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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00898
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68131-2|CAA92218.1|  614|Caenorhabditis elegans Hypothetical pr...    77   2e-14
Z81593-1|CAB04738.1|  608|Caenorhabditis elegans Hypothetical pr...    55   5e-08
L08970-1|AAA53660.1|  627|Caenorhabditis elegans choline acetylt...    46   2e-05
L08969-1|AAA53659.1|  627|Caenorhabditis elegans choline acetylt...    46   2e-05
AF036701-3|AAB88370.1|  627|Caenorhabditis elegans Abnormal chol...    46   2e-05
Z81107-11|CAJ90502.1|  476|Caenorhabditis elegans Hypothetical p...    44   2e-04
Z81107-10|CAB03233.1|  646|Caenorhabditis elegans Hypothetical p...    44   2e-04
Z73103-12|CAJ90500.1|  476|Caenorhabditis elegans Hypothetical p...    44   2e-04
Z73103-11|CAA97431.1|  646|Caenorhabditis elegans Hypothetical p...    44   2e-04
Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical pr...    44   2e-04
Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical pr...    41   8e-04
Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical p...    41   8e-04
AL110485-26|CAB60359.3|  779|Caenorhabditis elegans Hypothetical...    40   0.002
U64852-5|AAB04968.1|  746|Caenorhabditis elegans Hypothetical pr...    38   0.010
AF022981-11|AAG24207.1|  746|Caenorhabditis elegans Hypothetical...    37   0.014
AC024798-1|AAK29914.3|  722|Caenorhabditis elegans Hypothetical ...    33   0.17 
AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical ...    30   2.1  
AF125952-7|AAD14695.1|  352|Caenorhabditis elegans Seven tm rece...    29   4.7  
AC006722-13|AAK68415.2|  352|Caenorhabditis elegans Hypothetical...    29   4.7  
U80846-2|AAC70887.3|  516|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AF016438-9|AAB65891.2|  394|Caenorhabditis elegans Nuclear hormo...    28   8.3  
AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine re...    28   8.3  

>Z68131-2|CAA92218.1|  614|Caenorhabditis elegans Hypothetical
           protein B0395.3 protein.
          Length = 614

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 36/81 (44%), Positives = 51/81 (62%)
 Frame = +1

Query: 274 QEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSP 453
           +E++ TK +V DF+ +     KLQ LL+ RA+   NWL  WWLN AYL  R P+ + +SP
Sbjct: 48  KEFQETKQIVNDFVVKDLP--KLQELLQKRADALPNWLTPWWLNIAYLAARTPLPVVTSP 105

Query: 454 GLVFPFRQFNTRKEQLLYEPK 516
           G++FP   +NT + QL Y  K
Sbjct: 106 GVMFPKFDYNTEEGQLEYAAK 126



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
 Frame = +3

Query: 510 AKTLLAAADYKALIDGDKIPVEMMGKNPLDMSQYKKIFGTCRIPWEKRDKLSY-----NN 674
           AK   AA  +      +++  +M GK+PLDMSQY+ +FGT R+P    D++ Y       
Sbjct: 125 AKISQAAVHFYLRAKNNQLKPDMAGKSPLDMSQYQFLFGTTRVPKVGVDEIRYGCDYKEK 184

Query: 675 SKHVTVIHNNHIFHVDVWGEDDILLS 752
            +H+ VI N H+F V V   ++  LS
Sbjct: 185 LQHILVIRNGHLFRVQVLDSNEQPLS 210


>Z81593-1|CAB04738.1|  608|Caenorhabditis elegans Hypothetical
           protein T20B3.1 protein.
          Length = 608

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +1

Query: 331 GQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSPG 456
           G +LQS LENRA++H NWLE WW N AY E R+P+  + S G
Sbjct: 54  GAQLQSALENRAKNHKNWLEDWWYN-AYTEIREPLAPYVSFG 94


>L08970-1|AAA53660.1|  627|Caenorhabditis elegans choline
           acetyltransferase protein.
          Length = 627

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 20/56 (35%), Positives = 31/56 (55%)
 Frame = +1

Query: 340 LQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSPGLVFPFRQFNTRKEQLLY 507
           LQ  L   AE   NW  ++WL   Y+  R P  + S+PG +FP  +F T+++ + Y
Sbjct: 67  LQEQLLEIAEKSPNWATKFWLPEMYMRVRMPTPVNSNPGYIFPKVKFETKEDHIKY 122



 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 197 LPRLPVPKLETTLNKYLK 250
           LP+ PVP LE TL++YL+
Sbjct: 20  LPKPPVPSLEATLDRYLE 37


