Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00906
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.2  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 484 LILLFNLFYNFKSLE*QINNLPVLSSL 404
           + LLF LFY +K+++  I +L  LS L
Sbjct: 13  VFLLFYLFYCYKTIKQHIYSLISLSYL 39


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 484 LILLFNLFYNFKSLE*QINNLPVLSSL 404
           + LLF LFY +K+++  I +L  LS L
Sbjct: 13  VFLLFYLFYCYKTIKQHIYSLISLSYL 39


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +3

Query: 378 LCTGLVHNYRELKTGKLFICYSSDXXXXXXXXXXIRGTINLQRKASAELTSLDEVISNSL 557
           LCT ++  +  LK GKL    S+D           R  I   +KA+  L +L  +   S 
Sbjct: 115 LCTHIIFAFGWLKKGKLSSFESNDETKDGKVGLYER--IQKLKKANPSLKTLLAIGGWSF 172

Query: 558 KGKELEEFNRIHYGR 602
             ++ ++     Y R
Sbjct: 173 GTQKFKDMASTRYAR 187


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 628 VPLLPKKPLAMDL 666
           +PLLPK PL + L
Sbjct: 45  MPLLPKTPLPLTL 57


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 603 FFHSEFY*TLLVLYPLMNLILLHPNL*VLQK 511
           FFH      ++V+Y L N++L    L +L K
Sbjct: 278 FFHLSDVRYVMVVYLLKNVVLYGLELFILAK 308


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 628 VPLLPKKPLAMDL 666
           +PLLPK PL + L
Sbjct: 1   MPLLPKTPLPLTL 13


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,639
Number of Sequences: 336
Number of extensions: 2729
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)