
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 6.9
At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP glucosyl... 27 9.2
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ... 27 9.2
At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UD... 27 9.2
At1g01060.2 68414.m00007 myb family transcription factor contain... 27 9.2
At1g01060.1 68414.m00006 myb family transcription factor contain... 27 9.2
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 144 bits (348), Expect = 7e-35
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
ETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA
Sbjct: 256 ETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVAS 315
Query: 436 DSKNNPPKGAADFTAQVIVLNHPGQ 510
+SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 316 NSKDDPAKGAANFTSQVIIMNHPGQ 340
Score = 105 bits (253), Expect = 2e-23
Identities = 53/86 (61%), Positives = 61/86 (70%)
Frame = +2
Query: 2 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 181
YNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPS 230
Query: 182 DKPLRLPLQDVYKIGGIGTVPVGRVK 259
DKPLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 231 DKPLRLPLQDVYKIGGIGTVPVGRVE 256
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +3
Query: 510 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCV 689
I NGY PVLDCHT+HIA KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ V
Sbjct: 341 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 400
Query: 690 ESFQE 704
E+F E
Sbjct: 401 ETFSE 405
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 144 bits (348), Expect = 7e-35
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
ETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA
Sbjct: 256 ETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVAS 315
Query: 436 DSKNNPPKGAADFTAQVIVLNHPGQ 510
+SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 316 NSKDDPAKGAANFTSQVIIMNHPGQ 340
Score = 105 bits (253), Expect = 2e-23
Identities = 53/86 (61%), Positives = 61/86 (70%)
Frame = +2
Query: 2 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 181
YNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPS 230
Query: 182 DKPLRLPLQDVYKIGGIGTVPVGRVK 259
DKPLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 231 DKPLRLPLQDVYKIGGIGTVPVGRVE 256
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +3
Query: 510 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCV 689
I NGY PVLDCHT+HIA KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ V
Sbjct: 341 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 400
Query: 690 ESFQE 704
E+F E
Sbjct: 401 ETFSE 405
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 144 bits (348), Expect = 7e-35
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
ETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA
Sbjct: 256 ETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVAS 315
Query: 436 DSKNNPPKGAADFTAQVIVLNHPGQ 510
+SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 316 NSKDDPAKGAANFTSQVIIMNHPGQ 340
Score = 105 bits (253), Expect = 2e-23
Identities = 53/86 (61%), Positives = 61/86 (70%)
Frame = +2
Query: 2 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 181
YNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPS 230
Query: 182 DKPLRLPLQDVYKIGGIGTVPVGRVK 259
DKPLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 231 DKPLRLPLQDVYKIGGIGTVPVGRVE 256
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +3
Query: 510 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCV 689
I NGY PVLDCHT+HIA KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ V
Sbjct: 341 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 400
Query: 690 ESFQE 704
E+F E
Sbjct: 401 ETFSE 405
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 144 bits (348), Expect = 7e-35
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
ETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA
Sbjct: 256 ETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVAS 315
Query: 436 DSKNNPPKGAADFTAQVIVLNHPGQ 510
+SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 316 NSKDDPAKGAANFTSQVIIMNHPGQ 340
Score = 105 bits (253), Expect = 2e-23
Identities = 53/86 (61%), Positives = 61/86 (70%)
Frame = +2
Query: 2 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 181
YNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPS 230
Query: 182 DKPLRLPLQDVYKIGGIGTVPVGRVK 259
DKPLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 231 DKPLRLPLQDVYKIGGIGTVPVGRVE 256
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +3
Query: 510 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCV 689
I NGY PVLDCHT+HIA KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ V
Sbjct: 341 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 400
Query: 690 ESFQE 704
E+F E
Sbjct: 401 ETFSE 405
>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
domain-containing protein similar to SP|P13905
Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
thaliana}; contains Pfam profile PF03143: Elongation
factor Tu C-terminal domain
Length = 104
Score = 88.6 bits (210), Expect = 4e-18
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +3
Query: 510 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCV 689
I NGYTPVLDCHT+HIA KF+EI K+D RTG E PK +K+ +AAI+N+ P+KP+ V
Sbjct: 7 IKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTPTKPMVV 66
Query: 690 ESF 698
E++
Sbjct: 67 EAY 69
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +2
Query: 137 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVK 259
L++A+D +P P R DKP +P++DV+ I G GTV GR++
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIE 290
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 307 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQV 486
+ + V VEM + L GDNVG ++ + ++++RG V +K K F A++
Sbjct: 312 LKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVI--AKPGSCKTYKKFEAEI 369
Query: 487 IVL 495
VL
Sbjct: 370 YVL 372
