Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00908
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 102 2e-22
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 100 2e-21
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 100 2e-21
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 70 2e-12
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 66 2e-11
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 64 9e-11
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 62 3e-10
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 61 9e-10
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 61 9e-10
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 58 5e-09
11_06_0455 + 23792326-23792442,23793720-23794125,23794474-237945... 31 0.81
11_04_0359 + 16735204-16735676,16736597-16736647,16736860-167369... 30 1.9
02_03_0074 + 14781763-14784191,14784888-14784978,14785180-147852... 29 3.3
10_08_0625 + 19362303-19363853 29 4.3
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 28 5.7
05_01_0395 + 3118480-3119097,3119699-3119989,3120063-3120114,312... 28 5.7
02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643... 28 5.7
02_01_0188 - 1262908-1262970,1264185-1264790,1265290-1266030 28 5.7
01_06_0208 - 27540077-27540992,27541310-27541497 28 5.7
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 28 7.6
06_01_0462 - 3285667-3288123 28 7.6
04_01_0063 - 630345-633743 28 7.6
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 102 bits (245), Expect = 2e-22
Identities = 48/87 (55%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 SMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILG 430
+MLG RK VNLPG+ VDLP ++EKDK D+L +GV +DMI SF+R G+ L +R +LG
Sbjct: 154 AMLGERKNVNLPGVIVDLPTLTEKDKVDILQWGVPNKIDMIALSFVRKGSDLMLVRSVLG 213
Query: 431 EKGKNIKIISKIENHQGMVNLDEIIAN 511
E K+I ++SK+EN +G+ N+DEIIAN
Sbjct: 214 EHAKSILLMSKVENQEGVANVDEIIAN 240
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 657
SD MVARGDLG+EIP EK+F AQK MI +CN GKPV+ ATQMLESM+
Sbjct: 241 SDAFMVARGDLGMEIPIEKIFYAQKVMIHKCNIHGKPVVTATQMLESMI 289
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 PEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFI 182
PEIRTG L+ G ++LK+G+ I +T DY KG+ + I + Y + +KPG+ I
Sbjct: 72 PEIRTGFLKDG--KPIQLKQGKEITITI--DYSIKGDENLISMSYHKLAIDLKPGSTILC 127
Query: 183 DDGLISIICQSVSAD--TLTCTIEN 251
DG I++ S + + C EN
Sbjct: 128 ADGTITLTVLSCDCEQGLVRCRCEN 152
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 SMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILG 430
+MLG RK NLPGI VDLP ++EKDK D+L +GV +DMI SF+R G+ L +R +LG
Sbjct: 171 AMLGERKNCNLPGIVVDLPTLTEKDKEDILGWGVPNDIDMIALSFVRKGSDLVTVRQLLG 230
Query: 431 EKGKNIKIISKIENHQGMVNLDEII 505
+ K IK++SK+EN +G+VN DEI+
Sbjct: 231 QHAKRIKLMSKVENQEGVVNFDEIL 255
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 657
+D MVARGDLG+EIP EK+FLAQK MI +CN GKPV+ ATQMLESM+
Sbjct: 258 TDAFMVARGDLGMEIPVEKIFLAQKMMIYKCNLAGKPVVTATQMLESMI 306
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 PEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFI 182
PEIRTG L+ G ++L KG+ +LT ++DY+ KG+ + I + YK + VKPGN I
Sbjct: 89 PEIRTGFLKDG--KPIKLTKGQ--ELTVTTDYEIKGDENMITMSYKKLPVDVKPGNVILC 144
Query: 183 DDGLISIICQSV--SADTLTCTIEN 251
DG IS+ S A T+ C EN
Sbjct: 145 ADGTISLTVLSCDPKAGTVRCRCEN 169
