Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00909
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29613-3|AAC47062.2|  483|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z68004-3|CAA91983.2|  380|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U42436-2|AAL02470.2|  552|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas...    28   5.8  
Z83117-2|CAE17876.1|  142|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z77661-5|CAB01182.1|  343|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U29613-3|AAC47062.2|  483|Caenorhabditis elegans Hypothetical
           protein K02A6.3a protein.
          Length = 483

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
 Frame = +3

Query: 330 TSLFLARYSVGVGGRVDR-----VNI*SGVPKCSK**LTARGEKNDSYAIQIISQLITNL 494
           T  F+A   VG GG++       +N   G+   S   L    ++ D +   ++ +    L
Sbjct: 145 TGGFIAGKDVGTGGQILHSLKTVLNYLHGLKSLSLVDLQLTHDEADDFLSTLLEKFYEKL 204

Query: 495 FELSLIQAALFWQFLLTLPEFNKSRKLLI 581
             LSL+   L+ + LL +  F K RKLL+
Sbjct: 205 TYLSLLNVTLYPKPLLQVGCFLKLRKLLV 233


>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
           protein Y53F4B.9 protein.
          Length = 1168

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 443 LSASRQLSFRAFRNTRLNVHTVDPPAYTHRI--TRKEQASSRSGNEPKPHYDI 291
           L    Q S R+ R+ RLN   ++PP  +  +    +E++SS+      P YD+
Sbjct: 306 LEEPEQKSKRSRRSLRLNPDAIEPPVKSCDLLEDEREESSSKKRENHDPGYDL 358


>Z68004-3|CAA91983.2|  380|Caenorhabditis elegans Hypothetical
           protein F47B10.3 protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 492 LFELSLIQAALFWQFLL 542
           LF ++LIQAALFWQ ++
Sbjct: 146 LFFITLIQAALFWQIMI 162


>U42436-2|AAL02470.2|  552|Caenorhabditis elegans Hypothetical
           protein C49H3.6a protein.
          Length = 552

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 395 LNVHTVDPPAYTHRITRKEQASSRSGNEPKPHYDIYRNNVSARSDT 258
           +NV T  PPAY+  + ++  +  R  N   P   I R+ ++    T
Sbjct: 466 MNVVTASPPAYSTAMAKRSSSLPREANNNPPGAPIRRSTMNGGMHT 511


>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
            protein 11 protein.
          Length = 1032

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +1

Query: 445  RMIHMQFKLYPN*SQIFLNFH*YKLHSFGNFY*HYRNLTKVESYSFVFLPAIRDLSLKKN 624
            ++++M   LY N   I   F  YK+ + G+ Y     L +V SY  +    +   SL+  
Sbjct: 843  QVVNMLNNLYTNFDTIIDKFDCYKVETIGDAYMFVSGLPEVNSY--LHAGEVASASLELL 900

Query: 625  DKIMVQTVILVP 660
            D I   TV   P
Sbjct: 901  DSIKTFTVSHCP 912


>Z83117-2|CAE17876.1|  142|Caenorhabditis elegans Hypothetical
           protein M04C7.4 protein.
          Length = 142

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -3

Query: 392 NVHTVDPPAYTHRITRKEQASSRSGNEPKPHYDIYRNN 279
           NVH    PAYT   TRK    + +  E KP  D Y N+
Sbjct: 33  NVHM---PAYTQSSTRKLAFGTAATEEHKPLDDFYNNS 67


>Z77661-5|CAB01182.1|  343|Caenorhabditis elegans Hypothetical
           protein F40G12.6 protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 323 SGNEPKPHYDIYRNNVSARSDTISSNR 243
           SGN+ K  YDI  NN++ + +T+ S +
Sbjct: 112 SGNDSKCDYDITTNNLTKKRETLVSGK 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,652,591
Number of Sequences: 27780
Number of extensions: 294041
Number of successful extensions: 648
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)