Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00895
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   6.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.1  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 106 YDFGEGDLSVVVSQTLQCAHVAAEFVGIVA 17
           Y +G G  +V       C H+   FVG+ A
Sbjct: 36  YRWGNGRFTVDHIDPYLCTHIIYSFVGLQA 65


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 187 IPVFIRVLV*RTSWSGTDGQSEEFPGEYD 101
           IP F+   V   +W G+DG        YD
Sbjct: 146 IPSFVADFVRVEAWVGSDGSLYNHTANYD 174


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -3

Query: 221 PLSAL*NRPRRD-TCIHQ 171
           PL A+ N+PR+D  C+ Q
Sbjct: 455 PLDAICNKPRKDAVCVSQ 472


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 277 VLAKLSPLREKIKQLADAGSK 339
           V+  +SP RE   Q+AD G K
Sbjct: 237 VVVIMSPTRELAIQIADQGKK 257


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 262 IGHNDVLAKLSPLREKIKQLADAGSKSQPEWFTKVLGL 375
           I H+D  AKL+ +R+   Q  +   ++  E+ T V+ L
Sbjct: 142 IEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNL 179


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 513 LQQQRNTSCTRSSTRYTE 566
           LQQQ+N S +R++T  T+
Sbjct: 186 LQQQQNKSASRTTTSPTK 203


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 59  KCLAHNNGQVAFTKVIFTRKFFG 127
           K L  +N Q +F KV+   + FG
Sbjct: 26  KSLGKHNLQKSFAKVVILAQIFG 48


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 59  KCLAHNNGQVAFTKVIFTRKFFG 127
           K L  +N Q +F KV+   + FG
Sbjct: 26  KSLGKHNLQKSFAKVVILAQIFG 48


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 59  KCLAHNNGQVAFTKVIFTRKFFG 127
           K L  +N Q +F KV+   + FG
Sbjct: 26  KSLGKHNLQKSFAKVVILAQIFG 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,004
Number of Sequences: 336
Number of extensions: 4048
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)