Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00904
         (671 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499FC0 Cluster: zinc finger protein; n=1; Entamo...    36   0.89 
UniRef50_Q9EN15 Cluster: AMV033; n=1; Amsacta moorei entomopoxvi...    36   0.89 
UniRef50_Q17N89 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  

>UniRef50_UPI0000499FC0 Cluster: zinc finger protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: zinc finger protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 198

 Score = 35.9 bits (79), Expect = 0.89
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = -1

Query: 608 ITVFFSFEKLTLRCRAIWALNWVTTNVLVILQT*Q*LSPLIYSMSEWLISSLKQKQTLSE 429
           I + F F+KL + CR I +L ++  N+ ++ +  Q L  ++Y +      S  +K   S 
Sbjct: 118 IFLLFQFKKLHIECRLI-SLGFLFGNISILFEFYQNLKTIVYQLQFNFTCSEYKKYLNSR 176

Query: 428 FSHYQHHY 405
             H Q+HY
Sbjct: 177 RMHCQYHY 184


>UniRef50_Q9EN15 Cluster: AMV033; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV033 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 429

 Score = 35.9 bits (79), Expect = 0.89
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = -3

Query: 645 NIIKWNISTYN*N---YCFFFVRETHFEMSRHMGTELGNYKCFSHSADVAMIITVD 487
           NIIK+NISTY  +   YC+F +     ++  H+ +E+ NY  F+    + ++   D
Sbjct: 178 NIIKYNISTYYDSIMFYCYFDIDINCNKIEHHISSEINNYTTFTKFVFLKILFVPD 233


>UniRef50_Q17N89 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 508

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 457 LLMSHSLIE*INGDNHCYVCRMTKTFVVTQFSAHMARH 570
           LL+SH ++  + GD HC  C +T      +F+AH+A+H
Sbjct: 195 LLLSHLMLTHVEGDYHCEECDITFR-ASPEFNAHLAKH 231


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,863,809
Number of Sequences: 1657284
Number of extensions: 11816467
Number of successful extensions: 24613
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24608
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)