Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00901
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            30   0.066
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   5.8  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.6  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   7.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
 Frame = +1

Query: 232  DQSGYFAYNAHGKTSKEILVN--------IYKKSNILQNVENIKSYLFKELKALVNKDLN 387
            D+  +F Y++HGK  +E LVN        I K + + ++ + I+S+ + E+++  N D+ 
Sbjct: 1970 DRVVHFTYSSHGKVMREALVNLTRESCYQIVKTNEVPESTDLIESF-YGEVES--NPDVR 2026

Query: 388  YEDLQS 405
            Y   QS
Sbjct: 2027 YRSQQS 2032


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 508 YYHIIKVLVMF*KLLPKTQTA*KINSKRVSKE-TDLQAAMVKIAYLTK 648
           YYHII +L  F  L     TA    SK  +KE TD+ A     A LT+
Sbjct: 236 YYHIIAMLNGFCSLWFVNCTAFGTASKAFAKELTDVLATERPAAKLTE 283


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 573 ENKFKKSIKRNRSTSSHGENSLSYKKG 653
           ++   K I  +R+ S+ GEN ++ KKG
Sbjct: 56  QSSHTKCIPISRNASAIGENGVALKKG 82


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 41  GHKINLHSIESTVMQCPRVRSCSCVW 118
           GHKI+   I + ++ C R  +  CV+
Sbjct: 345 GHKIDCFGIGTHLVTCQRQPALGCVY 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,243
Number of Sequences: 2352
Number of extensions: 13933
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)