BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00898 (759 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical pr... 77 2e-14 Z81593-1|CAB04738.1| 608|Caenorhabditis elegans Hypothetical pr... 55 5e-08 L08970-1|AAA53660.1| 627|Caenorhabditis elegans choline acetylt... 46 2e-05 L08969-1|AAA53659.1| 627|Caenorhabditis elegans choline acetylt... 46 2e-05 AF036701-3|AAB88370.1| 627|Caenorhabditis elegans Abnormal chol... 46 2e-05 Z81107-11|CAJ90502.1| 476|Caenorhabditis elegans Hypothetical p... 44 2e-04 Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical p... 44 2e-04 Z73103-12|CAJ90500.1| 476|Caenorhabditis elegans Hypothetical p... 44 2e-04 Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical p... 44 2e-04 Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 44 2e-04 Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 41 8e-04 Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 41 8e-04 AL110485-26|CAB60359.3| 779|Caenorhabditis elegans Hypothetical... 40 0.002 U64852-5|AAB04968.1| 746|Caenorhabditis elegans Hypothetical pr... 38 0.010 AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical... 37 0.014 AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical ... 33 0.17 AL132858-1|CAB60474.1| 325|Caenorhabditis elegans Hypothetical ... 30 2.1 AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm rece... 29 4.7 AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical... 29 4.7 U80846-2|AAC70887.3| 516|Caenorhabditis elegans Hypothetical pr... 28 6.3 AF016438-9|AAB65891.2| 394|Caenorhabditis elegans Nuclear hormo... 28 8.3 AC024881-3|AAK71413.1| 306|Caenorhabditis elegans Serpentine re... 28 8.3 >Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical protein B0395.3 protein. Length = 614 Score = 76.6 bits (180), Expect = 2e-14 Identities = 36/81 (44%), Positives = 51/81 (62%) Frame = +1 Query: 274 QEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSP 453 +E++ TK +V DF+ + KLQ LL+ RA+ NWL WWLN AYL R P+ + +SP Sbjct: 48 KEFQETKQIVNDFVVKDLP--KLQELLQKRADALPNWLTPWWLNIAYLAARTPLPVVTSP 105 Query: 454 GLVFPFRQFNTRKEQLLYEPK 516 G++FP +NT + QL Y K Sbjct: 106 GVMFPKFDYNTEEGQLEYAAK 126 Score = 56.4 bits (130), Expect = 2e-08 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%) Frame = +3 Query: 510 AKTLLAAADYKALIDGDKIPVEMMGKNPLDMSQYKKIFGTCRIPWEKRDKLSY-----NN 674 AK AA + +++ +M GK+PLDMSQY+ +FGT R+P D++ Y Sbjct: 125 AKISQAAVHFYLRAKNNQLKPDMAGKSPLDMSQYQFLFGTTRVPKVGVDEIRYGCDYKEK 184 Query: 675 SKHVTVIHNNHIFHVDVWGEDDILLS 752 +H+ VI N H+F V V ++ LS Sbjct: 185 LQHILVIRNGHLFRVQVLDSNEQPLS 210 >Z81593-1|CAB04738.1| 608|Caenorhabditis elegans Hypothetical protein T20B3.1 protein. Length = 608 Score = 55.2 bits (127), Expect = 5e-08 Identities = 24/42 (57%), Positives = 30/42 (71%) Frame = +1 Query: 331 GQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSPG 456 G +LQS LENRA++H NWLE WW N AY E R+P+ + S G Sbjct: 54 GAQLQSALENRAKNHKNWLEDWWYN-AYTEIREPLAPYVSFG 94 >L08970-1|AAA53660.1| 627|Caenorhabditis elegans choline acetyltransferase protein. Length = 627 Score = 46.4 bits (105), Expect = 2e-05 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +1 Query: 340 LQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSPGLVFPFRQFNTRKEQLLY 507 LQ L AE NW ++WL Y+ R P + S+PG +FP +F T+++ + Y Sbjct: 67 LQEQLLEIAEKSPNWATKFWLPEMYMRVRMPTPVNSNPGYIFPKVKFETKEDHIKY 122 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +2 Query: 197 LPRLPVPKLETTLNKYLK 250 LP+ PVP LE TL++YL+ Sbjct: 20 LPKPPVPSLEATLDRYLE 