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/86 (52%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 SMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILG 430
+MLG RK VNLPG+ VDLP ++EKDK D+L +GV +DMI SF+R G+ L E+R +LG
Sbjct: 263 AMLGERKNVNLPGVIVDLPTLTEKDKEDILKWGVPNKIDMIALSFVRKGSDLVEVRKVLG 322
Query: 431 EKGKNIKIISKIENHQGMVNLDEIIA 508
+ K+I ++SK+EN +G+ N D+I+A
Sbjct: 323 KHAKSIMLMSKVENQEGVANFDDILA 348
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 657
SD MVARGDLG+EIP EK+F AQK MI +CN GKPV+ ATQMLESM+
Sbjct: 350 SDAFMVARGDLGMEIPIEKIFYAQKVMIFKCNIQGKPVVTATQMLESMI 398
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +3
Query: 3 PEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFI 182
PEIRTG L+ G V+LKKG+ I T S+DY KG+ + I + YK + +KPG+ I
Sbjct: 181 PEIRTGFLKDG--KPVQLKKGQEI--TVSTDYSIKGDDNMISMSYKKLAVDLKPGSVILC 236
Query: 183 DDGLISI 203
DG I++
Sbjct: 237 ADGTITL 243
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +2
Query: 260 LGSRKGVNLPGIPVDLPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKG 439
L SR+ +N+ G LP+++EKD D+ FGVE GVD SF+++ +HE++ L
Sbjct: 250 LKSRRHLNVRGKSATLPSITEKDWEDIKFGVENGVDFYAVSFVKDAKVIHELKDYLKSAN 309
Query: 440 KNIKIISKIENHQGMVNLDEIIA 508
+I +I KIE+ + NL IIA
Sbjct: 310 ADIHVIPKIESADSIPNLQSIIA 332
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 657
SDG MVARGDLG E+P E+V L Q+ ++ C + KPVI AT MLESM+
Sbjct: 334 SDGAMVARGDLGAELPIEEVPLLQEEIVRTCRSMQKPVIVATNMLESMI 382
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/84 (28%), Positives = 46/84 (54%)
Frame = +3
Query: 3 PEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFI 182
PE+R+G + + L++G+ T K DT+ V+Y + N V+ G+ + +
Sbjct: 171 PEVRSGDVP----EPIMLEEGQEFNFTIKRGVSTK---DTVSVNYDDFINDVEVGDILLV 223
Query: 183 DDGLISIICQSVSADTLTCTIENG 254
D G++S+ +S +ADT+ C + +G
Sbjct: 224 DGGMMSLAVKSKTADTVKCEVVDG 247
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/49 (55%), Positives = 42/49 (85%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 657
+DG++++RGDLGI++PPE VF++QKT I +CN GKPVI T++++SM+
Sbjct: 272 ADGVIISRGDLGIDLPPEDVFISQKTAIKKCNLAGKPVI-ITRVVDSMI 319
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 299 VDLPAVSEKDKSDL-LFGVEQGVDMIFASFIRNGAALHEIRGILGEKG-KNIKIISKIEN 472
V LP +S+ DK + +G+ VD+I S R+ + E+R L G ++ +I +K+EN
Sbjct: 199 VSLPTLSDYDKEVISTWGLHNSVDIISLSHTRSAEDVRELRSFLQSHGLQDTQIYAKVEN 258
Query: 473 HQGMVNLDEII 505
+G+ + DEI+
Sbjct: 259 TEGLDHFDEIL 269
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 657
SDG+MVARGDLG++IP E++ Q+ ++ C R+ KPVI A+Q+LESMV
Sbjct: 922 SDGVMVARGDLGVQIPLEQIPAIQEAIVDLCRRLNKPVIVASQLLESMV 970
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 305 LPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKG-KNIKIISKIENHQG 481
LP +S KD +D+ FG+ +GVD I SF+++ + ++ L K ++IKI +K+E+ +
Sbjct: 852 LPTLSAKDWADIEFGIAEGVDCIALSFVKDANDIKYLKTYLSRKSLEHIKIFAKVESLES 911
Query: 482 MVNLDEII 505
+ NL +II
Sbjct: 912 LKNLKDII 919
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +2
Query: 260 LGSRKGVNLPGIPVDLPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKG 439
L SR+ +N+ G LP++++KD D+ FGVE VD SF+++ +HE++ L
Sbjct: 285 LKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVKDAQVVHELKDYLRSSN 344
Query: 440 KNIKIISKIENHQGMVNLDEII 505
+I +I KIE+ + NL II
Sbjct: 345 ADIHVIVKIESADSIPNLHSII 366
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 657
