Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00907
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    26   1.5  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   3.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   3.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   6.0  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   6.0  

>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = -1

Query: 557 PARRCTSGTKCSSSAC--GCGARQR 489
           P + C +  KC+S  C  GCG   R
Sbjct: 2   PCKTCVADCKCTSPNCGAGCGCESR 26


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 525 FLECLRLWCSATARSEATALS 463
           F++C+ +WCS       T LS
Sbjct: 271 FIQCVMIWCSLVLYVAVTGLS 291


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 495  ATARSEATALSRTTVSSTAANVSRGGRRQCANSPP 391
            A  R ++ +LS  ++ S  +  S GGR      PP
Sbjct: 988  AVVRPQSLSLSMNSMGSDNSEQSSGGRLSSGGGPP 1022


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 566 QSPPARRCTSGTKC 525
           Q PP + CTSG  C
Sbjct: 81  QGPPGKNCTSGGCC 94


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -3

Query: 525 FLECLRLWCSATARSEATALSRTTVS 448
           F++C  +WCS       T  S T  +
Sbjct: 290 FIQCTMIWCSLILYIAVTGFSSTVAN 315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,882
Number of Sequences: 2352
Number of extensions: 14928
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)