Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00905
         (738 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g68020.2 68414.m07771 glycosyl transferase family 20 protein ...    31   0.60 
At1g68020.1 68414.m07770 glycosyl transferase family 20 protein ...    31   0.60 
At4g38360.2 68417.m05424 expressed protein contains Pfam profile...    30   1.8  
At5g51690.1 68418.m06409 1-aminocyclopropane-1-carboxylate synth...    27   9.8  
At3g13784.1 68416.m01741 beta-fructosidase, putative / beta-fruc...    27   9.8  

>At1g68020.2 68414.m07771 glycosyl transferase family 20 protein /
           trehalose-phosphatase family protein similar to
           SP|Q00764 Alpha,alpha-trehalose-phosphate synthase
           [UDP-forming] 56 kDa subunit (EC 2.4.1.15)
           (Trehalose-6-phosphate synthase) {Saccharomyces
           cerevisiae}; contains Pfam profile: PF02358
           trehalose-phosphatase
          Length = 860

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 188 FVHTARRYYRLNDLVRSSDRHAGLHGRRRCWEVDQT*SFR 307
           +V T    Y     ++  +R  G HGRRRCW +    SFR
Sbjct: 538 YVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFR 577


>At1g68020.1 68414.m07770 glycosyl transferase family 20 protein /
           trehalose-phosphatase family protein similar to
           SP|Q00764 Alpha,alpha-trehalose-phosphate synthase
           [UDP-forming] 56 kDa subunit (EC 2.4.1.15)
           (Trehalose-6-phosphate synthase) {Saccharomyces
           cerevisiae}; contains Pfam profile: PF02358
           trehalose-phosphatase
          Length = 700

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 188 FVHTARRYYRLNDLVRSSDRHAGLHGRRRCWEVDQT*SFR 307
           +V T    Y     ++  +R  G HGRRRCW +    SFR
Sbjct: 538 YVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFR 577


>At4g38360.2 68417.m05424 expressed protein contains Pfam profile
           PF03619: Domain of unknown function
          Length = 485

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 123 DNCKPQSPARRSFSGLPGPLGQGEHADSFSVARVRPRTSK 4
           D+C   SP+RR   G+  PL  G  +DS  V R +    K
Sbjct: 415 DSCMSSSPSRRVIRGIDDPLLNGSFSDS-GVTRTKKHRRK 453


>At5g51690.1 68418.m06409 1-aminocyclopropane-1-carboxylate
           synthase, putative / ACC synthase, putative similar to
           ACC synthases from Solanum tuberosum [GI:520958],
           Triticum aestivum [GI:1173638]
          Length = 495

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 329 PCYDFYFL*MIKFGQLPNNADGREAPRVGPKTSLNHSIGSSDGR 198
           PC  FYFL +    + P  +D  + PR   +T+L  S G+S GR
Sbjct: 24  PCCLFYFLQLYLKRRRPPPSDPTDLPRTFSRTNL-FSRGNSIGR 66


>At3g13784.1 68416.m01741 beta-fructosidase, putative /
           beta-fructofuranosidase, putative / cell wall invertase,
           putative similar to beta-fructofuranosidase GI:402740
           from [Arabidopsis thaliana]
          Length = 569

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 22  HARYTEGISMFSL--A*RPGQPAETPSCWGLGFAIIPHKRGI 141
           HA  T+ I+  +L  A RP +P++   CW     I+P+ + +
Sbjct: 87  HATSTDLINWITLSPAIRPSRPSDINGCWSGSVTILPNGKPV 128


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,588,941
Number of Sequences: 28952
Number of extensions: 264776
Number of successful extensions: 580
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)