>L08969-1|AAA53659.1|  627|Caenorhabditis elegans choline
           acetyltransferase protein.
          Length = 627

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 20/56 (35%), Positives = 31/56 (55%)
 Frame = +1

Query: 340 LQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSPGLVFPFRQFNTRKEQLLY 507
           LQ  L   AE   NW  ++WL   Y+  R P  + S+PG +FP  +F T+++ + Y
Sbjct: 67  LQEQLLEIAEKSPNWATKFWLPEMYMRVRMPTPVNSNPGYIFPKVKFETKEDHIKY 122



 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 197 LPRLPVPKLETTLNKYLK 250
           LP+ PVP LE TL++YL+
Sbjct: 20  LPKPPVPSLEATLDRYLE 37


>AF036701-3|AAB88370.1|  627|Caenorhabditis elegans Abnormal choline
           acetyltransferaseprotein 1, isoform b protein.
          Length = 627

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 20/56 (35%), Positives = 31/56 (55%)
 Frame = +1

Query: 340 LQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSPGLVFPFRQFNTRKEQLLY 507
           LQ  L   AE   NW  ++WL   Y+  R P  + S+PG +FP  +F T+++ + Y
Sbjct: 67  LQEQLLEIAEKSPNWATKFWLPEMYMRVRMPTPVNSNPGYIFPKVKFETKEDHIKY 122



 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 197 LPRLPVPKLETTLNKYLK 250
           LP+ PVP LE TL++YL+
Sbjct: 20  LPKPPVPSLEATLDRYLE 37


>Z81107-11|CAJ90502.1|  476|Caenorhabditis elegans Hypothetical
           protein R07H5.2b protein.
          Length = 476

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 591 PLDMSQYKKIFGTCRIPWEKRDKLSYNNS-KHVTVIHNNHIFHVDVWGEDDILLSED 758
           PLDMSQYK +F   RIP +++D L  + S KH    +  H + V ++ +D  LL  +
Sbjct: 34  PLDMSQYKSLFCGSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAE 90


>Z81107-10|CAB03233.1|  646|Caenorhabditis elegans Hypothetical
           protein R07H5.2a protein.
          Length = 646

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 591 PLDMSQYKKIFGTCRIPWEKRDKLSYNNS-KHVTVIHNNHIFHVDVWGEDDILLSED 758
           PLDMSQYK +F   RIP +++D L  + S KH    +  H + V ++ +D  LL  +
Sbjct: 204 PLDMSQYKSLFCGSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAE 260



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +2

Query: 191 QNLPRLPVPKLETTLNKYL 247
           ++L RLP+PKL  T+N+YL
Sbjct: 40  KSLRRLPIPKLPDTVNRYL 58


>Z73103-12|CAJ90500.1|  476|Caenorhabditis elegans Hypothetical
           protein R07H5.2b protein.
          Length = 476

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 591 PLDMSQYKKIFGTCRIPWEKRDKLSYNNS-KHVTVIHNNHIFHVDVWGEDDILLSED 758
           PLDMSQYK +F   RIP +++D L  + S KH    +  H + V ++ +D  LL  +
Sbjct: 34  PLDMSQYKSLFCGSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAE 90


>Z73103-11|CAA97431.1|  646|Caenorhabditis elegans Hypothetical
           protein R07H5.2a protein.
          Length = 646

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 591 PLDMSQYKKIFGTCRIPWEKRDKLSYNNS-KHVTVIHNNHIFHVDVWGEDDILLSED 758
           PLDMSQYK +F   RIP +++D L  + S KH    +  H + V ++ +D  LL  +
Sbjct: 204 PLDMSQYKSLFCGSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAE 260



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +2

Query: 191 QNLPRLPVPKLETTLNKYL 247
           ++L RLP+PKL  T+N+YL
Sbjct: 40  KSLRRLPIPKLPDTVNRYL 58


>Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical
           protein F41E7.6 protein.
          Length = 557

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 26/70 (37%), Positives = 34/70 (48%)
 Frame = +1

Query: 259 PHLNDQEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVV 438
           P +   E E   +L  DF S    GQ LQ  L+ +     NWLE WW + AYL  RD  +
Sbjct: 33  PIVPKDELETITTLANDFASS-QNGQILQRFLKEKTISSKNWLEDWWYD-AYLTNRDS-L 89

Query: 439 IFSSPGLVFP 468
           +  + G V P
Sbjct: 90  LTQNMGAVVP 99



 Score = 34.7 bits (76), Expect = 0.072
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
 Frame = +3