37 >L08969-1|AAA53659.1| 627|Caenorhabditis elegans choline acetyltransferase protein. Length = 627 Score = 46.4 bits (105), Expect = 2e-05 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +1 Query: 340 LQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSPGLVFPFRQFNTRKEQLLY 507 LQ L AE NW ++WL Y+ R P + S+PG +FP +F T+++ + Y Sbjct: 67 LQEQLLEIAEKSPNWATKFWLPEMYMRVRMPTPVNSNPGYIFPKVKFETKEDHIKY 122 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +2 Query: 197 LPRLPVPKLETTLNKYLK 250 LP+ PVP LE TL++YL+ Sbjct: 20 LPKPPVPSLEATLDRYLE 37 >AF036701-3|AAB88370.1| 627|Caenorhabditis elegans Abnormal choline acetyltransferaseprotein 1, isoform b protein. Length = 627 Score = 46.4 bits (105), Expect = 2e-05 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +1 Query: 340 LQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVVIFSSPGLVFPFRQFNTRKEQLLY 507 LQ L AE NW ++WL Y+ R P + S+PG +FP +F T+++ + Y Sbjct: 67 LQEQLLEIAEKSPNWATKFWLPEMYMRVRMPTPVNSNPGYIFPKVKFETKEDHIKY 122 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +2 Query: 197 LPRLPVPKLETTLNKYLK 250 LP+ PVP LE TL++YL+ Sbjct: 20 LPKPPVPSLEATLDRYLE 37 >Z81107-11|CAJ90502.1| 476|Caenorhabditis elegans Hypothetical protein R07H5.2b protein. Length = 476 Score = 43.6 bits (98), Expect = 2e-04 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 591 PLDMSQYKKIFGTCRIPWEKRDKLSYNNS-KHVTVIHNNHIFHVDVWGEDDILLSED 758 PLDMSQYK +F RIP +++D L + S KH + H + V ++ +D LL + Sbjct: 34 PLDMSQYKSLFCGSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAE 90 >Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical protein R07H5.2a protein. Length = 646 Score = 43.6 bits (98), Expect = 2e-04 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 591 PLDMSQYKKIFGTCRIPWEKRDKLSYNNS-KHVTVIHNNHIFHVDVWGEDDILLSED 758 PLDMSQYK +F RIP +++D L + S KH + H + V ++ +D LL + Sbjct: 204 PLDMSQYKSLFCGSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAE 260 Score = 29.1 bits (62), Expect = 3.6 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = +2 Query: 191 QNLPRLPVPKLETTLNKYL 247 ++L RLP+PKL T+N+YL Sbjct: 40 KSLRRLPIPKLPDTVNRYL 58 >Z73103-12|CAJ90500.1| 476|Caenorhabditis elegans Hypothetical protein R07H5.2b protein. Length = 476 Score = 43.6 bits (98), Expect = 2e-04 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 591 PLDMSQYKKIFGTCRIPWEKRDKLSYNNS-KHVTVIHNNHIFHVDVWGEDDILLSED 758 PLDMSQYK +F RIP +++D L + S KH + H + V ++ +D LL + Sbjct: 34 PLDMSQYKSLFCGSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAE 90 >Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical protein R07H5.2a protein. Length = 646 Score = 43.6 bits (98), Expect = 2e-04 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 591 PLDMSQYKKIFGTCRIPWEKRDKLSYNNS-KHVTVIHNNHIFHVDVWGEDDILLSED 758 PLDMSQYK +F RIP +++D L + S KH + H + V ++ +D LL + Sbjct: 204 PLDMSQYKSLFCGSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAE 260 Score = 29.1 bits (62), Expect = 3.6 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = +2 Query: 191 QNLPRLPVPKLETTLNKYL 247 ++L RLP+PKL T+N+YL Sbjct: 40 KSLRRLPIPKLPDTVNRYL 58 >Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical protein F41E7.6 protein. Length = 557 Score = 43.6 bits (98), Expect = 2e-04 Identities = 26/70 (37%), Positives = 34/70 (48%) Frame = +1 Query: 259 PHLNDQEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRDPVV 438 P + E E +L DF S GQ LQ L+ + NWLE WW + AYL RD + Sbjct: 33 PIVPKDELETITTLANDFASS-QNGQILQRFLKEKTISSKNWLEDWWYD-AYLTNRDS-L 89 Query: 439 IFSSPGLVFP 