Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00903
         (773 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    26   1.1  
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    26   1.1  
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    26   1.1  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.6  

>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +2

Query: 398 GTYEPNDDECLN---PWRDDTEE 457
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +2

Query: 398 GTYEPNDDECLN---PWRDDTEE 457
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +2

Query: 398 GTYEPNDDECLN---PWRDDTEE 457
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 658 KVQMHEDPISFTLEFYFAPNEYFTNTVLTKEY 753
           ++Q H DP+  +    F P  YFT  +    Y
Sbjct: 21  RIQGHSDPLGHSTPGSFDPQGYFTPPIANVGY 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,793
Number of Sequences: 2352
Number of extensions: 14515
Number of successful extensions: 66
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)