Query: 537 YKALIDGDKIPVEMMGKNPLDMSQYKKIFGTCRIPWEKRDKLS-YNNSK-------HVTV 692
           Y +LI  +KI V     N  DM+Q   +F  CR+P   +D++  Y  ++       HV +
Sbjct: 122 YWSLIRQEKIEVTKSRGNSWDMNQDYNLFNACRVPALPKDRIKRYFRTEAEGKCPSHVII 181

Query: 693 IHNNHIFHVDVWGEDDILLS 752
           + N H++ ++   E+   L+
Sbjct: 182 LCNGHVWKLETTCENSKFLN 201



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = +2

Query: 194 NLPRLPVPKLETTLNKYLKTV 256
           +LP LP+P+LE T+ KYLK++
Sbjct: 11  SLPSLPLPELEETIGKYLKSL 31


>Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 579 MGKNPLDMSQYKKIFGTCRIPWEKRDKLSYN-NSKHVTVIHNNHIFHVDVWGEDDILLSE 755
           +G+  L    YK I+  CR+P ++ D   +N  SKHV ++H    + VD +  +  L S 
Sbjct: 263 VGEGLLSTRHYKNIYNGCRVPGKEIDHFQWNPPSKHVLLVHKGTWYKVDTFDRNGKLYSV 322

Query: 756 D 758
           D
Sbjct: 323 D 323


>Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 579 MGKNPLDMSQYKKIFGTCRIPWEKRDKLSYN-NSKHVTVIHNNHIFHVDVWGEDDILLSE 755
           +G+  L    YK I+  CR+P ++ D   +N  SKHV ++H    + VD +  +  L S 
Sbjct: 263 VGEGLLSTRHYKNIYNGCRVPGKEIDHFQWNPPSKHVLLVHKGTWYKVDTFDRNGKLYSV 322

Query: 756 D 758
           D
Sbjct: 323 D 323


>AL110485-26|CAB60359.3|  779|Caenorhabditis elegans Hypothetical
           protein Y46G5A.17 protein.
          Length = 779

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 19/65 (29%), Positives = 36/65 (55%)
 Frame = +1

Query: 256 RPHLNDQEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRDPV 435
           +P L+D+E++  + L + F      G++LQ  L  ++   SN++  WW    Y+  R P+
Sbjct: 192 KPILSDEEFQELEFLSERF--RKGVGRRLQRYLTLKSWFSSNYVTDWWEEFVYMRQRSPI 249

Query: 436 VIFSS 450
           +I S+
Sbjct: 250 MINSN 254



 Score = 37.1 bits (82), Expect = 0.014
 Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 585 KNPLDMSQYKKIFGTCRIPWEKRDK-LSYNNSKHVTV 692
           K P    QY+++F TCR+P E+ D+ L ++++KH+ V
Sbjct: 302 KVPFCTMQYERLFNTCRVPGEEVDRLLHWDDAKHIAV 338



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +2

Query: 197 LPRLPVPKLETTLNKYLKTVGLT*TIKNMK*LNHLSKTLSQKGV 328
           LPRLP+P L+ T+ K+L ++    + +  + L  LS+   +KGV
Sbjct: 172 LPRLPLPNLDDTVRKHLLSMKPILSDEEFQELEFLSERF-RKGV 214


>U64852-5|AAB04968.1|  746|Caenorhabditis elegans Hypothetical
           protein W01A11.5 protein.
          Length = 746

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 23/76 (30%), Positives = 39/76 (51%)
 Frame = +1

Query: 223 RDYIK*IFENSRPHLNDQEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWL 402
           +D I    ++ +  L++QEYEI      +F+   + G+KLQ      +    N++  +W 
Sbjct: 157 KDTISEYLDSMKHILSEQEYEIVAKQAHEFLE--NEGKKLQRYTWIYSLFTDNYVTSFWQ 214

Query: 403 NTAYLEYRDPVVIFSS 450
             AYL  R P++I SS
Sbjct: 215 KYAYLHGRYPLMINSS 230


>AF022981-11|AAG24207.1|  746|Caenorhabditis elegans Hypothetical
           protein W03F9.4 protein.
          Length = 746

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 546 LIDGDKIPVEMMGKNPLDMSQYKKIFGTCRIPWEKRDK-LSYNNSKHVTVIHNNHIFHVD 722
           +   +K+    +G  PL   QY + + T RIP E  DK +   ++KH+ V H    + +D
Sbjct: 259 IFKSEKMKPVSLGGIPLCAQQYAEYYRTLRIPHETSDKMIRLPDAKHIAVYHKGCWYKID 318