468 + + G V P Sbjct: 90 LTQNMGAVVP 99 Score = 34.7 bits (76), Expect = 0.072 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Frame = +3 Query: 537 YKALIDGDKIPVEMMGKNPLDMSQYKKIFGTCRIPWEKRDKLS-YNNSK-------HVTV 692 Y +LI +KI V N DM+Q +F CR+P +D++ Y ++ HV + Sbjct: 122 YWSLIRQEKIEVTKSRGNSWDMNQDYNLFNACRVPALPKDRIKRYFRTEAEGKCPSHVII 181 Query: 693 IHNNHIFHVDVWGEDDILLS 752 + N H++ ++ E+ L+ Sbjct: 182 LCNGHVWKLETTCENSKFLN 201 Score = 31.9 bits (69), Expect = 0.51 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = +2 Query: 194 NLPRLPVPKLETTLNKYLKTV 256 +LP LP+P+LE T+ KYLK++ Sbjct: 11 SLPSLPLPELEETIGKYLKSL 31 >Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical protein F09F3.9 protein. Length = 735 Score = 41.1 bits (92), Expect = 8e-04 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = +3 Query: 579 MGKNPLDMSQYKKIFGTCRIPWEKRDKLSYN-NSKHVTVIHNNHIFHVDVWGEDDILLSE 755 +G+ L YK I+ CR+P ++ D +N SKHV ++H + VD + + L S Sbjct: 263 VGEGLLSTRHYKNIYNGCRVPGKEIDHFQWNPPSKHVLLVHKGTWYKVDTFDRNGKLYSV 322 Query: 756 D 758 D Sbjct: 323 D 323 >Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical protein F09F3.9 protein. Length = 735 Score = 41.1 bits (92), Expect = 8e-04 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = +3 Query: 579 MGKNPLDMSQYKKIFGTCRIPWEKRDKLSYN-NSKHVTVIHNNHIFHVDVWGEDDILLSE 755 +G+ L YK I+ CR+P ++ D +N SKHV ++H + VD + + L S Sbjct: 263 VGEGLLSTRHYKNIYNGCRVPGKEIDHFQWNPPSKHVLLVHKGTWYKVDTFDRNGKLYSV 322 Query: 756 D 758 D Sbjct: 323 D 323 >AL110485-26|CAB60359.3| 779|Caenorhabditis elegans Hypothetical protein Y46G5A.17 protein. Length = 779 Score = 39.9 bits (89), Expect = 0.002 Identities = 19/65 (29%), Positives = 36/65 (55%) Frame = +1 Query: 256 RPHLNDQEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRDPV 435 +P L+D+E++ + L + F G++LQ L ++ SN++ WW Y+ R P+ Sbjct: 192 KPILSDEEFQELEFLSERF--RKGVGRRLQRYLTLKSWFSSNYVTDWWEEFVYMRQRSPI 249 Query: 436 VIFSS 450 +I S+ Sbjct: 250 MINSN 254 Score = 37.1 bits (82), Expect = 0.014 Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +3 Query: 585 KNPLDMSQYKKIFGTCRIPWEKRDK-LSYNNSKHVTV 692 K P QY+++F TCR+P E+ D+ L ++++KH+ V Sbjct: 302 KVPFCTMQYERLFNTCRVPGEEVDRLLHWDDAKHIAV 338 Score = 27.9 bits (59), Expect = 8.3 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = +2 Query: 197 LPRLPVPKLETTLNKYLKTVGLT*TIKNMK*LNHLSKTLSQKGV 328 LPRLP+P L+ T+ K+L ++ + + + L LS+ +KGV Sbjct: 172 LPRLPLPNLDDTVRKHLLSMKPILSDEEFQELEFLSERF-RKGV 214 >U64852-5|AAB04968.1| 746|Caenorhabditis elegans Hypothetical protein W01A11.5 protein. Length = 746 Score = 37.5 bits (83), Expect = 0.010 Identities = 23/76 (30%), Positives = 39/76 (51%) Frame = +1 Query: 223 RDYIK*IFENSRPHLNDQEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWL 402 +D I ++ + L++QEYEI +F+ + G+KLQ + N++ +W Sbjct: 157 KDTISEYLDSMKHILSEQEYEIVAKQAHEFLE--NEGKKLQRYTWIYSLFTDNYVTSFWQ 214 Query: 403 NTAYLEYRDPVVIFSS 450 AYL R P++I SS Sbjct: 215 KYAYLHGRYPLMINSS 230 >AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical protein W03F9.4 protein. Length = 746 Score = 37.1 bits (82), Expect = 0.014 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 546 LIDGDKIPVEMMGKNPLDMSQYKKIFGTCRIPWEKRDK-LSYNNSKHVTVIHNNHIFHVD 722 + +K+ +G PL QY + + T RIP E DK + ++KH+ V H + +D Sbjct: 259 IFKSEKMKPVSLGGIPLCAQQYAEYYRTLRIPHETSDKMIRLPDAKHIAVYHKGCWYKID 318 Query: 723 VW 728 ++ Sbjct: 319 IF 320 Score = 35.9 bits (79), Expect = 0.031 Identities = 19/74 (25%), Positives = 34/74 (45%) Frame = +1 Query: 217 