Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00893
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.62 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 242 LIYFIHTIKHSSLIFIVCVNYFVF 313
           +I+ IH + +  LI ++C+ YF +
Sbjct: 220 IIFTIHLLFYCVLIILLCIYYFYY 243



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 248 YFIHTIKHSSLIFIVCVNYFV 310
           Y+   I    L+F++C+ YFV
Sbjct: 117 YYAFIIFTVHLLFLLCIYYFV 137



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -1

Query: 291 TINIRLLCLIV*MKYMSFYIYVFFKFSV 208
           TI++   C+++ +  + ++ Y F  F+V
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTV 250


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 487 TPRNV*IQLFIFINNY 440
           TP  +  QLF+ I+NY
Sbjct: 592 TPEGMKSQLFVMISNY 607


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 103 LIHRCTYISMVCHFVVNYCFIY 38
           L+H+    S++  FVV+Y  +Y
Sbjct: 347 LLHQKVQFSVLGFFVVDYTLLY 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,819
Number of Sequences: 336
Number of extensions: 3368
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)