Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00898
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.4  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.9  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   5.9  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   5.9  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   7.7  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 476 CLNGKTRPGLEKITTGSRYSK*AVFSHHCSSQFE*CSA 363
           C NG  R     + +  R +K  +FS+ CS   E C A
Sbjct: 739 CNNGSLR----SVESAERAAKYDIFSNECSDLLENCEA 772


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = -2

Query: 602  HV*RIFSHH-FYWYFITINQCFVISSCQQCFGSYNNCSFLVLNC 474
            H+ ++ S H F+  ++ IN       C+ C G   N    +  C
Sbjct: 982  HLAQVLSGHGFFREYLAINGFTESPDCRSCAGVPENAHHAIFEC 1025


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 638 YSACSENFLILRHV*RIFSHHFYWYFITINQCFVISS 528
           Y  C E ++ +    +I     Y++F  I  C +ISS
Sbjct: 211 YQCCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISS 247


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 638 YSACSENFLILRHV*RIFSHHFYWYFITINQCFVISS 528
           Y  C E ++ +    +I     Y++F  I  C +ISS
Sbjct: 211 YQCCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISS 247


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 91  KYNECLQRIFIRTLYLLPSNNKQLCFCQ 174
           K N  +++IF+ TL   P  NKQ  + +
Sbjct: 65  KTNAHIEKIFLITLNKNPQKNKQFVYVE 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,585
Number of Sequences: 2352
Number of extensions: 16250
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)