KARDYIK*IFENSRPHLNDQEYEITKSLVKDFISEGSTGQKLQSLLENRAEHHSNWLEQW 396 K D + + +P L ++E+ ++F S + G LQ+ L + N+L W Sbjct: 152 KVEDTVAKYLQTMKPILGEKEFLELSEQAEEFKSTIAGG--LQNKLWMKWAVSKNYLSDW 209 Query: 397 WLNTAYLEYRDPVV 438 W Y+ YRD ++ Sbjct: 210 WKEVVYMRYRDSLI 223 >AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical protein Y48G9A.10 protein. Length = 722 Score = 33.5 bits (73), Expect = 0.17 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +3 Query: 579 MGKNPLDMSQYKKIFGTCRIPWEKRDKLSYNN-SKHVTVIHNNHIFHVDVWGEDDILLS 752 +G + Y+ I+ R+P + D +N S+H V+H + VD ED L S Sbjct: 250 VGDGLMSTRHYRNIYNGSRVPGAEIDNFQWNPPSRHALVVHKGTWYKVDTCDEDGRLYS 308 >AL132858-1|CAB60474.1| 325|Caenorhabditis elegans Hypothetical protein Y113G7A.1 protein. Length = 325 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -3 Query: 400 ATIVQASLNDVLLYFPINSVIFVQY 326 A I+QAS+N L P+N+VI++ Y Sbjct: 237 ALILQASVNTFLFIVPVNAVIYIVY 261 >AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm receptor protein 258 protein. Length = 352 Score = 28.7 bits (61), Expect = 4.7 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Frame = -2 Query: 719 YMEYMIIMDDSDMLAIVI*QFITFFPRYSACSENFLILRHV---*RIFSHHFYWYFITIN 549 + E I++ I++ + FP+Y+AC+ N L + I + HF + +++I Sbjct: 57 FAEKPIMLTKESAFLIIMNWRESIFPKYAACTLNLLFIGFFGMSVAILALHFIYRYLSIT 116 Query: 548 QCFVISSCQQCFGSYNNCSFLVLNCLNGKT 459 + S+ + F S+ + ++ LNG T Sbjct: 117 K----SNLLKTFDSWKIVPWFMIPLLNGIT 142 >AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical protein Y19D10A.2 protein. Length = 352 Score = 28.7 bits (61), Expect = 4.7 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Frame = -2 Query: 719 YMEYMIIMDDSDMLAIVI*QFITFFPRYSACSENFLILRHV---*RIFSHHFYWYFITIN 549 + E I++ I++ + FP+Y+AC+ N L + I + HF + +++I Sbjct: 57 FAEKPIMLTKESAFLIIMNWRESIFPKYAACTLNLLFIGFFGMSVAILALHFIYRYLSIT 116 Query: 548 QCFVISSCQQCFGSYNNCSFLVLNCLNGKT 459 + S+ + F S+ + ++ LNG T Sbjct: 117 K----SNLLKTFDSWKIVPWFMIPLLNGIT 142 >U80846-2|AAC70887.3| 516|Caenorhabditis elegans Hypothetical protein K06A9.2 protein. Length = 516 Score = 28.3 bits (60), Expect = 6.3 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +1 Query: 262 HLNDQEYE-ITKSL-VKDFISEGSTGQKLQSLLENRAEHHSNWLEQWWLNTAYLEYRD 429 HLN+ + I K L KD + + L+ +N ++WW++ + Y+D Sbjct: 4 HLNELVLDYIGKQLNAKDLLRLSMANKALRGFFDNECYWQKLMFKRWWVDRKFFRYQD 61 >AF016438-9|AAB65891.2| 394|Caenorhabditis elegans Nuclear hormone receptor familyprotein 103 protein. Length = 394 Score = 27.9 bits (59), Expect = 8.3 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +3 Query: 594 LDMSQYKKIFGTCRIPWEKRDKLSYNNSKHVTVIHNNHIFHV 719 LD + +I TC + W + DKLS +K V +N + V Sbjct: 202 LDENLKMEILKTCWVSWIRLDKLSETANKRVNATLDNSLLMV 243 >AC024881-3|AAK71413.1| 306|Caenorhabditis elegans Serpentine receptor, class sx protein6 protein. Length = 306 Score = 27.9 bits (59), Expect = 8.3 Identities = 16/58 (27%), Positives = 25/58 (43%) Frame = -1 Query: 678 CYCYMTIYHVFPKVFCMFRKFSYIETCLEDFFPSFLLVFYHHQSVLCNQQLPTMFWLI 505 CY ++IY F V M F ++ + FP F F ++ LP +F +I Sbjct: 81 CYTKVSIYTFFETVQAMIMLFLVVDILVIVKFPRFYHTFSTEWYIILALILPVIFGII 138 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,319,704 Number of Sequences: 27780 Number of extensions: 387427 Number of successful extensions: 1040 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 971 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1036 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1809061256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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