Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00901
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.49 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.49 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   1.1  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 465 FINFP*SRKTYFTTLLSHNKSIGDVLKTITQDTNCLENKFKKSIKRNR 608
           F +F     T+  TLL  +K +    + I  DT C EN      KR++
Sbjct: 83  FADFAYLETTWICTLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHK 130


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 465 FINFP*SRKTYFTTLLSHNKSIGDVLKTITQDTNCLENKFKKSIKRNR 608
           F +F     T+  TLL  +K +    + I  DT C EN      KR++
Sbjct: 101 FADFAYLETTWICTLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHK 148


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/57 (24%), Positives = 26/57 (45%)
 Frame = +1

Query: 277 KEILVNIYKKSNILQNVENIKSYLFKELKALVNKDLNYEDLQSKSFFSLGGTSFLAV 447
           +E+   +     I Q   N K  + + +  ++N   NY D  +  FFS+  T+ L +
Sbjct: 276 EEVKTTLLLAYKIRQVFPNEKKNISEFINVVLN---NYPDFSAAGFFSINKTTLLQI 329


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 104 CSCVWLQTPLLLIVYFSAETL 166
           CS +WL+ P  L+  F+ + L
Sbjct: 311 CSTMWLKDPSWLVNAFNVDPL 331


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 520 LCDNNVVKYVFLLQGKL 470
           LCDN   +Y+  L+GK+
Sbjct: 11  LCDNFCHRYISCLKGKM 27


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 520 LCDNNVVKYVFLLQGKL 470
           LCDN   +Y+  L+GK+
Sbjct: 167 LCDNFCHRYISCLKGKM 183


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 427 GTSFLAVTICNKLSLTFPEVGKHILPH 507
           G    A  ICNK  +    + KH+  H
Sbjct: 371 GEKRFACPICNKRFMRSDHLAKHVKTH 397


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,314
Number of Sequences: 336
Number of extensions: 3934
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)