SDG MVARGDLG E+P E+V L Q+ +I C +GK VI AT MLESM+
Sbjct: 369 SDGAMVARGDLGAELPIEEVPLLQEEIIRMCRSMGKAVIVATNMLESMI 417
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESM 654
+DGI+++RG+LGI++PPEKVFL QK+ + +CN GKP + T++++SM
Sbjct: 245 ADGIILSRGNLGIDLPPEKVFLFQKSALHKCNMAGKPAV-VTRVVDSM 291
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +2
Query: 254 SMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILG 430
++ GS ++ I +DLP +S++DK + +G +D + S+ R+ + + R L
Sbjct: 156 TLAGSLFTLHCSQIHIDLPTLSDEDKEVIRKWGAPNKIDFLSLSYTRHVEDVRQAREFLS 215
Query: 431 EKG--KNIKIISKIENHQGMVNLDEII 505
+ G +I +KIEN +G+ N DEI+
Sbjct: 216 KLGDLSQTQIFAKIENVEGLNNFDEIL 242
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +3
Query: 42 AEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLIS------- 200
A + L++ T+ LT D ++ ++ + +++ + VKPG+ IF+ L +
Sbjct: 78 ASISLEENGTVILTP--DQGQEASSQVLPINFAGLAKAVKPGDTIFVGQYLFTGSETTSV 135
Query: 201 -IICQSVSADTLTCTIEN 251
+ + D + C I+N
Sbjct: 136 WLEVSQIKGDDVVCVIKN 153
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESM 654
+DGI+++RG+LGI++PPEKVFL QK+ + +CN GKP + T++++SM
Sbjct: 245 ADGIILSRGNLGIDLPPEKVFLFQKSALHKCNMAGKPAV-VTRVVDSM 291
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +2
Query: 254 SMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILG 430
++ GS ++ I +DLP +S++DK + +G +D + S+ R+ + + R L
Sbjct: 156 TLAGSLFTLHCSQIHIDLPTLSDEDKEVIRRWGAPNKIDFLSLSYTRHAEDVRQAREFLS 215
Query: 431 EKG--KNIKIISKIENHQGMVNLDEII 505
+ G +I +KIEN +G+ + DEI+
Sbjct: 216 KLGDLSQTQIFAKIENVEGLNHFDEIL 242
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +3
Query: 42 AEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLIS------- 200
A + L+ T+ LT D ++ +++ + +++ + +KPG IF+ L +
Sbjct: 78 AAISLEANGTVVLTP--DQGQEASSELLPINFSGLAKALKPGATIFVGQYLFTGSETTSV 135
Query: 201 -IICQSVSADTLTCTIEN 251
+ V D + C I+N
Sbjct: 136 WLEVSEVKGDDVVCVIKN 153
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +1
Query: 511 SDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 657
SDG MVARGD+G +IP E+V Q+ ++ C ++ KPVI A+Q+LESM+
Sbjct: 343 SDGAMVARGDMGAQIPLEQVPSVQQKIVKLCRQLNKPVIVASQLLESMI 391
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +2
Query: 305 LPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILG--EKGKNIKIISKIENHQ 478
LP +S KD D+ FG+ +GVD I SF+++ ++ ++ + +G +I +I+KIE+
Sbjct: 272 LPTISSKDWLDIDFGISEGVDFIAVSFVKSAEVINHLKSYIAARSRGSDIAVIAKIESID 331
Query: 479 GMVNLDEII 505
+ NL+EII
Sbjct: 332 SLKNLEEII 340
>11_06_0455 +
23792326-23792442,23793720-23794125,23794474-23794583,
23795063-23795125,23795478-23795504
Length = 240
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 396 PLRMNDAKIISTPCSTPKSRSDLSFSETAGRSTGMPGRLTPFRDP 262
PLR ND + + TP ST KS S ++ RS+ G P ++P
Sbjct: 109 PLRANDDEEMETPSSTHKS-SKTNYDTKMKRSSSTHGEKLPTKEP 152
>11_04_0359 +
16735204-16735676,16736597-16736647,16736860-16736934,
16737011-16737062,16737147-16737280,16737397-16737511,
16737665-16737751,16737855-16737903,16738351-16738435,
16738641-16738715,16738848-16739029,16739905-16739969
Length = 480
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 390 ATAPRCTRFAASSAKRGRTSRSSP 461
+T PRCTR AA+ +R R + +SP
Sbjct: 59 STRPRCTRTAATCPRRSRLATASP 82
>02_03_0074 +
14781763-14784191,14784888-14784978,14785180-14785230,
14785882-14785947,14786509-14786610
Length = 912
