Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00899
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024350-1|ABC86412.1|  268|Drosophila melanogaster IP09446p pro...   121   1e-27
AE014134-1854|AAF52926.1|  268|Drosophila melanogaster CG13139-P...   121   1e-27
AY094730-1|AAM11083.1| 1372|Drosophila melanogaster GH25780p pro...    30   3.3  
AE014297-134|AAO41500.1| 1372|Drosophila melanogaster CG31531-PC...    30   3.3  
AE014297-133|AAF52105.2| 1372|Drosophila melanogaster CG31531-PB...    30   3.3  
AE014297-132|AAF52104.2| 1372|Drosophila melanogaster CG31531-PA...    30   3.3  

>BT024350-1|ABC86412.1|  268|Drosophila melanogaster IP09446p
           protein.
          Length = 268

 Score =  121 bits (291), Expect = 1e-27
 Identities = 59/84 (70%), Positives = 67/84 (79%)
 Frame = +3

Query: 276 TLPGGACFGSFQNCPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAG 455
           TLPGG+CFGSFQNCPTKAEARRS+AKIALMNSVFNEH SRRISD FI+KAV +AR SF G
Sbjct: 68  TLPGGSCFGSFQNCPTKAEARRSSAKIALMNSVFNEHPSRRISDEFIQKAVQDARTSFKG 127

Query: 456 DTSNPHQDPSAGIAAFRLCWKRTK 527
            TS  ++   +GI AFR   +  K
Sbjct: 128 -TSQINEGTESGIGAFRFMLEANK 150



 Score =  107 bits (256), Expect = 2e-23
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +2

Query: 509 MLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRERQCSRQEVVAHYSARALDD 667
           MLEANKGRTMLEFQELMTVFQLLHWNGSL+AMRER CSRQEVVAHYS R+LDD
Sbjct: 145 MLEANKGRTMLEFQELMTVFQLLHWNGSLKAMRERHCSRQEVVAHYSNRSLDD 197



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +1

Query: 52  MVYPEPSRWGXXXXXXXXXYDDV-YRADGILSTVNVVQALQEFWQVKXXXXXXXXXXXLV 228
           MVYPE   W          Y+D  YR       VNVV+ALQEFWQ+K           LV
Sbjct: 1   MVYPEEPFW--VLPTVTGFYEDRDYR-------VNVVEALQEFWQMKQSRGAELKNGALV 51

Query: 229 IY*SVPAAHRP 261
           IY S+P+  +P
Sbjct: 52  IYESIPSNSQP 62


>AE014134-1854|AAF52926.1|  268|Drosophila melanogaster CG13139-PA
           protein.
          Length = 268

 Score =  121 bits (291), Expect = 1e-27
 Identities = 59/84 (70%), Positives = 67/84 (79%)
 Frame = +3

Query: 276 TLPGGACFGSFQNCPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAG 455
           TLPGG+CFGSFQNCPTKAEARRS+AKIALMNSVFNEH SRRISD FI+KAV +AR SF G
Sbjct: 68  TLPGGSCFGSFQNCPTKAEARRSSAKIALMNSVFNEHPSRRISDEFIQKAVQDARTSFKG 127

Query: 456 DTSNPHQDPSAGIAAFRLCWKRTK 527
            TS  ++   +GI AFR   +  K
Sbjct: 128 -TSQINEGTESGIGAFRFMLEANK 150



 Score =  107 bits (256), Expect = 2e-23
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +2

Query: 509 MLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRERQCSRQEVVAHYSARALDD 667
           MLEANKGRTMLEFQELMTVFQLLHWNGSL+AMRER CSRQEVVAHYS R+LDD
Sbjct: 145 MLEANKGRTMLEFQELMTVFQLLHWNGSLKAMRERHCSRQEVVAHYSNRSLDD 197



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +1

Query: 52  MVYPEPSRWGXXXXXXXXXYDDV-YRADGILSTVNVVQALQEFWQVKXXXXXXXXXXXLV 228
           MVYPE   W          Y+D  YR       VNVV+ALQEFWQ+K           LV
Sbjct: 1   MVYPEEPFW--VLPTVTGFYEDRDYR-------VNVVEALQEFWQMKQSRGAELKNGALV 51

Query: 229 IY*SVPAAHRP 261
           IY S+P+  +P
Sbjct: 52  IYESIPSNSQP 62


>AY094730-1|AAM11083.1| 1372|Drosophila melanogaster GH25780p
           protein.
          Length = 1372

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 339 RSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSN 467
           R  AK+A + +V+NE E+  +SD  I  + A  ++S +GD  N
Sbjct: 161 RGRAKLASL-AVYNEDETNDLSDLGIGTSSASGKSSLSGDYDN 202


>AE014297-134|AAO41500.1| 1372|Drosophila melanogaster CG31531-PC,
           isoform C protein.
          Length = 1372

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 339 RSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSN 467
           R  AK+A + +V+NE E+  +SD  I  + A  ++S +GD  N
Sbjct: 161 RGRAKLASL-AVYNEDETNDLSDLGIGTSSASGKSSLSGDYDN 202


>AE014297-133|AAF52105.2| 1372|Drosophila melanogaster CG31531-PB,
           isoform B protein.
          Length = 1372

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 339 RSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSN 467
           R  AK+A + +V+NE E+  +SD  I  + A  ++S +GD  N
Sbjct: 161 RGRAKLASL-AVYNEDETNDLSDLGIGTSSASGKSSLSGDYDN 202


>AE014297-132|AAF52104.2| 1372|Drosophila melanogaster CG31531-PA,
           isoform A protein.
          Length = 1372

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 339 RSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSN 467
           R  AK+A + +V+NE E+  +SD  I  + A  ++S +GD  N
Sbjct: 161 RGRAKLASL-AVYNEDETNDLSDLGIGTSSASGKSSLSGDYDN 202


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,256,069
Number of Sequences: 53049
Number of extensions: 406993
Number of successful extensions: 1041
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)