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 519 GYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESF 698
GY +L H C+ E+K ++D +T K + +K+G A + + + +C+E F
Sbjct: 440 GYKAILHIHAVVEECEIIELKSQIDLKTRKPMKKKVLFVKNGAAVVCRIQVTNSICIEKF 499
Query: 699 QE 704
+
Sbjct: 500 SD 501
Score = 37.5 bits (83), Expect = 0.009
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 17 VAFVPISGWHGDNMLEPSTK--MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 190
V F+PISG G NM + + PW W G E LD+I P R + P
Sbjct: 283 VVFLPISGLMGKNMDQRMGQEICPW---W---------SGPSFFEVLDSIEIPPRDPNGP 330
Query: 191 LRLPLQDVYKIGGIGTVPVGRVK 259
R+P+ D +K +GTV +G+V+
Sbjct: 331 FRMPIIDKFK--DMGTVVMGKVE 351
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +1
Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 435
E+G ++ G +V P +V ++ + ++ A PG+N+ + + +++ G+V
Sbjct: 351 ESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFVL- 409
Query: 436 DSKNNPPKGAADFTAQVIVL 495
S NP +F AQ+ +L
Sbjct: 410 SSIVNPVPAVTEFVAQLQIL 429
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 137 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVK 259
L++A+D +P P R T+ P L ++DV+ I G GTV GRV+
Sbjct: 269 LMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVE 310
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 256 ETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 429
E G +K G V T V VEM + L EA+ GDNVG ++ + +++RG V
Sbjct: 310 ERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMV 369
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 543 HTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQE 704
H A A ++ +D +TG+ T+ +P+ + + +A++ + P+CVE+F E
Sbjct: 586 HHAKEAATVVKLVAMLDPKTGQPTKKSPRCLTAKQSAMLEVSLQNPVCVETFSE 639
Score = 34.3 bits (75), Expect = 0.080
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 256 ETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 429
E G ++PG+ V+ P+ ++S+E +A A GDNV ++ + ++ G V
Sbjct: 491 EAGAVRPGSKVMVMPSGDQGTIRSLERDSQACTIARAGDNVALALQGIDANQVMAGDV 548
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 128 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTV 241
G CL++A+D++ P R KPL +P+ D + G V
Sbjct: 447 GPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQV 484
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 110 KEGKADGKCLIEALDAILPPARPTDKP 190
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +3
Query: 33 FLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 212
FL+G+ T+ C+ S D K+ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 213 YTKSVV 230
TK VV
Sbjct: 77 -TKPVV 81
>At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +3
Query: 33 FLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 212
FL+G+ T+ C+ S D K+ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 213 YTKSVV 230
TK VV
Sbjct: 77 -TKPVV 81
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 365 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 264
G + WR W S DLT ++++ A ++ G T
Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIKT 211
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 59 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 157
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At1g27900.1 68414.m03419 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 700
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -1
Query: 386 LKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTP 261
L+P+LS + C+S LT V ML+ A+TT++P + P
Sbjct: 428 LEPSLSRTLIEANETGCLSQALTVVAMLS-AETTLLPARSKP 468
>At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing protein
similar to cell death suppressor protein lls1 from Zea
mays [gi:1935909], Rieske iron-sulfur protein Tic55 from
Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske
[2Fe-2S] domain
Length = 536
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 564 KFAEIKEKVDRRTGKSTEVNPKSI 635
+F + KEK+DR GK E+N K +
Sbjct: 258 RFPKPKEKIDREGGKPLEINVKKL 281
>At3g05990.1 68416.m00684 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leaf
senescence-associated receptor-like protein kinase
[Phaseolus vulgaris] gi|9837280|gb|AAG00510
Length = 517
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 280 YLV-STHQFHSADGHGTNTTDFVYVLQGKTQGLVSGAGRWQDGIESFNE 137
Y++ +T+ + +G GT F ++ G G+V+ + DG+ S+ E
Sbjct: 98 YMIRTTYYYGGVNGKGTPPPVFDQIVDGTLWGIVNTTADYADGLASYYE 146
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 240 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 136
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP
glucosyltransferase (SUS2) nearly identical to SP|Q00917
Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP
glucosyltransferase) {Arabidopsis thaliana} (SUS2);
contains Pfam profile: PF00862 sucrose synthase
Length = 807
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 309 DVGGGKDNNGTWFQHTSFTLP 247
++ G K+N G + HT+FT+P
Sbjct: 482 EIAGSKNNVGQYESHTAFTMP 502
>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 264 CVETRYHCCLCPRQHHY*SQIC 329
C R+HC LC R+ +Y S C
Sbjct: 73 CSNLRFHCDLCGRRTNYLSYYC 94
>At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UDP
glucosyltransferase, putative similar to sucrose
synthase GI:6682841 from [Citrus unshiu]
Length = 942
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 309 DVGGGKDNNGTWFQHTSFTLP 247
++ G KD G + HT+FT+P
Sbjct: 489 EIAGSKDRPGQYESHTAFTMP 509
>At1g01060.2 68414.m00007 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 110 KEGKADGKCLIEALDAILPPARPTDKP 190
KE + G + +ALD +PP RP KP
Sbjct: 74 KEAEVKGIPVCQALDIEIPPPRPKRKP 100
>At1g01060.1 68414.m00006 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 110 KEGKADGKCLIEALDAILPPARPTDKP 190
KE + G + +ALD +PP RP KP
Sbjct: 74 KEAEVKGIPVCQALDIEIPPPRPKRKP 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,142,235
Number of Sequences: 28952
Number of extensions: 421732
Number of successful extensions: 1359
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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