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 290 GIPVDLPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIE 469
G+PV PA S+ + LL V + AS N LH GI+ ++ K+ K + +E
Sbjct: 365 GVPVPAPAPSDYAEEVLL----DAVASVSASGSSND--LHHCAGIVADRFKS-KALRDLE 417
Query: 470 N-HQGMVNL 493
N H MVNL
Sbjct: 418 NKHHWMVNL 426
>10_08_0625 + 19362303-19363853
Length = 516
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 39 SAEVELKK--GETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQ 212
+A E KK GET K T E DT+ +D K + + GNR DD +I + +
Sbjct: 256 NARREYKKHGGETTKTTNKETTLEHSYVDTL-LDIK----LPEDGNRALTDDEIIKLCSE 310
Query: 213 SVSADTLT 236
++A T T
Sbjct: 311 FLNAGTDT 318
>05_05_0136 -
22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 282 TCPAYPWTYPQSPRRTSRTCSSASNKALI*FSRHSSAT 395
TC Y + YP+S +RTC L F+RH T
Sbjct: 526 TCFCYAFDYPRSDAAETRTCMIGKGN-LFTFARHVKTT 562
>05_01_0395 +
3118480-3119097,3119699-3119989,3120063-3120114,
3120395-3120546
Length = 370
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 405 SAAPLRMNDAKIISTPCSTPKSRSDLSFSETAGRSTGM 292
+A PL + I++TP S+P SRS + + G + G+
Sbjct: 254 TALPLSSLTSPILTTPMSSPTSRSGVGREKVGGDTLGV 291
>02_05_1170 +
34663853-34663928,34664038-34664078,34664317-34664386,
34664499-34664647,34664784-34664879,34665406-34665476,
34665637-34665698,34665778-34665841,34665950-34666034,
34666129-34666255,34666381-34666454,34666539-34666599,
34666683-34666771,34666897-34667206,34667763-34667815,
34668299-34668370,34668648-34668914,34669015-34669047,
34669163-34669245,34669522-34669594,34669834-34670170,
34670302-34670633,34670816-34671135,34671261-34671612,
34671691-34671906
Length = 1170
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Frame = +3
Query: 312 QSPRRTSRTCSSASNKALI*FSRHSSATAP------RCTR-FAASSAKRGRTSRSSPRLK 470
+ PR +SRT SAS +A+ SR S+ P R +R F++S ++ T R +P +
Sbjct: 368 ERPRTSSRT-GSASRRAVASSSRPGSSVEPMEQQYSRTSRLFSSSGSRPSSTQRVNPSVG 426
Query: 471 ITREWSI 491
TR S+
Sbjct: 427 ETRATSL 433
>02_01_0188 - 1262908-1262970,1264185-1264790,1265290-1266030
Length = 469
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 219 SADTLTCTIENGVCSDPGKASTCPAYPWTYPQSPRRTSRTCSSAS 353
++ T CT+ N + P + STC A YP S R R + A+
Sbjct: 52 ASGTANCTVTNAYGAFPDR-STCRAAAAAYPASERELLRVVAGAA 95
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 353 RRRRAGPTCPSRRLRVG 303
RRRRAG CP+R+ R G
Sbjct: 84 RRRRAGAACPARQQRCG 100
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 456 MILMFFPFSPRMPRISCSAAPLRMNDAKII 367
++ +FFP +P PR CS R DA++I
Sbjct: 215 ILFIFFPVTPESPRYLCSVG--RTMDARVI 242
>06_01_0462 - 3285667-3288123
Length = 818
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 66 ETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGL 194
E K S+Y E G+ D + DY N+ V+K R I G+
Sbjct: 598 EKTKRLLVSEYSENGSLDRLLFDYHNLFPVLKWSQRYNIALGV 640
>04_01_0063 - 630345-633743
Length = 1132
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 468 SILEMILMFFPFSPRMPRISCSAAPLRMNDAKIISTPCSTPKSRSDLSFSETA 310
S+ ++ L+ FP RMPR+ + L + K + CS + F ETA
Sbjct: 791 SLRQLKLVVFPKLKRMPRLPGTLKNLHIQQCKALVMTCSEDVNMIRSLFVETA 843
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,948,921
Number of Sequences: 37544
Number of extensions: 409634
Number of successful extensions: 1441
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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