Query: 723 VW 728
           ++
Sbjct: 319 IF 320



 Score = 35.9 bits (79), Expect = 0.031
 Identities = 19/74 (25%), Positives = 34/74 (45%)
 Frame = +1

Query: 217 KARDYIK*IFENSRPHLNDQEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQW 396
           K  D +    +  +P L ++E+       ++F S  + G  LQ+ L  +     N+L  W
Sbjct: 152 KVEDTVAKYLQTMKPILGEKEFLELSEQAEEFKSTIAGG--LQNKLWMKWAVSKNYLSDW 209

Query: 397 WLNTAYLEYRDPVV 438
           W    Y+ YRD ++
Sbjct: 210 WKEVVYMRYRDSLI 223


>AC024798-1|AAK29914.3|  722|Caenorhabditis elegans Hypothetical
           protein Y48G9A.10 protein.
          Length = 722

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 579 MGKNPLDMSQYKKIFGTCRIPWEKRDKLSYNN-SKHVTVIHNNHIFHVDVWGEDDILLS 752
           +G   +    Y+ I+   R+P  + D   +N  S+H  V+H    + VD   ED  L S
Sbjct: 250 VGDGLMSTRHYRNIYNGSRVPGAEIDNFQWNPPSRHALVVHKGTWYKVDTCDEDGRLYS 308


>AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical
           protein Y113G7A.1 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 400 ATIVQASLNDVLLYFPINSVIFVQY 326
           A I+QAS+N  L   P+N+VI++ Y
Sbjct: 237 ALILQASVNTFLFIVPVNAVIYIVY 261


>AF125952-7|AAD14695.1|  352|Caenorhabditis elegans Seven tm
           receptor protein 258 protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
 Frame = -2

Query: 719 YMEYMIIMDDSDMLAIVI*QFITFFPRYSACSENFLILRHV---*RIFSHHFYWYFITIN 549
           + E  I++       I++    + FP+Y+AC+ N L +        I + HF + +++I 
Sbjct: 57  FAEKPIMLTKESAFLIIMNWRESIFPKYAACTLNLLFIGFFGMSVAILALHFIYRYLSIT 116

Query: 548 QCFVISSCQQCFGSYNNCSFLVLNCLNGKT 459
           +    S+  + F S+    + ++  LNG T
Sbjct: 117 K----SNLLKTFDSWKIVPWFMIPLLNGIT 142


>AC006722-13|AAK68415.2|  352|Caenorhabditis elegans Hypothetical
           protein Y19D10A.2 protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
 Frame = -2

Query: 719 YMEYMIIMDDSDMLAIVI*QFITFFPRYSACSENFLILRHV---*RIFSHHFYWYFITIN 549
           + E  I++       I++    + FP+Y+AC+ N L +        I + HF + +++I 
Sbjct: 57  FAEKPIMLTKESAFLIIMNWRESIFPKYAACTLNLLFIGFFGMSVAILALHFIYRYLSIT 116

Query: 548 QCFVISSCQQCFGSYNNCSFLVLNCLNGKT 459
           +    S+  + F S+    + ++  LNG T
Sbjct: 117 K----SNLLKTFDSWKIVPWFMIPLLNGIT 142


>U80846-2|AAC70887.3|  516|Caenorhabditis elegans Hypothetical
           protein K06A9.2 protein.
          Length = 516

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +1

Query: 262 HLNDQEYE-ITKSL-VKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRD 429
           HLN+   + I K L  KD +      + L+   +N         ++WW++  +  Y+D
Sbjct: 4   HLNELVLDYIGKQLNAKDLLRLSMANKALRGFFDNECYWQKLMFKRWWVDRKFFRYQD 61


>AF016438-9|AAB65891.2|  394|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 103 protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 594 LDMSQYKKIFGTCRIPWEKRDKLSYNNSKHVTVIHNNHIFHV 719
           LD +   +I  TC + W + DKLS   +K V    +N +  V
Sbjct: 202 LDENLKMEILKTCWVSWIRLDKLSETANKRVNATLDNSLLMV 243


>AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein6 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = -1

Query: 678 CYCYMTIYHVFPKVFCMFRKFSYIETCLEDFFPSFLLVFYHHQSVLCNQQLPTMFWLI 505
           CY  ++IY  F  V  M   F  ++  +   FP F   F     ++    LP +F +I
Sbjct: 81  CYTKVSIYTFFETVQAMIMLFLVVDILVIVKFPRFYHTFSTEWYIILALILPVIFGII 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,319,704
Number of Sequences: 27780
Number of extensions: 387427
Number of successful extensions: 1040
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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