Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00904
(671 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.5
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.0
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 4.6
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNY 105
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNY 105
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 425 SHYQHHY*RNY*IGFLSYITFLFVLSISL 339
SH + Y +N IGF+ +TFL + S+ +
Sbjct: 866 SHLRELYLQNNLIGFIGNLTFLPLRSLEI 894
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 467 LISSLKQKQTLSEFSHYQHHY*RNY 393
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 41 MRGIPTDWGRAAVGLNR 91
++GIP WGRA NR
Sbjct: 544 VKGIPCSWGRAINVANR 560
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 571 LKVSFSNEKKTVILIIRTYIP 633
L+VSF+ ++ T +I+ Y+P
Sbjct: 234 LQVSFNLQRHTGYFLIQVYVP 254
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,230
Number of Sequences: 438
Number of extensions: 3707
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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